RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 ZNF738Q8NE65 137 aa14.13□□□□□ -0.15
PDLIM3-202ENST00000284770 TRBV6-1A0A0K0K1D8 114 aa14.12□□□□□ -0.15
PDLIM3-202ENST00000284770 K7EQM0 130 aa14.12□□□□□ -0.15
PDLIM3-202ENST00000284770 PSMG4Q5JS54 123 aa14.12□□□□□ -0.15
PDLIM3-202ENST00000284770 TRRAPQ9Y4A5 3859 aa14.12□□□□□ -0.15
PDLIM3-202ENST00000284770 LTAP01374 205 aa14.11□□□□□ -0.15
PDLIM3-202ENST00000284770 IGLL1P15814 213 aa14.11□□□□□ -0.15
PDLIM3-202ENST00000284770 RNF212Q495C1 297 aa14.11□□□□□ -0.15
PDLIM3-202ENST00000284770 Q86TA4 180 aa14.11□□□□□ -0.15
PDLIM3-202ENST00000284770 BAGE2Q86Y30 109 aa14.11□□□□□ -0.15
PDLIM3-202ENST00000284770 MLST8Q9BVC4 326 aa14.11□□□□□ -0.15
PDLIM3-202ENST00000284770 IGKV2-40A0A087WW87 121 aaPredicted RBP14.1□□□□□ -0.15
PDLIM3-202ENST00000284770 RBAKDNA6NC62 111 aa14.1□□□□□ -0.15
PDLIM3-202ENST00000284770 WIPF1O43516 503 aa14.1□□□□□ -0.15
PDLIM3-202ENST00000284770 IGKV2D-40P01614 121 aaPredicted RBP14.1□□□□□ -0.15
PDLIM3-202ENST00000284770 NHLRC2Q8NBF2 726 aa14.1□□□□□ -0.15
PDLIM3-202ENST00000284770 SMIM12Q96EX1 92 aa14.1□□□□□ -0.15
PDLIM3-202ENST00000284770 GCGP01275 180 aa14.09□□□□□ -0.15
PDLIM3-202ENST00000284770 FLI1Q01543 452 aaPredicted RBP14.09□□□□□ -0.15
PDLIM3-202ENST00000284770 PRR31Q5SQ13 230 aa14.09□□□□□ -0.15
PDLIM3-202ENST00000284770 SMCO4Q9NRQ5 59 aa14.09□□□□□ -0.15
PDLIM3-202ENST00000284770 TMEM242Q9NWH2 141 aa14.09□□□□□ -0.15
PDLIM3-202ENST00000284770 MT-ND4LP03901 98 aa14.09□□□□□ -0.15
PDLIM3-202ENST00000284770 OR5I1Q13606 314 aa14.09□□□□□ -0.15
PDLIM3-202ENST00000284770 BEAN1Q3B7T3 259 aa14.09□□□□□ -0.15
PDLIM3-202ENST00000284770 SFRP2Q96HF1 295 aa14.09□□□□□ -0.15
PDLIM3-202ENST00000284770 VGLL1Q99990 258 aa14.09□□□□□ -0.15
PDLIM3-202ENST00000284770 PSG8Q9UQ74 426 aa14.09□□□□□ -0.15
PDLIM3-202ENST00000284770 DEFB131AP59861 70 aa14.08□□□□□ -0.16
PDLIM3-202ENST00000284770 DEFB1P60022 68 aa14.08□□□□□ -0.16
PDLIM3-202ENST00000284770 PRNTQ86SH4 94 aa14.08□□□□□ -0.16
PDLIM3-202ENST00000284770 CTDSP1Q9GZU7 261 aa14.08□□□□□ -0.16
PDLIM3-202ENST00000284770 TUBA4BQ9H853 241 aa14.08□□□□□ -0.16
PDLIM3-202ENST00000284770 MAP6D1Q9H9H5 199 aa14.08□□□□□ -0.16
PDLIM3-202ENST00000284770 FBLL1A6NHQ2 334 aaKnown RBP14.07□□□□□ -0.16
PDLIM3-202ENST00000284770 F6UB75 175 aa14.07□□□□□ -0.16
PDLIM3-202ENST00000284770 C9orf47Q6ZRZ4 202 aa14.07□□□□□ -0.16
PDLIM3-202ENST00000284770 OR8A1Q8NGG7 326 aa14.07□□□□□ -0.16
PDLIM3-202ENST00000284770 OR10J6PQ8NGY7 276 aa14.07□□□□□ -0.16
PDLIM3-202ENST00000284770 ANAPC16Q96DE5 110 aa14.07□□□□□ -0.16
PDLIM3-202ENST00000284770 GPR61Q9BZJ8 451 aa14.07□□□□□ -0.16
PDLIM3-202ENST00000284770 ZNF705DP0CH99 300 aaPredicted RBP14.06□□□□□ -0.16
PDLIM3-202ENST00000284770 ZNF705BP0CI00 300 aaPredicted RBP14.06□□□□□ -0.16
PDLIM3-202ENST00000284770 MGST1P10620 155 aaKnown RBP14.06□□□□□ -0.16
PDLIM3-202ENST00000284770 CMC4P56277 68 aaPredicted RBP14.06□□□□□ -0.16
PDLIM3-202ENST00000284770 ODF3L2Q3SX64 289 aa14.06□□□□□ -0.16
PDLIM3-202ENST00000284770 TMEM183AQ8IXX5 376 aa14.06□□□□□ -0.16
PDLIM3-202ENST00000284770 AGPAT4-IT1Q9H0P7 198 aa14.06□□□□□ -0.16
PDLIM3-202ENST00000284770 ZFP30Q9Y2G7 519 aa14.06□□□□□ -0.16
PDLIM3-202ENST00000284770 ERCC8Q13216 396 aa14.06□□□□□ -0.16
PDLIM3-202ENST00000284770 KRTAP21-3Q3LHN1 58 aa14.06□□□□□ -0.16
PDLIM3-202ENST00000284770 FAM110AQ9BQ89 295 aa14.06□□□□□ -0.16
PDLIM3-202ENST00000284770 SORL1Q92673 2214 aa14.06□□□□□ -0.16
PDLIM3-202ENST00000284770 A0A0J9YX75 114 aa14.05□□□□□ -0.16
PDLIM3-202ENST00000284770 CXorf65A6NEN9 183 aa14.05□□□□□ -0.16
PDLIM3-202ENST00000284770 HIST1H1AQ02539 215 aaPredicted RBP14.05□□□□□ -0.16
PDLIM3-202ENST00000284770 TMEM78Q5T7P6 136 aa14.05□□□□□ -0.16
PDLIM3-202ENST00000284770 GDF5OSQ5U4N7 250 aa14.05□□□□□ -0.16
PDLIM3-202ENST00000284770 EBLN2Q6P2I7 272 aa14.05□□□□□ -0.16
PDLIM3-202ENST00000284770 FOXI2Q6ZQN5 318 aa14.05□□□□□ -0.16
PDLIM3-202ENST00000284770 LINC00477Q96M19 166 aa14.05□□□□□ -0.16
PDLIM3-202ENST00000284770 SAV1Q9H4B6 383 aaPredicted RBP14.05□□□□□ -0.16
PDLIM3-202ENST00000284770 ANK2Q01484 3957 aa14.05□□□□□ -0.16
PDLIM3-202ENST00000284770 NOTCH3Q9UM47 2321 aa14.05□□□□□ -0.16
PDLIM3-202ENST00000284770 OR11H12B2RN74 326 aa14.04□□□□□ -0.16
PDLIM3-202ENST00000284770 NPIPB6E9PJ23 425 aa14.04□□□□□ -0.16
PDLIM3-202ENST00000284770 H7BYZ3 331 aa14.04□□□□□ -0.16
PDLIM3-202ENST00000284770 YPEL4Q96NS1 127 aa14.04□□□□□ -0.16
PDLIM3-202ENST00000284770 ASCL2Q99929 193 aa14.04□□□□□ -0.16
PDLIM3-202ENST00000284770 PPP1R14DQ9NXH3 145 aa14.04□□□□□ -0.16
PDLIM3-202ENST00000284770 PPP1R2P9O14990 202 aa14.04□□□□□ -0.16
PDLIM3-202ENST00000284770 CD7P09564 240 aa14.04□□□□□ -0.16
PDLIM3-202ENST00000284770 OXLD1Q5BKU9 147 aa14.04□□□□□ -0.16
PDLIM3-202ENST00000284770 OR10G8Q8NGN5 311 aa14.04□□□□□ -0.16
PDLIM3-202ENST00000284770 RNASE7Q9H1E1 156 aaKnown RBP14.04□□□□□ -0.16
PDLIM3-202ENST00000284770 OSTCQ9NRP0 149 aa14.04□□□□□ -0.16
PDLIM3-202ENST00000284770 ZNF138P52744 262 aa14.03□□□□□ -0.16
PDLIM3-202ENST00000284770 ERVFC1-1P60608 527 aa14.03□□□□□ -0.16
PDLIM3-202ENST00000284770 FAM231DQ6ZW35 169 aa14.03□□□□□ -0.16
PDLIM3-202ENST00000284770 COX8CQ7Z4L0 72 aa14.03□□□□□ -0.16
PDLIM3-202ENST00000284770 APRG1Q8IVJ8 170 aa14.03□□□□□ -0.16
PDLIM3-202ENST00000284770 Q8TAT8 98 aa14.03□□□□□ -0.16
PDLIM3-202ENST00000284770 ZNF492Q9P255 531 aa14.03□□□□□ -0.16
PDLIM3-202ENST00000284770 ZNF124Q15973 351 aa14.02□□□□□ -0.16
PDLIM3-202ENST00000284770 IBA57Q5T440 356 aaKnown RBP14.02□□□□□ -0.16
PDLIM3-202ENST00000284770 LINC00322Q6ZN03 302 aaPredicted RBP14.02□□□□□ -0.16
PDLIM3-202ENST00000284770 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.02□□□□□ -0.16
PDLIM3-202ENST00000284770 ZC2HC1AQ96GY0 325 aa14.02□□□□□ -0.16
PDLIM3-202ENST00000284770 PRR25Q96S07 402 aa14.02□□□□□ -0.16
PDLIM3-202ENST00000284770 C19orf73Q9NVV2 129 aa14.02□□□□□ -0.16
PDLIM3-202ENST00000284770 V9GYV3 84 aa14.02□□□□□ -0.16
PDLIM3-202ENST00000284770 KNCNA6PVL3 124 aa14.01□□□□□ -0.17
PDLIM3-202ENST00000284770 DUSP14O95147 198 aaKnown RBP14.01□□□□□ -0.17
PDLIM3-202ENST00000284770 ACTL10Q5JWF8 245 aa14.01□□□□□ -0.17
PDLIM3-202ENST00000284770 SAPCD1Q5SSQ6 148 aa14.01□□□□□ -0.17
PDLIM3-202ENST00000284770 C8orf49Q96NF6 230 aa14.01□□□□□ -0.17
PDLIM3-202ENST00000284770 C19orf71A6NCJ1 209 aa14.01□□□□□ -0.17
PDLIM3-202ENST00000284770 COLCA2A8K830 154 aa14.01□□□□□ -0.17
PDLIM3-202ENST00000284770 CT45A10P0DMU9 189 aa14.01□□□□□ -0.17
PDLIM3-202ENST00000284770 HLA-DRB4P13762 266 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms