RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 IGHV4-28A0A0C4DH34 117 aa19.43■□□□□ 0.7
SSU72-201ENST00000291386 IGKV2D-40P01614 121 aaPredicted RBP19.43■□□□□ 0.7
SSU72-201ENST00000291386 FHITP49789 147 aa19.43■□□□□ 0.7
SSU72-201ENST00000291386 IL17DQ8TAD2 202 aa19.43■□□□□ 0.7
SSU72-201ENST00000291386 CMTM2Q8TAZ6 248 aa19.43■□□□□ 0.7
SSU72-201ENST00000291386 MBD3L1Q8WWY6 194 aa19.43■□□□□ 0.7
SSU72-201ENST00000291386 VGLL1Q99990 258 aa19.43■□□□□ 0.7
SSU72-201ENST00000291386 C20orf144Q9BQM9 153 aa19.43■□□□□ 0.7
SSU72-201ENST00000291386 A0A1W2PRE2 83 aa19.42■□□□□ 0.7
SSU72-201ENST00000291386 C3orf84H3BNL1 204 aa19.42■□□□□ 0.7
SSU72-201ENST00000291386 TMEM78Q5T7P6 136 aa19.42■□□□□ 0.7
SSU72-201ENST00000291386 ZNF492Q9P255 531 aa19.42■□□□□ 0.7
SSU72-201ENST00000291386 TRBV7-9A0A0J9YWB2 115 aa19.41■□□□□ 0.7
SSU72-201ENST00000291386 RBMY1A1P0DJD3 496 aaKnown RBP19.41■□□□□ 0.7
SSU72-201ENST00000291386 RBMY1CP0DJD4 496 aa19.41■□□□□ 0.7
SSU72-201ENST00000291386 FGF8P55075 233 aaPredicted RBP19.41■□□□□ 0.7
SSU72-201ENST00000291386 RBMY1FQ15415 496 aaKnown RBP19.41■□□□□ 0.7
SSU72-201ENST00000291386 TMEM256Q8N2U0 113 aa19.41■□□□□ 0.7
SSU72-201ENST00000291386 TMPRSS5Q9H3S3 457 aa19.41■□□□□ 0.7
SSU72-201ENST00000291386 IGHV3OR16-12A0A075B7B8 117 aa19.4■□□□□ 0.7
SSU72-201ENST00000291386 NMBP08949 121 aa19.4■□□□□ 0.7
SSU72-201ENST00000291386 CRISP2P16562 243 aa19.4■□□□□ 0.7
SSU72-201ENST00000291386 RAB5CP51148 216 aa19.4■□□□□ 0.7
SSU72-201ENST00000291386 C5orf17Q8NAS9 161 aa19.4■□□□□ 0.7
SSU72-201ENST00000291386 KLLNB2CW77 178 aa19.39■□□□□ 0.69
SSU72-201ENST00000291386 ZNF138P52744 262 aa19.39■□□□□ 0.69
SSU72-201ENST00000291386 IQCF2Q8IXL9 164 aa19.39■□□□□ 0.69
SSU72-201ENST00000291386 FAM213BQ8TBF2 198 aa19.39■□□□□ 0.69
SSU72-201ENST00000291386 TMEM208Q9BTX3 173 aa19.39■□□□□ 0.69
SSU72-201ENST00000291386 SERTM2A0A1B0GWG4 89 aa19.38■□□□□ 0.69
SSU72-201ENST00000291386 GGTLC3B5MD39 225 aa19.38■□□□□ 0.69
SSU72-201ENST00000291386 HBE1P02100 147 aa19.38■□□□□ 0.69
SSU72-201ENST00000291386 KIR3DS1Q14943 382 aa19.38■□□□□ 0.69
SSU72-201ENST00000291386 GFI1BQ5VTD9 330 aa19.38■□□□□ 0.69
SSU72-201ENST00000291386 LENEPQ9Y5L5 61 aa19.38■□□□□ 0.69
SSU72-201ENST00000291386 DEFB4AO15263 64 aa19.37■□□□□ 0.69
SSU72-201ENST00000291386 SUMO1P63165 101 aaKnown RBP19.37■□□□□ 0.69
SSU72-201ENST00000291386 NKX6-2Q9C056 277 aaPredicted RBP19.37■□□□□ 0.69
SSU72-201ENST00000291386 TMEM189A5PLL7 270 aa19.36■□□□□ 0.69
SSU72-201ENST00000291386 SULT1A2P50226 295 aa19.36■□□□□ 0.69
SSU72-201ENST00000291386 RRN3P1Q2M238 152 aa19.36■□□□□ 0.69
SSU72-201ENST00000291386 SFT2D1Q8WV19 159 aa19.36■□□□□ 0.69
SSU72-201ENST00000291386 ARL2-SNX15V9GYD0 113 aa19.36■□□□□ 0.69
SSU72-201ENST00000291386 H7BYZ3 331 aa19.35■□□□□ 0.69
SSU72-201ENST00000291386 TCRAP04437 139 aa19.35■□□□□ 0.69
SSU72-201ENST00000291386 H2AFB1P0C5Y9 115 aa19.35■□□□□ 0.69
SSU72-201ENST00000291386 GOLT1AQ6ZVE7 132 aa19.35■□□□□ 0.69
SSU72-201ENST00000291386 ZFAND2AQ8N6M9 145 aa19.35■□□□□ 0.69
SSU72-201ENST00000291386 YTHDF2Q9Y5A9 579 aaKnown RBP19.35■□□□□ 0.69
SSU72-201ENST00000291386 FAM74A7A6NL05 159 aa19.34■□□□□ 0.69
SSU72-201ENST00000291386 TAS2R60P59551 318 aa19.34■□□□□ 0.69
SSU72-201ENST00000291386 GNG5P63218 68 aa19.34■□□□□ 0.69
SSU72-201ENST00000291386 C11orf45Q8TAV5 145 aa19.34■□□□□ 0.69
SSU72-201ENST00000291386 LINC01587Q99440 93 aa19.34■□□□□ 0.69
SSU72-201ENST00000291386 EPDR1Q9UM22 224 aa19.34■□□□□ 0.69
SSU72-201ENST00000291386 RPH3ALQ9UNE2 315 aa19.34■□□□□ 0.69
SSU72-201ENST00000291386 C7orf71A4D174 169 aa19.33■□□□□ 0.68
SSU72-201ENST00000291386 Q8TAT8 98 aa19.33■□□□□ 0.68
SSU72-201ENST00000291386 J3KRW8 73 aa19.32■□□□□ 0.68
SSU72-201ENST00000291386 NKX2-5P52952 324 aaPredicted RBP19.32■□□□□ 0.68
SSU72-201ENST00000291386 UBE2G2P60604 165 aa19.32■□□□□ 0.68
SSU72-201ENST00000291386 CASC10Q5T4H9 136 aa19.32■□□□□ 0.68
SSU72-201ENST00000291386 TRAV1-1A0A0B4J248 108 aa19.31■□□□□ 0.68
SSU72-201ENST00000291386 LOC102723971A0A1B0GUV8 181 aa19.31■□□□□ 0.68
SSU72-201ENST00000291386 ZNF705GA8MUZ8 300 aaPredicted RBP19.31■□□□□ 0.68
SSU72-201ENST00000291386 K7EQM0 130 aa19.31■□□□□ 0.68
SSU72-201ENST00000291386 GPX1P07203 203 aa19.31■□□□□ 0.68
SSU72-201ENST00000291386 NIPSNAP3BQ9BS92 247 aa19.31■□□□□ 0.68
SSU72-201ENST00000291386 TRAV12-3A0A0B4J271 114 aa19.3■□□□□ 0.68
SSU72-201ENST00000291386 ZNF324O75467 553 aaPredicted RBP19.3■□□□□ 0.68
SSU72-201ENST00000291386 ATG101Q9BSB4 218 aa19.3■□□□□ 0.68
SSU72-201ENST00000291386 CSMD3Q7Z407 3707 aa19.29■□□□□ 0.68
SSU72-201ENST00000291386 FBLL1A6NHQ2 334 aaKnown RBP19.29■□□□□ 0.68
SSU72-201ENST00000291386 PPT1P50897 306 aa19.29■□□□□ 0.68
SSU72-201ENST00000291386 BTN1A1Q13410 526 aa19.29■□□□□ 0.68
SSU72-201ENST00000291386 PRR9Q5T870 116 aa19.29■□□□□ 0.68
SSU72-201ENST00000291386 CCDC28AQ8IWP9 274 aa19.29■□□□□ 0.68
SSU72-201ENST00000291386 CYB561D1Q8N8Q1 229 aa19.29■□□□□ 0.68
SSU72-201ENST00000291386 PYGO2Q9BRQ0 406 aa19.29■□□□□ 0.68
SSU72-201ENST00000291386 LINC00467Q9BRT7 94 aa19.29■□□□□ 0.68
SSU72-201ENST00000291386 TCEAL7Q9BRU2 100 aa19.29■□□□□ 0.68
SSU72-201ENST00000291386 TRAV8-1A0A0A6YYK1 113 aa19.28■□□□□ 0.68
SSU72-201ENST00000291386 RNASE4P34096 147 aaKnown RBP19.28■□□□□ 0.68
SSU72-201ENST00000291386 TMEM75Q8N9X5 138 aa19.28■□□□□ 0.68
SSU72-201ENST00000291386 HIST1H2BAQ96A08 127 aa19.28■□□□□ 0.68
SSU72-201ENST00000291386 CXorf65A6NEN9 183 aa19.27■□□□□ 0.68
SSU72-201ENST00000291386 IGLV2-11P01706 119 aa19.27■□□□□ 0.68
SSU72-201ENST00000291386 PRM2P04554 102 aa19.27■□□□□ 0.68
SSU72-201ENST00000291386 AZU1P20160 251 aa19.27■□□□□ 0.68
SSU72-201ENST00000291386 NANOS2P60321 138 aaKnown RBP19.27■□□□□ 0.68
SSU72-201ENST00000291386 ZFAND6Q6FIF0 208 aa19.27■□□□□ 0.68
SSU72-201ENST00000291386 ZNF493Q6ZR52 646 aa19.27■□□□□ 0.68
SSU72-201ENST00000291386 CELA1Q9UNI1 258 aa19.27■□□□□ 0.68
SSU72-201ENST00000291386 TEX48A0A1B0GUV7 120 aa19.26■□□□□ 0.67
SSU72-201ENST00000291386 IFNA7P01567 189 aa19.26■□□□□ 0.67
SSU72-201ENST00000291386 C16orf74Q96GX8 76 aa19.26■□□□□ 0.67
SSU72-201ENST00000291386 STARD9Q9P2P6 4700 aa19.25■□□□□ 0.67
SSU72-201ENST00000291386 A0A1B0GV50 99 aa19.25■□□□□ 0.67
SSU72-201ENST00000291386 PLAC8L1A1L4L8 177 aa19.25■□□□□ 0.67
SSU72-201ENST00000291386 TEX46H3BTG2 121 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms