RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 KLF12Q9Y4X4 402 aa9.54□□□□□ -0.88
SYNGAP1-201ENST00000293748 IGHV1-3A0A0C4DH29 117 aa9.54□□□□□ -0.88
SYNGAP1-201ENST00000293748 LINC00158P58513 81 aa9.54□□□□□ -0.88
SYNGAP1-201ENST00000293748 DEFB113Q30KQ7 82 aa9.54□□□□□ -0.88
SYNGAP1-201ENST00000293748 PRR31Q5SQ13 230 aa9.54□□□□□ -0.88
SYNGAP1-201ENST00000293748 ZNF581Q9P0T4 197 aa9.54□□□□□ -0.88
SYNGAP1-201ENST00000293748 ADARB2-AS1A8MUL3 147 aa9.53□□□□□ -0.88
SYNGAP1-201ENST00000293748 C9JAW5 83 aa9.53□□□□□ -0.88
SYNGAP1-201ENST00000293748 PF4P02776 101 aa9.53□□□□□ -0.88
SYNGAP1-201ENST00000293748 COLCA1Q6ZS62 124 aa9.53□□□□□ -0.88
SYNGAP1-201ENST00000293748 FAM168AQ92567 244 aa9.53□□□□□ -0.88
SYNGAP1-201ENST00000293748 MCRIP2Q9BUT9 160 aaKnown RBP9.53□□□□□ -0.88
SYNGAP1-201ENST00000293748 ARMS2P0C7Q2 107 aa9.53□□□□□ -0.88
SYNGAP1-201ENST00000293748 PAX9P55771 341 aa9.53□□□□□ -0.88
SYNGAP1-201ENST00000293748 TMEM200BQ69YZ2 307 aa9.53□□□□□ -0.88
SYNGAP1-201ENST00000293748 ZCCHC24Q8N2G6 241 aaKnown RBP9.53□□□□□ -0.88
SYNGAP1-201ENST00000293748 METRNQ9UJH8 293 aa9.53□□□□□ -0.88
SYNGAP1-201ENST00000293748 SLAQ13239 276 aa9.53□□□□□ -0.88
SYNGAP1-201ENST00000293748 NEGR1Q7Z3B1 354 aa9.53□□□□□ -0.88
SYNGAP1-201ENST00000293748 LHFPL4Q7Z7J7 247 aa9.53□□□□□ -0.88
SYNGAP1-201ENST00000293748 LINC00479Q96M42 142 aa9.53□□□□□ -0.88
SYNGAP1-201ENST00000293748 C1orf147Q96MC9 270 aaPredicted RBP9.53□□□□□ -0.88
SYNGAP1-201ENST00000293748 SRSF8Q9BRL6 282 aaKnown RBP9.53□□□□□ -0.88
SYNGAP1-201ENST00000293748 IGSF10Q6WRI0 2623 aa9.53□□□□□ -0.88
SYNGAP1-201ENST00000293748 K7EP13 123 aa9.53□□□□□ -0.88
SYNGAP1-201ENST00000293748 Q8TAT8 98 aa9.53□□□□□ -0.88
SYNGAP1-201ENST00000293748 CSTL1Q9H114 145 aa9.53□□□□□ -0.88
SYNGAP1-201ENST00000293748 PKDREJQ9NTG1 2253 aa9.52□□□□□ -0.88
SYNGAP1-201ENST00000293748 IGKV1-6A0A0C4DH72 117 aa9.52□□□□□ -0.88
SYNGAP1-201ENST00000293748 VDAC2P45880 294 aaPredicted RBP9.52□□□□□ -0.88
SYNGAP1-201ENST00000293748 EFNA4P52798 201 aa9.52□□□□□ -0.88
SYNGAP1-201ENST00000293748 STHQ8IWL8 128 aa9.52□□□□□ -0.88
SYNGAP1-201ENST00000293748 PPDPFLQ8WWR9 84 aa9.52□□□□□ -0.88
SYNGAP1-201ENST00000293748 MYMXA0A1B0GTQ4 84 aa9.52□□□□□ -0.89
SYNGAP1-201ENST00000293748 E7EQL1 145 aa9.52□□□□□ -0.89
SYNGAP1-201ENST00000293748 COX8AP10176 69 aa9.52□□□□□ -0.89
SYNGAP1-201ENST00000293748 PHLDA1Q8WV24 401 aaPredicted RBP9.52□□□□□ -0.89
SYNGAP1-201ENST00000293748 SPANXDQ9BXN6 97 aa9.52□□□□□ -0.89
SYNGAP1-201ENST00000293748 SIGLEC9Q9Y336 463 aa9.52□□□□□ -0.89
SYNGAP1-201ENST00000293748 TRAV41A0A0B4J266 112 aa9.52□□□□□ -0.89
SYNGAP1-201ENST00000293748 SRRM4A7MD48 611 aaKnown RBP9.52□□□□□ -0.89
SYNGAP1-201ENST00000293748 F8W1H4 67 aa9.52□□□□□ -0.89
SYNGAP1-201ENST00000293748 PRB3Q04118 309 aaPredicted RBP9.52□□□□□ -0.89
SYNGAP1-201ENST00000293748 MINOS1Q5TGZ0 78 aa9.52□□□□□ -0.89
SYNGAP1-201ENST00000293748 LRRC75A-AS1Q8N1F1 130 aa9.52□□□□□ -0.89
SYNGAP1-201ENST00000293748 MINOS1-NBL1R4GNA1 71 aa9.52□□□□□ -0.89
SYNGAP1-201ENST00000293748 MED12LQ86YW9 2145 aa9.52□□□□□ -0.89
SYNGAP1-201ENST00000293748 IGLL1P15814 213 aa9.51□□□□□ -0.89
SYNGAP1-201ENST00000293748 HIST1H4AP62805 103 aaKnown RBP9.51□□□□□ -0.89
SYNGAP1-201ENST00000293748 C5orf64Q2M2E5 130 aa9.51□□□□□ -0.89
SYNGAP1-201ENST00000293748 SHANK2-AS3Q9BTD1 123 aa9.51□□□□□ -0.89
SYNGAP1-201ENST00000293748 PRSS22Q9GZN4 317 aa9.51□□□□□ -0.89
SYNGAP1-201ENST00000293748 KMT2BQ9UMN6 2715 aaPredicted RBP9.51□□□□□ -0.89
SYNGAP1-201ENST00000293748 NCKAP5O14513 1909 aa9.51□□□□□ -0.89
SYNGAP1-201ENST00000293748 SMKR1H3BMG3 65 aa9.51□□□□□ -0.89
SYNGAP1-201ENST00000293748 K7EP34 96 aa9.51□□□□□ -0.89
SYNGAP1-201ENST00000293748 FAM104BQ5XKR9 115 aa9.51□□□□□ -0.89
SYNGAP1-201ENST00000293748 GATD1Q8NB37 220 aa9.51□□□□□ -0.89
SYNGAP1-201ENST00000293748 TRGV4A0A0C4DH28 118 aa9.51□□□□□ -0.89
SYNGAP1-201ENST00000293748 LGALS9BQ3B8N2 356 aa9.51□□□□□ -0.89
SYNGAP1-201ENST00000293748 LGALS9CQ6DKI2 356 aa9.51□□□□□ -0.89
SYNGAP1-201ENST00000293748 DNAJC30Q96LL9 226 aa9.51□□□□□ -0.89
SYNGAP1-201ENST00000293748 CHCHD5Q9BSY4 110 aa9.51□□□□□ -0.89
SYNGAP1-201ENST00000293748 LSM4Q9Y4Z0 139 aaKnown RBP9.51□□□□□ -0.89
SYNGAP1-201ENST00000293748 DOPEY1Q5JWR5 2465 aa9.51□□□□□ -0.89
SYNGAP1-201ENST00000293748 WNT2P09544 360 aa9.51□□□□□ -0.89
SYNGAP1-201ENST00000293748 ZNF726P1Q15940 193 aa9.51□□□□□ -0.89
SYNGAP1-201ENST00000293748 ETDBQ3ZM63 59 aa9.51□□□□□ -0.89
SYNGAP1-201ENST00000293748 C14orf178Q8N769 122 aaPredicted RBP9.51□□□□□ -0.89
SYNGAP1-201ENST00000293748 LY6G5BQ8NDX9 201 aa9.51□□□□□ -0.89
SYNGAP1-201ENST00000293748 HS3ST6Q96QI5 342 aa9.51□□□□□ -0.89
SYNGAP1-201ENST00000293748 TSSC4Q9Y5U2 329 aaPredicted RBP9.51□□□□□ -0.89
SYNGAP1-201ENST00000293748 V9GYV3 84 aa9.51□□□□□ -0.89
SYNGAP1-201ENST00000293748 ANKHD1Q8IWZ3 2542 aaKnown RBP9.5□□□□□ -0.89
SYNGAP1-201ENST00000293748 TRAV40A0A0B4J280 105 aa9.5□□□□□ -0.89
SYNGAP1-201ENST00000293748 SHISA9B4DS77 424 aa9.5□□□□□ -0.89
SYNGAP1-201ENST00000293748 TMEM178BH3BS89 294 aa9.5□□□□□ -0.89
SYNGAP1-201ENST00000293748 PAX4O43316 350 aa9.5□□□□□ -0.89
SYNGAP1-201ENST00000293748 C11orf52Q96A22 123 aa9.5□□□□□ -0.89
SYNGAP1-201ENST00000293748 CHD6Q8TD26 2715 aa9.5□□□□□ -0.89
SYNGAP1-201ENST00000293748 RPL36AP83881 106 aaKnown RBP9.5□□□□□ -0.89
SYNGAP1-201ENST00000293748 ZNF295-AS1Q8N0V1 137 aa9.5□□□□□ -0.89
SYNGAP1-201ENST00000293748 RPL36ALQ969Q0 106 aaKnown RBP9.5□□□□□ -0.89
SYNGAP1-201ENST00000293748 TIMM21Q9BVV7 248 aa9.5□□□□□ -0.89
SYNGAP1-201ENST00000293748 PCNX3Q9H6A9 2034 aa9.5□□□□□ -0.89
SYNGAP1-201ENST00000293748 IGHV1-24A0A0C4DH33 117 aa9.5□□□□□ -0.89
SYNGAP1-201ENST00000293748 SLC25A16P16260 332 aa9.5□□□□□ -0.89
SYNGAP1-201ENST00000293748 TMEM75Q8N9X5 138 aa9.5□□□□□ -0.89
SYNGAP1-201ENST00000293748 DPH3Q96FX2 82 aa9.5□□□□□ -0.89
SYNGAP1-201ENST00000293748 JPT2Q9H910 190 aa9.5□□□□□ -0.89
SYNGAP1-201ENST00000293748 IGKV1D-17A0A075B6S4 117 aa9.49□□□□□ -0.89
SYNGAP1-201ENST00000293748 TRAV8-3A0A0A6YYJ7 113 aa9.49□□□□□ -0.89
SYNGAP1-201ENST00000293748 PRSS46E5RG02 174 aa9.49□□□□□ -0.89
SYNGAP1-201ENST00000293748 ARHGAP21Q5T5U3 1957 aa9.49□□□□□ -0.89
SYNGAP1-201ENST00000293748 TRBV7-1A0A0A6YYK4 115 aa9.49□□□□□ -0.89
SYNGAP1-201ENST00000293748 EDA2RQ9HAV5 297 aa9.49□□□□□ -0.89
SYNGAP1-201ENST00000293748 LYNX1G3V0Z9 82 aa9.49□□□□□ -0.89
SYNGAP1-201ENST00000293748 INAFM2P0DMQ5 153 aa9.49□□□□□ -0.89
SYNGAP1-201ENST00000293748 LYNX1P0DP58 116 aa9.49□□□□□ -0.89
SYNGAP1-201ENST00000293748 COA6Q5JTJ3 125 aaKnown RBP9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms