RNA–Protein interactions for RNA: ENST00000288139.9

CACNA1D-201, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CACNA1D, Length 9,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-201ENST00000288139 FOXA3P55318 350 aaPredicted RBP6.88□□□□□ -1.31
CACNA1D-201ENST00000288139 IGHV3-64A0A075B6Q5 118 aa6.88□□□□□ -1.31
CACNA1D-201ENST00000288139 TMEM178BH3BS89 294 aa6.88□□□□□ -1.31
CACNA1D-201ENST00000288139 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.88□□□□□ -1.31
CACNA1D-201ENST00000288139 ZIC3O60481 467 aa6.88□□□□□ -1.31
CACNA1D-201ENST00000288139 C9orf139Q6ZV77 190 aa6.88□□□□□ -1.31
CACNA1D-201ENST00000288139 LINC00477Q96M19 166 aa6.88□□□□□ -1.31
CACNA1D-201ENST00000288139 LY6G5BQ8NDX9 201 aa6.88□□□□□ -1.31
CACNA1D-201ENST00000288139 C9JQL5 133 aa6.88□□□□□ -1.31
CACNA1D-201ENST00000288139 IGHG2P01859 326 aa6.88□□□□□ -1.31
CACNA1D-201ENST00000288139 MDKP21741 143 aaPredicted RBP6.88□□□□□ -1.31
CACNA1D-201ENST00000288139 SCRT2Q9NQ03 307 aa6.88□□□□□ -1.31
CACNA1D-201ENST00000288139 GUSBP1Q15486 140 aa6.88□□□□□ -1.31
CACNA1D-201ENST00000288139 GATA3P23771 443 aa6.87□□□□□ -1.31
CACNA1D-201ENST00000288139 Q6ZWC4 215 aa6.87□□□□□ -1.31
CACNA1D-201ENST00000288139 C17orf82Q86X59 251 aaPredicted RBP6.87□□□□□ -1.31
CACNA1D-201ENST00000288139 DEFB125Q8N687 156 aa6.87□□□□□ -1.31
CACNA1D-201ENST00000288139 FNDC4Q9H6D8 234 aaPredicted RBP6.87□□□□□ -1.31
CACNA1D-201ENST00000288139 TRPT1Q86TN4 253 aaKnown RBP6.87□□□□□ -1.31
CACNA1D-201ENST00000288139 MAJINQ3KP22 176 aa6.87□□□□□ -1.31
CACNA1D-201ENST00000288139 FAM19A2Q8N3H0 131 aa6.87□□□□□ -1.31
CACNA1D-201ENST00000288139 LYZL4Q96KX0 146 aa6.87□□□□□ -1.31
CACNA1D-201ENST00000288139 F6UB75 175 aa6.87□□□□□ -1.31
CACNA1D-201ENST00000288139 SAA2P0DJI9 122 aaPredicted RBP6.87□□□□□ -1.31
CACNA1D-201ENST00000288139 PEAR1Q5VY43 1037 aaPredicted RBP6.87□□□□□ -1.31
CACNA1D-201ENST00000288139 NABP1Q96AH0 204 aa6.87□□□□□ -1.31
CACNA1D-201ENST00000288139 IGHV3-35A0A0C4DH35 117 aa6.87□□□□□ -1.31
CACNA1D-201ENST00000288139 NUP35Q8NFH5 326 aa6.87□□□□□ -1.31
CACNA1D-201ENST00000288139 IGKV1D-13A0A0B4J2D9 117 aa6.87□□□□□ -1.31
CACNA1D-201ENST00000288139 ETDCA0A1B0GVM5 59 aa6.87□□□□□ -1.31
CACNA1D-201ENST00000288139 SPAARA0A1B0GVQ0 90 aa6.87□□□□□ -1.31
CACNA1D-201ENST00000288139 SNRPCP09234 159 aaKnown RBP6.87□□□□□ -1.31
CACNA1D-201ENST00000288139 IGKV1-13P0DP09 117 aa6.87□□□□□ -1.31
CACNA1D-201ENST00000288139 HLA-DMBP28068 263 aa6.87□□□□□ -1.31
CACNA1D-201ENST00000288139 NPC2P61916 151 aa6.87□□□□□ -1.31
CACNA1D-201ENST00000288139 PNRC2Q9NPJ4 139 aaKnown RBP6.87□□□□□ -1.31
CACNA1D-201ENST00000288139 PATE4P0C8F1 98 aa6.87□□□□□ -1.31
CACNA1D-201ENST00000288139 MUC21Q5SSG8 566 aa6.87□□□□□ -1.31
CACNA1D-201ENST00000288139 IGHV3OR16-13A0A075B7E8 117 aa6.87□□□□□ -1.31
CACNA1D-201ENST00000288139 IGHV3-74A0A0B4J1X5 117 aa6.87□□□□□ -1.31
CACNA1D-201ENST00000288139 CRIPAKQ8N1N5 446 aa6.87□□□□□ -1.31
CACNA1D-201ENST00000288139 JMJD1CQ15652 2540 aa6.86□□□□□ -1.31
CACNA1D-201ENST00000288139 IGKV1-5P01602 117 aa6.86□□□□□ -1.31
CACNA1D-201ENST00000288139 SPATA12Q7Z6I5 190 aa6.86□□□□□ -1.31
CACNA1D-201ENST00000288139 SAP25Q8TEE9 199 aa6.86□□□□□ -1.31
CACNA1D-201ENST00000288139 HLA-DRB4P13762 266 aa6.86□□□□□ -1.31
CACNA1D-201ENST00000288139 TPRX1Q8N7U7 411 aa6.86□□□□□ -1.31
CACNA1D-201ENST00000288139 C1orf147Q96MC9 270 aaPredicted RBP6.86□□□□□ -1.31
CACNA1D-201ENST00000288139 HLA-DRB4X5D2U9 266 aa6.86□□□□□ -1.31
CACNA1D-201ENST00000288139 CHD9Q3L8U1 2897 aa6.86□□□□□ -1.31
CACNA1D-201ENST00000288139 ZNF876PQ49A33 203 aa6.86□□□□□ -1.31
CACNA1D-201ENST00000288139 MINOS1Q5TGZ0 78 aa6.86□□□□□ -1.31
CACNA1D-201ENST00000288139 RNASE7Q9H1E1 156 aaKnown RBP6.86□□□□□ -1.31
CACNA1D-201ENST00000288139 MINOS1-NBL1R4GNA1 71 aa6.86□□□□□ -1.31
CACNA1D-201ENST00000288139 IGLL5B9A064 214 aa6.86□□□□□ -1.31
CACNA1D-201ENST00000288139 UBE2AP49459 152 aa6.86□□□□□ -1.31
CACNA1D-201ENST00000288139 SIGLEC8Q9NYZ4 499 aa6.86□□□□□ -1.31
CACNA1D-201ENST00000288139 PSG3Q16557 428 aa6.86□□□□□ -1.31
CACNA1D-201ENST00000288139 MUSTN1Q8IVN3 82 aa6.86□□□□□ -1.31
CACNA1D-201ENST00000288139 C15orf53Q8NAA6 179 aa6.86□□□□□ -1.31
CACNA1D-201ENST00000288139 A0A1W2PR77 199 aa6.85□□□□□ -1.31
CACNA1D-201ENST00000288139 PRSS46E5RG02 174 aa6.85□□□□□ -1.31
CACNA1D-201ENST00000288139 FOXG1P55316 489 aaPredicted RBP6.85□□□□□ -1.31
CACNA1D-201ENST00000288139 BSPH1Q075Z2 132 aa6.85□□□□□ -1.31
CACNA1D-201ENST00000288139 IGKV4-1P06312 121 aa6.85□□□□□ -1.31
CACNA1D-201ENST00000288139 IFITM1P13164 125 aa6.85□□□□□ -1.31
CACNA1D-201ENST00000288139 TIRAPP58753 221 aa6.85□□□□□ -1.31
CACNA1D-201ENST00000288139 SMIM20Q8N5G0 67 aa6.85□□□□□ -1.31
CACNA1D-201ENST00000288139 TMEM133Q9H2Q1 129 aa6.85□□□□□ -1.31
CACNA1D-201ENST00000288139 POLQO75417 2590 aa6.85□□□□□ -1.31
CACNA1D-201ENST00000288139 ZCCHC24Q8N2G6 241 aaKnown RBP6.85□□□□□ -1.31
CACNA1D-201ENST00000288139 C20orf78Q9BR46 151 aa6.85□□□□□ -1.31
CACNA1D-201ENST00000288139 LIME1Q9H400 295 aa6.85□□□□□ -1.31
CACNA1D-201ENST00000288139 SPINK8P0C7L1 97 aa6.85□□□□□ -1.31
CACNA1D-201ENST00000288139 MIR17HGQ75NE6 70 aa6.85□□□□□ -1.31
CACNA1D-201ENST00000288139 SPTSSBQ8NFR3 76 aa6.85□□□□□ -1.31
CACNA1D-201ENST00000288139 PSG8Q9UQ74 426 aa6.85□□□□□ -1.31
CACNA1D-201ENST00000288139 DEFB130BP0DP73 79 aa6.85□□□□□ -1.31
CACNA1D-201ENST00000288139 DEFB130AP0DP74 79 aa6.85□□□□□ -1.31
CACNA1D-201ENST00000288139 COL5A1P20908 1838 aaPredicted RBP6.85□□□□□ -1.31
CACNA1D-201ENST00000288139 PRTN3P24158 256 aa6.85□□□□□ -1.31
CACNA1D-201ENST00000288139 CCL18P55774 89 aa6.85□□□□□ -1.31
CACNA1D-201ENST00000288139 AMN1Q8IY45 258 aa6.85□□□□□ -1.31
CACNA1D-201ENST00000288139 TIMM17AQ99595 171 aa6.85□□□□□ -1.31
CACNA1D-201ENST00000288139 B4DSR2 109 aa6.85□□□□□ -1.31
CACNA1D-201ENST00000288139 C1QCP02747 245 aa6.85□□□□□ -1.31
CACNA1D-201ENST00000288139 C14orf177Q52M58 125 aa6.85□□□□□ -1.31
CACNA1D-201ENST00000288139 BVES-AS1Q5T3Y7 98 aa6.85□□□□□ -1.31
CACNA1D-201ENST00000288139 IGHV3-23P01764 117 aa6.84□□□□□ -1.31
CACNA1D-201ENST00000288139 RSPO4Q2I0M5 234 aaPredicted RBP6.84□□□□□ -1.31
CACNA1D-201ENST00000288139 Q86TA4 180 aa6.84□□□□□ -1.31
CACNA1D-201ENST00000288139 THSD7BQ9C0I4 1608 aa6.84□□□□□ -1.31
CACNA1D-201ENST00000288139 FAM223BA6NKX1 122 aa6.84□□□□□ -1.31
CACNA1D-201ENST00000288139 RS1O15537 224 aa6.84□□□□□ -1.31
CACNA1D-201ENST00000288139 PSG7Q13046 419 aa6.84□□□□□ -1.31
CACNA1D-201ENST00000288139 FHL1Q13642 323 aa6.84□□□□□ -1.31
CACNA1D-201ENST00000288139 Q6ZSR3 168 aa6.84□□□□□ -1.31
CACNA1D-201ENST00000288139 FAM223AQ8IWN6 122 aa6.84□□□□□ -1.31
CACNA1D-201ENST00000288139 SRXN1Q9BYN0 137 aa6.84□□□□□ -1.31
CACNA1D-201ENST00000288139 A0A1W2PPM0 123 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms