RNA–Protein interactions for RNA: ENST00000291547.9

PKNOX1-201, Transcript of PBX/knotted 1 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKNOX1, Length 5,003 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-201ENST00000291547 FAM104BQ5XKR9 115 aa8.68□□□□□ -1.02
PKNOX1-201ENST00000291547 SPRR3Q9UBC9 169 aa8.68□□□□□ -1.02
PKNOX1-201ENST00000291547 OOSP1A8MZH6 123 aa8.68□□□□□ -1.02
PKNOX1-201ENST00000291547 TRPT1Q86TN4 253 aaKnown RBP8.68□□□□□ -1.02
PKNOX1-201ENST00000291547 DOCK7Q96N67 2140 aa8.68□□□□□ -1.02
PKNOX1-201ENST00000291547 SHANK1Q9Y566 2161 aa8.68□□□□□ -1.02
PKNOX1-201ENST00000291547 KNCNA6PVL3 124 aa8.68□□□□□ -1.02
PKNOX1-201ENST00000291547 MYO7BQ6PIF6 2116 aa8.68□□□□□ -1.02
PKNOX1-201ENST00000291547 USF3Q68DE3 2245 aa8.68□□□□□ -1.02
PKNOX1-201ENST00000291547 TRAV12-1A0A0B4J245 112 aa8.68□□□□□ -1.02
PKNOX1-201ENST00000291547 TAX1BP3O14907 124 aa8.68□□□□□ -1.02
PKNOX1-201ENST00000291547 ZNF581Q9P0T4 197 aa8.68□□□□□ -1.02
PKNOX1-201ENST00000291547 TRBV6-6A0A0A6YYG2 114 aa8.67□□□□□ -1.02
PKNOX1-201ENST00000291547 H3BUX3 64 aa8.67□□□□□ -1.02
PKNOX1-201ENST00000291547 DEFB130BP0DP73 79 aa8.67□□□□□ -1.02
PKNOX1-201ENST00000291547 DEFB130AP0DP74 79 aa8.67□□□□□ -1.02
PKNOX1-201ENST00000291547 MINOS1Q5TGZ0 78 aa8.67□□□□□ -1.02
PKNOX1-201ENST00000291547 SHANK2-AS3Q9BTD1 123 aa8.67□□□□□ -1.02
PKNOX1-201ENST00000291547 MINOS1-NBL1R4GNA1 71 aa8.67□□□□□ -1.02
PKNOX1-201ENST00000291547 TTC28Q96AY4 2481 aa8.67□□□□□ -1.02
PKNOX1-201ENST00000291547 GAGE12JA6NER3 117 aa8.67□□□□□ -1.02
PKNOX1-201ENST00000291547 C22orf46C9J442 243 aa8.67□□□□□ -1.02
PKNOX1-201ENST00000291547 H3BMG7 143 aa8.67□□□□□ -1.02
PKNOX1-201ENST00000291547 PSCAO43653 123 aa8.67□□□□□ -1.02
PKNOX1-201ENST00000291547 GAGE7O76087 117 aa8.67□□□□□ -1.02
PKNOX1-201ENST00000291547 GAGE12FP0CL80 117 aa8.67□□□□□ -1.02
PKNOX1-201ENST00000291547 GAGE12GP0CL81 117 aa8.67□□□□□ -1.02
PKNOX1-201ENST00000291547 GAGE12IP0CL82 117 aa8.67□□□□□ -1.02
PKNOX1-201ENST00000291547 GAGE4Q13068 117 aa8.67□□□□□ -1.02
PKNOX1-201ENST00000291547 COX8AP10176 69 aa8.67□□□□□ -1.02
PKNOX1-201ENST00000291547 PIP4P2Q8N4L2 257 aa8.67□□□□□ -1.02
PKNOX1-201ENST00000291547 ZNF492Q9P255 531 aa8.67□□□□□ -1.02
PKNOX1-201ENST00000291547 DOCK11Q5JSL3 2073 aa8.67□□□□□ -1.02
PKNOX1-201ENST00000291547 TMEM178BH3BS89 294 aa8.66□□□□□ -1.02
PKNOX1-201ENST00000291547 NDUFB8O95169 186 aa8.66□□□□□ -1.02
PKNOX1-201ENST00000291547 PDE6HQ13956 83 aa8.66□□□□□ -1.02
PKNOX1-201ENST00000291547 QRFPP83859 136 aa8.66□□□□□ -1.02
PKNOX1-201ENST00000291547 RBM3P98179 157 aaKnown RBP8.66□□□□□ -1.02
PKNOX1-201ENST00000291547 BOD1L2Q8IYS8 172 aa8.66□□□□□ -1.02
PKNOX1-201ENST00000291547 OR11H6Q8NGC7 330 aa8.66□□□□□ -1.02
PKNOX1-201ENST00000291547 PRO1854Q9UHT4 67 aa8.66□□□□□ -1.02
PKNOX1-201ENST00000291547 FNDC10F2Z333 226 aa8.66□□□□□ -1.02
PKNOX1-201ENST00000291547 SIVA1O15304 175 aa8.66□□□□□ -1.02
PKNOX1-201ENST00000291547 DKK1O94907 266 aa8.66□□□□□ -1.02
PKNOX1-201ENST00000291547 AMTNQ6UX39 209 aa8.66□□□□□ -1.02
PKNOX1-201ENST00000291547 Q8N8P6 123 aa8.66□□□□□ -1.02
PKNOX1-201ENST00000291547 C1QTNF4Q9BXJ3 329 aa8.66□□□□□ -1.02
PKNOX1-201ENST00000291547 TRAV25A0A0B4J276 109 aa8.66□□□□□ -1.02
PKNOX1-201ENST00000291547 Q6P435 159 aa8.66□□□□□ -1.02
PKNOX1-201ENST00000291547 CYYR1Q96J86 154 aa8.66□□□□□ -1.02
PKNOX1-201ENST00000291547 SRSF8Q9BRL6 282 aaKnown RBP8.66□□□□□ -1.02
PKNOX1-201ENST00000291547 BRD3OSQ6XYD6 125 aa8.65□□□□□ -1.02
PKNOX1-201ENST00000291547 GGNQ86UU5 652 aa8.65□□□□□ -1.02
PKNOX1-201ENST00000291547 TMEM141Q96I45 108 aa8.65□□□□□ -1.02
PKNOX1-201ENST00000291547 MSRB2Q9Y3D2 182 aa8.65□□□□□ -1.02
PKNOX1-201ENST00000291547 IGHV1-24A0A0C4DH33 117 aa8.65□□□□□ -1.02
PKNOX1-201ENST00000291547 OVOL3O00110 214 aa8.65□□□□□ -1.02
PKNOX1-201ENST00000291547 IGKV1-16P04430 117 aa8.65□□□□□ -1.02
PKNOX1-201ENST00000291547 CARD19Q96LW7 228 aa8.65□□□□□ -1.02
PKNOX1-201ENST00000291547 NDUFA12Q9UI09 145 aa8.65□□□□□ -1.02
PKNOX1-201ENST00000291547 FER1L5A0AVI2 2057 aa8.65□□□□□ -1.02
PKNOX1-201ENST00000291547 PRSS46E5RG02 174 aa8.65□□□□□ -1.02
PKNOX1-201ENST00000291547 NXPH4O95158 308 aa8.65□□□□□ -1.02
PKNOX1-201ENST00000291547 USMG5Q96IX5 58 aa8.65□□□□□ -1.02
PKNOX1-201ENST00000291547 BUB1B-PAK6H3BSN5 160 aa8.65□□□□□ -1.03
PKNOX1-201ENST00000291547 PNRC2Q9NPJ4 139 aaKnown RBP8.65□□□□□ -1.03
PKNOX1-201ENST00000291547 MRPL35Q9NZE8 188 aaKnown RBP8.64□□□□□ -1.03
PKNOX1-201ENST00000291547 B5MCH6 92 aa8.64□□□□□ -1.03
PKNOX1-201ENST00000291547 E9PLN8 166 aa8.64□□□□□ -1.03
PKNOX1-201ENST00000291547 RS1O15537 224 aa8.64□□□□□ -1.03
PKNOX1-201ENST00000291547 CRLF1O75462 422 aa8.64□□□□□ -1.03
PKNOX1-201ENST00000291547 LGALS9BQ3B8N2 356 aa8.64□□□□□ -1.03
PKNOX1-201ENST00000291547 PLA2G2CQ5R387 149 aa8.64□□□□□ -1.03
PKNOX1-201ENST00000291547 LGALS9CQ6DKI2 356 aa8.64□□□□□ -1.03
PKNOX1-201ENST00000291547 LY6G6EA0A0G2JKS1 128 aa8.64□□□□□ -1.03
PKNOX1-201ENST00000291547 ETV2O00321 342 aaPredicted RBP8.64□□□□□ -1.03
PKNOX1-201ENST00000291547 IGHG3P01860 377 aa8.64□□□□□ -1.03
PKNOX1-201ENST00000291547 Q6ZS49 121 aa8.64□□□□□ -1.03
PKNOX1-201ENST00000291547 ANKRD29Q8N6D5 301 aa8.64□□□□□ -1.03
PKNOX1-201ENST00000291547 PLA2G2EQ9NZK7 142 aa8.64□□□□□ -1.03
PKNOX1-201ENST00000291547 U3KQA8 63 aa8.64□□□□□ -1.03
PKNOX1-201ENST00000291547 SDHAF1A6NFY7 115 aa8.64□□□□□ -1.03
PKNOX1-201ENST00000291547 K7ERJ3 54 aa8.64□□□□□ -1.03
PKNOX1-201ENST00000291547 RHODO00212 210 aa8.64□□□□□ -1.03
PKNOX1-201ENST00000291547 HOXD3P31249 432 aaPredicted RBP8.64□□□□□ -1.03
PKNOX1-201ENST00000291547 DEFB131AP59861 70 aa8.64□□□□□ -1.03
PKNOX1-201ENST00000291547 Q6ZVH6 145 aa8.64□□□□□ -1.03
PKNOX1-201ENST00000291547 DAZ1Q9NQZ3 744 aaKnown RBP8.64□□□□□ -1.03
PKNOX1-201ENST00000291547 PLXNB3Q9ULL4 1909 aa8.63□□□□□ -1.03
PKNOX1-201ENST00000291547 TINCRA0A1B0GVN0 87 aa8.63□□□□□ -1.03
PKNOX1-201ENST00000291547 TMEM258P61165 79 aa8.63□□□□□ -1.03
PKNOX1-201ENST00000291547 MRPL51Q4U2R6 128 aaKnown RBP8.63□□□□□ -1.03
PKNOX1-201ENST00000291547 C15orf53Q8NAA6 179 aa8.63□□□□□ -1.03
PKNOX1-201ENST00000291547 NTN5Q8WTR8 489 aaPredicted RBP8.63□□□□□ -1.03
PKNOX1-201ENST00000291547 MED13LQ71F56 2210 aa8.63□□□□□ -1.03
PKNOX1-201ENST00000291547 A0A1W2PPI3 338 aa8.63□□□□□ -1.03
PKNOX1-201ENST00000291547 ZNF561-AS1K7EIQ3 104 aa8.63□□□□□ -1.03
PKNOX1-201ENST00000291547 VWC2Q2TAL6 325 aa8.63□□□□□ -1.03
PKNOX1-201ENST00000291547 C20orf204Q6ZNR8 217 aa8.63□□□□□ -1.03
PKNOX1-201ENST00000291547 SMIM20Q8N5G0 67 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms