RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 DUX5Q96PT3 197 aa9.12□□□□□ -0.95
NPC1L1-201ENST00000289547 ZNF503-AS2A6NEH8 195 aa9.12□□□□□ -0.95
NPC1L1-201ENST00000289547 Q71RC1 249 aaPredicted RBP9.12□□□□□ -0.95
NPC1L1-201ENST00000289547 ZC2HC1AQ96GY0 325 aa9.12□□□□□ -0.95
NPC1L1-201ENST00000289547 TMEM213A2RRL7 107 aa9.12□□□□□ -0.95
NPC1L1-201ENST00000289547 K7EN84 100 aa9.12□□□□□ -0.95
NPC1L1-201ENST00000289547 SH2D1AO60880 128 aa9.12□□□□□ -0.95
NPC1L1-201ENST00000289547 RNASE4P34096 147 aaKnown RBP9.12□□□□□ -0.95
NPC1L1-201ENST00000289547 C11orf52Q96A22 123 aa9.12□□□□□ -0.95
NPC1L1-201ENST00000289547 ZGRF1Q86YA3 2104 aa9.12□□□□□ -0.95
NPC1L1-201ENST00000289547 TAX1BP3O14907 124 aa9.12□□□□□ -0.95
NPC1L1-201ENST00000289547 SAA4P35542 130 aa9.12□□□□□ -0.95
NPC1L1-201ENST00000289547 NPC2P61916 151 aa9.12□□□□□ -0.95
NPC1L1-201ENST00000289547 PRB3Q04118 309 aaPredicted RBP9.12□□□□□ -0.95
NPC1L1-201ENST00000289547 Q6ZR03 302 aa9.12□□□□□ -0.95
NPC1L1-201ENST00000289547 Q86TA4 180 aa9.12□□□□□ -0.95
NPC1L1-201ENST00000289547 Q8TAT8 98 aa9.12□□□□□ -0.95
NPC1L1-201ENST00000289547 TMEM101Q96IK0 257 aa9.12□□□□□ -0.95
NPC1L1-201ENST00000289547 ABCA4P78363 2273 aa9.11□□□□□ -0.95
NPC1L1-201ENST00000289547 FAM231DQ6ZW35 169 aa9.11□□□□□ -0.95
NPC1L1-201ENST00000289547 DTX2Q86UW9 622 aa9.11□□□□□ -0.95
NPC1L1-201ENST00000289547 TOMM7Q9P0U1 55 aa9.11□□□□□ -0.95
NPC1L1-201ENST00000289547 TRBV20-1A0A075B6N2 111 aa9.11□□□□□ -0.95
NPC1L1-201ENST00000289547 BUB1B-PAK6H3BSN5 160 aa9.11□□□□□ -0.95
NPC1L1-201ENST00000289547 RHOGP84095 191 aa9.11□□□□□ -0.95
NPC1L1-201ENST00000289547 TRAV26-1A0A087WT03 109 aa9.11□□□□□ -0.95
NPC1L1-201ENST00000289547 TRAV8-3A0A0A6YYJ7 113 aa9.11□□□□□ -0.95
NPC1L1-201ENST00000289547 IGHV1-3A0A0C4DH29 117 aa9.11□□□□□ -0.95
NPC1L1-201ENST00000289547 C10orf105Q8TEF2 133 aa9.11□□□□□ -0.95
NPC1L1-201ENST00000289547 IGHV3OR16-12A0A075B7B8 117 aa9.1□□□□□ -0.95
NPC1L1-201ENST00000289547 TRAV41A0A0B4J266 112 aa9.1□□□□□ -0.95
NPC1L1-201ENST00000289547 IGLC1P0CG04 106 aa9.1□□□□□ -0.95
NPC1L1-201ENST00000289547 CNTFRP26992 372 aa9.1□□□□□ -0.95
NPC1L1-201ENST00000289547 RNASE2P10153 161 aaKnown RBP9.1□□□□□ -0.95
NPC1L1-201ENST00000289547 SNRPD3P62318 126 aaKnown RBP9.1□□□□□ -0.95
NPC1L1-201ENST00000289547 CT83Q5H943 113 aa9.1□□□□□ -0.95
NPC1L1-201ENST00000289547 TRGV9Q99603 122 aa9.1□□□□□ -0.95
NPC1L1-201ENST00000289547 SLC50A1Q9BRV3 221 aa9.1□□□□□ -0.95
NPC1L1-201ENST00000289547 C1QTNF4Q9BXJ3 329 aa9.1□□□□□ -0.95
NPC1L1-201ENST00000289547 ZNF492Q9P255 531 aa9.1□□□□□ -0.95
NPC1L1-201ENST00000289547 KAAG1Q9UBP8 84 aa9.1□□□□□ -0.95
NPC1L1-201ENST00000289547 HIST1H4AP62805 103 aaKnown RBP9.1□□□□□ -0.95
NPC1L1-201ENST00000289547 Q8NFD4 153 aa9.1□□□□□ -0.95
NPC1L1-201ENST00000289547 GLMPQ8WWB7 406 aa9.1□□□□□ -0.95
NPC1L1-201ENST00000289547 FAM104BQ5XKR9 115 aa9.09□□□□□ -0.95
NPC1L1-201ENST00000289547 FNDC10F2Z333 226 aa9.09□□□□□ -0.95
NPC1L1-201ENST00000289547 CLEC19AQ6UXS0 136 aa9.09□□□□□ -0.95
NPC1L1-201ENST00000289547 CEND1Q8N111 149 aa9.09□□□□□ -0.95
NPC1L1-201ENST00000289547 RNF166Q96A37 237 aaPredicted RBP9.09□□□□□ -0.95
NPC1L1-201ENST00000289547 PCP2Q8IVA1 136 aa9.09□□□□□ -0.95
NPC1L1-201ENST00000289547 ZNF688P0C7X2 276 aa9.08□□□□□ -0.96
NPC1L1-201ENST00000289547 TMEM219Q86XT9 240 aa9.08□□□□□ -0.96
NPC1L1-201ENST00000289547 IGHV4-30-2A0A087WSY4 118 aa9.08□□□□□ -0.96
NPC1L1-201ENST00000289547 TRAV21A0A0B4J279 112 aa9.08□□□□□ -0.96
NPC1L1-201ENST00000289547 SIVA1O15304 175 aa9.08□□□□□ -0.96
NPC1L1-201ENST00000289547 ZNF747Q9BV97 191 aa9.08□□□□□ -0.96
NPC1L1-201ENST00000289547 CD7P09564 240 aa9.08□□□□□ -0.96
NPC1L1-201ENST00000289547 C12orf74Q32Q52 190 aa9.08□□□□□ -0.96
NPC1L1-201ENST00000289547 LINC00173Q6ZV60 143 aa9.08□□□□□ -0.96
NPC1L1-201ENST00000289547 SIGLEC8Q9NYZ4 499 aa9.08□□□□□ -0.96
NPC1L1-201ENST00000289547 H3BMM0 161 aa9.08□□□□□ -0.96
NPC1L1-201ENST00000289547 CD28P10747 220 aa9.08□□□□□ -0.96
NPC1L1-201ENST00000289547 CRYBA4P53673 196 aa9.08□□□□□ -0.96
NPC1L1-201ENST00000289547 RBX1P62877 108 aa9.08□□□□□ -0.96
NPC1L1-201ENST00000289547 UBE2WQ96B02 151 aa9.08□□□□□ -0.96
NPC1L1-201ENST00000289547 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.07□□□□□ -0.961e-6■■■□□ 16.8
NPC1L1-201ENST00000289547 NDUFS7O75251 213 aa9.07□□□□□ -0.96
NPC1L1-201ENST00000289547 RUSC1-AS1Q66K80 236 aa9.07□□□□□ -0.96
NPC1L1-201ENST00000289547 BOD1L2Q8IYS8 172 aa9.07□□□□□ -0.96
NPC1L1-201ENST00000289547 DKK2Q9UBU2 259 aa9.07□□□□□ -0.96
NPC1L1-201ENST00000289547 NCOR2Q9Y618 2525 aa9.07□□□□□ -0.96
NPC1L1-201ENST00000289547 WFDC2Q14508 124 aa9.07□□□□□ -0.96
NPC1L1-201ENST00000289547 TMEM167AQ8TBQ9 72 aa9.07□□□□□ -0.96
NPC1L1-201ENST00000289547 PLEKHB2Q96CS7 222 aa9.07□□□□□ -0.96
NPC1L1-201ENST00000289547 C19orf84I3L1E1 186 aa9.07□□□□□ -0.96
NPC1L1-201ENST00000289547 IGHV3-11P01762 117 aa9.07□□□□□ -0.96
NPC1L1-201ENST00000289547 CMC4P56277 68 aaPredicted RBP9.07□□□□□ -0.96
NPC1L1-201ENST00000289547 MRPL35Q9NZE8 188 aaKnown RBP9.07□□□□□ -0.96
NPC1L1-201ENST00000289547 MED13LQ71F56 2210 aa9.06□□□□□ -0.96
NPC1L1-201ENST00000289547 LMO1P25800 156 aa9.06□□□□□ -0.96
NPC1L1-201ENST00000289547 C11orf44Q8N8P7 122 aa9.06□□□□□ -0.96
NPC1L1-201ENST00000289547 NRGNQ92686 78 aa9.06□□□□□ -0.96
NPC1L1-201ENST00000289547 PTPRQQ9UMZ3 2332 aa9.06□□□□□ -0.96
NPC1L1-201ENST00000289547 IGHV4-61A0A0C4DH41 118 aa9.06□□□□□ -0.96
NPC1L1-201ENST00000289547 G3V4G9 280 aa9.06□□□□□ -0.96
NPC1L1-201ENST00000289547 PAX1P15863 534 aa9.06□□□□□ -0.96
NPC1L1-201ENST00000289547 IGFL4Q6B9Z1 124 aa9.06□□□□□ -0.96
NPC1L1-201ENST00000289547 C11orf68Q9H3H3 251 aaKnown RBP9.06□□□□□ -0.96
NPC1L1-201ENST00000289547 COL4A2P08572 1712 aa9.06□□□□□ -0.96
NPC1L1-201ENST00000289547 IGKV1-16P04430 117 aa9.06□□□□□ -0.96
NPC1L1-201ENST00000289547 KLF5Q13887 457 aaPredicted RBP9.06□□□□□ -0.96
NPC1L1-201ENST00000289547 MRPL51Q4U2R6 128 aaKnown RBP9.06□□□□□ -0.96
NPC1L1-201ENST00000289547 ANKRD39Q53RE8 183 aa9.06□□□□□ -0.96
NPC1L1-201ENST00000289547 ATRXP46100 2492 aa9.06□□□□□ -0.96
NPC1L1-201ENST00000289547 OR11H6Q8NGC7 330 aa9.06□□□□□ -0.96
NPC1L1-201ENST00000289547 ARHGAP21Q5T5U3 1957 aa9.05□□□□□ -0.96
NPC1L1-201ENST00000289547 MYMXA0A1B0GTQ4 84 aa9.05□□□□□ -0.96
NPC1L1-201ENST00000289547 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.05□□□□□ -0.96
NPC1L1-201ENST00000289547 LOXP28300 417 aaPredicted RBP9.05□□□□□ -0.96
NPC1L1-201ENST00000289547 RBMY1BA6NDE4 496 aaKnown RBP9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms