RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 VWC2Q2TAL6 325 aa12.96□□□□□ -0.34
SSRP1-202ENST00000293880 THAP8Q8NA92 274 aa12.96□□□□□ -0.34
SSRP1-202ENST00000293880 IGFBPL1Q8WX77 278 aa12.96□□□□□ -0.34
SSRP1-202ENST00000293880 OR11H6Q8NGC7 330 aa12.95□□□□□ -0.34
SSRP1-202ENST00000293880 MINOS1Q5TGZ0 78 aa12.95□□□□□ -0.34
SSRP1-202ENST00000293880 DTX1Q86Y01 620 aa12.95□□□□□ -0.34
SSRP1-202ENST00000293880 MINOS1-NBL1R4GNA1 71 aa12.95□□□□□ -0.34
SSRP1-202ENST00000293880 G3V318 75 aa12.95□□□□□ -0.34
SSRP1-202ENST00000293880 UTF1Q5T230 341 aa12.95□□□□□ -0.34
SSRP1-202ENST00000293880 C2orf66Q6UXQ4 117 aa12.95□□□□□ -0.34
SSRP1-202ENST00000293880 SIPA1L1O43166 1804 aa12.95□□□□□ -0.34
SSRP1-202ENST00000293880 IGKV3D-7A0A0C4DH55 119 aa12.95□□□□□ -0.34
SSRP1-202ENST00000293880 SPTSSBQ8NFR3 76 aa12.95□□□□□ -0.34
SSRP1-202ENST00000293880 RALGAPA1Q6GYQ0 2036 aa12.95□□□□□ -0.34
SSRP1-202ENST00000293880 PRSS47A8MTI9 375 aa12.95□□□□□ -0.34
SSRP1-202ENST00000293880 NDUFB8O95169 186 aa12.94□□□□□ -0.34
SSRP1-202ENST00000293880 Q8N8P6 123 aa12.94□□□□□ -0.34
SSRP1-202ENST00000293880 NKAPP1Q8N9T2 125 aa12.94□□□□□ -0.34
SSRP1-202ENST00000293880 SPATA25Q9BR10 227 aa12.94□□□□□ -0.34
SSRP1-202ENST00000293880 SHISA9B4DS77 424 aa12.94□□□□□ -0.34
SSRP1-202ENST00000293880 PRSS46E5RG02 174 aa12.94□□□□□ -0.34
SSRP1-202ENST00000293880 IGHV4-4A0A075B6R2 117 aa12.94□□□□□ -0.34
SSRP1-202ENST00000293880 IGKV1-6A0A0C4DH72 117 aa12.94□□□□□ -0.34
SSRP1-202ENST00000293880 SPRY2O43597 315 aa12.94□□□□□ -0.34
SSRP1-202ENST00000293880 TPSG1Q9NRR2 321 aa12.94□□□□□ -0.34
SSRP1-202ENST00000293880 COL4A6Q14031 1691 aa12.94□□□□□ -0.34
SSRP1-202ENST00000293880 PRR30Q53SZ7 412 aaPredicted RBP12.93□□□□□ -0.34
SSRP1-202ENST00000293880 DAZ1Q9NQZ3 744 aaKnown RBP12.93□□□□□ -0.34
SSRP1-202ENST00000293880 ZNRF2Q8NHG8 242 aa12.93□□□□□ -0.34
SSRP1-202ENST00000293880 TP53BP1Q12888 1972 aaPredicted RBP12.93□□□□□ -0.34
SSRP1-202ENST00000293880 M0R1W7 72 aa12.93□□□□□ -0.34
SSRP1-202ENST00000293880 EGR2P11161 476 aaPredicted RBP12.93□□□□□ -0.34
SSRP1-202ENST00000293880 CDKN1BP46527 198 aa12.93□□□□□ -0.34
SSRP1-202ENST00000293880 GATA4P43694 442 aa12.93□□□□□ -0.34
SSRP1-202ENST00000293880 RNF223E7ERA6 249 aa12.92□□□□□ -0.34
SSRP1-202ENST00000293880 PFN1P07737 140 aaKnown RBP12.92□□□□□ -0.34
SSRP1-202ENST00000293880 NTN3O00634 580 aaPredicted RBP12.92□□□□□ -0.34
SSRP1-202ENST00000293880 TRBV25-1A0A075B6N4 114 aa12.92□□□□□ -0.34
SSRP1-202ENST00000293880 CGB3P0DN86 165 aa12.92□□□□□ -0.34
SSRP1-202ENST00000293880 B3GALT5-AS1P59052 145 aa12.92□□□□□ -0.34
SSRP1-202ENST00000293880 Q0VG73 95 aa12.92□□□□□ -0.34
SSRP1-202ENST00000293880 FAM120AOSQ5T036 256 aa12.92□□□□□ -0.34
SSRP1-202ENST00000293880 MPDZO75970 2070 aa12.92□□□□□ -0.34
SSRP1-202ENST00000293880 CRYGCP07315 174 aa12.92□□□□□ -0.34
SSRP1-202ENST00000293880 FAM104BQ5XKR9 115 aa12.92□□□□□ -0.34
SSRP1-202ENST00000293880 CRIPAKQ8N1N5 446 aa12.92□□□□□ -0.34
SSRP1-202ENST00000293880 LYPD1Q8N2G4 141 aa12.92□□□□□ -0.34
SSRP1-202ENST00000293880 USMG5Q96IX5 58 aa12.92□□□□□ -0.34
SSRP1-202ENST00000293880 E7EQL1 145 aa12.91□□□□□ -0.34
SSRP1-202ENST00000293880 IGKV1-39P01597 117 aa12.91□□□□□ -0.34
SSRP1-202ENST00000293880 IGHG2P01859 326 aa12.91□□□□□ -0.34
SSRP1-202ENST00000293880 IGKV1D-39P04432 117 aa12.91□□□□□ -0.34
SSRP1-202ENST00000293880 TMEM141Q96I45 108 aa12.91□□□□□ -0.34
SSRP1-202ENST00000293880 CHKB-CPT1BH3BT56 60 aa12.91□□□□□ -0.34
SSRP1-202ENST00000293880 DKK2Q9UBU2 259 aa12.91□□□□□ -0.34
SSRP1-202ENST00000293880 MBD3L4A6NDZ8 208 aaPredicted RBP12.91□□□□□ -0.34
SSRP1-202ENST00000293880 MBD3L3A6NE82 208 aaPredicted RBP12.91□□□□□ -0.34
SSRP1-202ENST00000293880 MBD3L5A6NJ08 208 aaPredicted RBP12.91□□□□□ -0.34
SSRP1-202ENST00000293880 MBD3L2Q8NHZ7 208 aaPredicted RBP12.91□□□□□ -0.34
SSRP1-202ENST00000293880 SIGLEC8Q9NYZ4 499 aa12.91□□□□□ -0.34
SSRP1-202ENST00000293880 C8orf86Q6ZUL3 223 aa12.91□□□□□ -0.34
SSRP1-202ENST00000293880 PRO1854Q9UHT4 67 aa12.91□□□□□ -0.34
SSRP1-202ENST00000293880 B4DSR2 109 aa12.9□□□□□ -0.34
SSRP1-202ENST00000293880 V9GYV3 84 aa12.9□□□□□ -0.34
SSRP1-202ENST00000293880 SMIM27A0A1W2PRY6 76 aa12.9□□□□□ -0.34
SSRP1-202ENST00000293880 WIPF2Q8TF74 440 aaPredicted RBP12.9□□□□□ -0.34
SSRP1-202ENST00000293880 COX8AP10176 69 aa12.9□□□□□ -0.34
SSRP1-202ENST00000293880 HEATR1Q9H583 2144 aaKnown RBP12.9□□□□□ -0.34
SSRP1-202ENST00000293880 TEX48A0A1B0GUV7 120 aa12.9□□□□□ -0.34
SSRP1-202ENST00000293880 NPYP01303 97 aa12.9□□□□□ -0.34
SSRP1-202ENST00000293880 DIAPH2-AS1Q14236 149 aa12.9□□□□□ -0.34
SSRP1-202ENST00000293880 CACNA1IQ9P0X4 2223 aa12.9□□□□□ -0.34
SSRP1-202ENST00000293880 LINC01619G3V211 115 aa12.89□□□□□ -0.35
SSRP1-202ENST00000293880 WISP1O95388 367 aa12.89□□□□□ -0.35
SSRP1-202ENST00000293880 THADAQ6YHU6 1953 aa12.89□□□□□ -0.35
SSRP1-202ENST00000293880 ANK1P16157 1881 aa12.89□□□□□ -0.35
SSRP1-202ENST00000293880 ARTNQ5T4W7 220 aa12.89□□□□□ -0.35
SSRP1-202ENST00000293880 LINC01356Q8N9X3 169 aa12.89□□□□□ -0.35
SSRP1-202ENST00000293880 PKIGQ9Y2B9 76 aa12.89□□□□□ -0.35
SSRP1-202ENST00000293880 MRPL35Q9NZE8 188 aaKnown RBP12.89□□□□□ -0.35
SSRP1-202ENST00000293880 CMC4P56277 68 aaPredicted RBP12.89□□□□□ -0.35
SSRP1-202ENST00000293880 A0A1B0GX51 115 aa12.89□□□□□ -0.35
SSRP1-202ENST00000293880 RNASE8Q8TDE3 154 aaKnown RBP12.89□□□□□ -0.35
SSRP1-202ENST00000293880 MDS2Q8NDY4 140 aa12.88□□□□□ -0.35
SSRP1-202ENST00000293880 ESPL1Q14674 2120 aa12.88□□□□□ -0.35
SSRP1-202ENST00000293880 TRBV6-6A0A0A6YYG2 114 aa12.88□□□□□ -0.35
SSRP1-202ENST00000293880 FAM236AA0A1B0GUQ0 79 aa12.88□□□□□ -0.35
SSRP1-202ENST00000293880 FAM236BA0A1B0GV22 79 aa12.88□□□□□ -0.35
SSRP1-202ENST00000293880 PRSS29PA6NIE9 313 aa12.88□□□□□ -0.35
SSRP1-202ENST00000293880 DSCR9P59020 149 aa12.88□□□□□ -0.35
SSRP1-202ENST00000293880 C12orf74Q32Q52 190 aa12.88□□□□□ -0.35
SSRP1-202ENST00000293880 RNF5Q99942 180 aa12.88□□□□□ -0.35
SSRP1-202ENST00000293880 RTTNQ86VV8 2226 aa12.87□□□□□ -0.35
SSRP1-202ENST00000293880 SDHAF1A6NFY7 115 aa12.87□□□□□ -0.35
SSRP1-202ENST00000293880 FNDC10F2Z333 226 aa12.87□□□□□ -0.35
SSRP1-202ENST00000293880 HLA-DMBP28068 263 aa12.87□□□□□ -0.35
SSRP1-202ENST00000293880 MPLKIPQ8TAP9 179 aa12.87□□□□□ -0.35
SSRP1-202ENST00000293880 C17orf77Q96MU5 243 aa12.87□□□□□ -0.35
SSRP1-202ENST00000293880 ZNF492Q9P255 531 aa12.87□□□□□ -0.35
SSRP1-202ENST00000293880 CEP250Q9BV73 2442 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms