RNA–Protein interactions for RNA: ENST00000284073.6

MSI2-201, Transcript of musashi RNA binding protein 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene MSI2, Length 6,364 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-201ENST00000284073 SDHAF1A6NFY7 115 aa12.68□□□□□ -0.38
MSI2-201ENST00000284073 J3QQQ9 107 aa12.68□□□□□ -0.38
MSI2-201ENST00000284073 TAX1BP3O14907 124 aa12.68□□□□□ -0.38
MSI2-201ENST00000284073 SUMO4Q6EEV6 95 aa12.68□□□□□ -0.38
MSI2-201ENST00000284073 UCNP55089 124 aa12.68□□□□□ -0.38
MSI2-201ENST00000284073 ANKRD39Q53RE8 183 aa12.68□□□□□ -0.38
MSI2-201ENST00000284073 FAM120AOSQ5T036 256 aa12.68□□□□□ -0.38
MSI2-201ENST00000284073 PRR25Q96S07 402 aa12.68□□□□□ -0.38
MSI2-201ENST00000284073 NDUFA4L2Q9NRX3 87 aa12.67□□□□□ -0.38
MSI2-201ENST00000284073 SYNJ2BPP57105 145 aa12.67□□□□□ -0.38
MSI2-201ENST00000284073 RHPN1-AS1Q9BWJ2 59 aa12.67□□□□□ -0.38
MSI2-201ENST00000284073 TRBV7-1A0A0A6YYK4 115 aa12.67□□□□□ -0.38
MSI2-201ENST00000284073 IGHV3-16A0A0C4DH30 117 aa12.67□□□□□ -0.38
MSI2-201ENST00000284073 IGLV3-19P01714 112 aa12.67□□□□□ -0.38
MSI2-201ENST00000284073 THBDP07204 575 aa12.67□□□□□ -0.38
MSI2-201ENST00000284073 KLF5Q13887 457 aaPredicted RBP12.67□□□□□ -0.38
MSI2-201ENST00000284073 ZNF672Q499Z4 452 aaPredicted RBP12.67□□□□□ -0.38
MSI2-201ENST00000284073 RBMY1FQ15415 496 aaKnown RBP12.67□□□□□ -0.38
MSI2-201ENST00000284073 PYGO2Q9BRQ0 406 aa12.67□□□□□ -0.38
MSI2-201ENST00000284073 RALGAPA2Q2PPJ7 1873 aa12.66□□□□□ -0.38
MSI2-201ENST00000284073 TRBV25-1A0A075B6N4 114 aa12.66□□□□□ -0.38
MSI2-201ENST00000284073 MRPL23Q16540 153 aaKnown RBP12.66□□□□□ -0.38
MSI2-201ENST00000284073 RNF5Q99942 180 aa12.66□□□□□ -0.38
MSI2-201ENST00000284073 PRSS22Q9GZN4 317 aa12.66□□□□□ -0.38
MSI2-201ENST00000284073 EP300Q09472 2414 aaPredicted RBP12.66□□□□□ -0.38
MSI2-201ENST00000284073 CFC1BP0CG36 223 aa12.66□□□□□ -0.38
MSI2-201ENST00000284073 CFC1P0CG37 223 aa12.66□□□□□ -0.38
MSI2-201ENST00000284073 SCN10AQ9Y5Y9 1956 aa12.66□□□□□ -0.38
MSI2-201ENST00000284073 RNASE13Q5GAN3 156 aaKnown RBP12.66□□□□□ -0.38
MSI2-201ENST00000284073 FOXI2Q6ZQN5 318 aa12.66□□□□□ -0.38
MSI2-201ENST00000284073 FXYD5Q96DB9 178 aa12.66□□□□□ -0.38
MSI2-201ENST00000284073 SMIM2Q9BVW6 85 aa12.66□□□□□ -0.38
MSI2-201ENST00000284073 SCRT2Q9NQ03 307 aa12.66□□□□□ -0.38
MSI2-201ENST00000284073 FOXL2NBQ6ZUU3 175 aa12.66□□□□□ -0.38
MSI2-201ENST00000284073 MSRB2Q9Y3D2 182 aa12.65□□□□□ -0.38
MSI2-201ENST00000284073 SPTBN2O15020 2390 aa12.65□□□□□ -0.38
MSI2-201ENST00000284073 MYLKQ15746 1914 aa12.65□□□□□ -0.38
MSI2-201ENST00000284073 KLK9Q9UKQ9 250 aa12.65□□□□□ -0.38
MSI2-201ENST00000284073 IGHV3-38A0A0C4DH36 116 aa12.65□□□□□ -0.38
MSI2-201ENST00000284073 C8orf86Q6ZUL3 223 aa12.65□□□□□ -0.38
MSI2-201ENST00000284073 DOCK6Q96HP0 2047 aa12.65□□□□□ -0.38
MSI2-201ENST00000284073 COL11A2P13942 1736 aaPredicted RBP12.65□□□□□ -0.38
MSI2-201ENST00000284073 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.65□□□□□ -0.39
MSI2-201ENST00000284073 BRCA1P38398 1863 aaKnown RBP12.64□□□□□ -0.39
MSI2-201ENST00000284073 I3L3M4 83 aa12.64□□□□□ -0.39
MSI2-201ENST00000284073 NXPH4O95158 308 aa12.64□□□□□ -0.39
MSI2-201ENST00000284073 IGHG4P01861 327 aa12.64□□□□□ -0.39
MSI2-201ENST00000284073 ZNF524Q96C55 264 aa12.64□□□□□ -0.39
MSI2-201ENST00000284073 SPANXDQ9BXN6 97 aa12.64□□□□□ -0.39
MSI2-201ENST00000284073 GREB1LQ9C091 1923 aaPredicted RBP12.64□□□□□ -0.39
MSI2-201ENST00000284073 TTTY13Q9BZ97 58 aa12.64□□□□□ -0.39
MSI2-201ENST00000284073 FXYD2P54710 66 aa12.63□□□□□ -0.39
MSI2-201ENST00000284073 BRD3OSQ6XYD6 125 aa12.63□□□□□ -0.39
MSI2-201ENST00000284073 SSC4DQ8WTU2 575 aa12.63□□□□□ -0.39
MSI2-201ENST00000284073 G3V4G9 280 aa12.63□□□□□ -0.39
MSI2-201ENST00000284073 B3GALT5-AS1P59052 145 aa12.63□□□□□ -0.39
MSI2-201ENST00000284073 Q0VFX4 171 aa12.63□□□□□ -0.39
MSI2-201ENST00000284073 HEATR5AQ86XA9 2040 aa12.63□□□□□ -0.39
MSI2-201ENST00000284073 NTN3O00634 580 aaPredicted RBP12.63□□□□□ -0.39
MSI2-201ENST00000284073 NDUFB8O95169 186 aa12.63□□□□□ -0.39
MSI2-201ENST00000284073 RPL35AP18077 110 aaKnown RBP12.63□□□□□ -0.39
MSI2-201ENST00000284073 SHANK1Q9Y566 2161 aa12.62□□□□□ -0.39
MSI2-201ENST00000284073 GATA1P15976 413 aaPredicted RBP12.62□□□□□ -0.39
MSI2-201ENST00000284073 LTBRP36941 435 aa12.62□□□□□ -0.39
MSI2-201ENST00000284073 CRLF1O75462 422 aa12.62□□□□□ -0.39
MSI2-201ENST00000284073 WT1-ASQ06250 92 aa12.62□□□□□ -0.39
MSI2-201ENST00000284073 COL5A3P25940 1745 aaPredicted RBP12.62□□□□□ -0.39
MSI2-201ENST00000284073 OVOL3O00110 214 aa12.62□□□□□ -0.39
MSI2-201ENST00000284073 F8WEM9 126 aa12.62□□□□□ -0.39
MSI2-201ENST00000284073 SPINK13Q1W4C9 94 aa12.62□□□□□ -0.39
MSI2-201ENST00000284073 WIPF2Q8TF74 440 aaPredicted RBP12.62□□□□□ -0.39
MSI2-201ENST00000284073 C17orf77Q96MU5 243 aa12.62□□□□□ -0.39
MSI2-201ENST00000284073 ANK1P16157 1881 aa12.62□□□□□ -0.39
MSI2-201ENST00000284073 TPSG1Q9NRR2 321 aa12.61□□□□□ -0.39
MSI2-201ENST00000284073 FAM236AA0A1B0GUQ0 79 aa12.61□□□□□ -0.39
MSI2-201ENST00000284073 FAM236BA0A1B0GV22 79 aa12.61□□□□□ -0.39
MSI2-201ENST00000284073 TCTEX1D4Q5JR98 221 aa12.61□□□□□ -0.39
MSI2-201ENST00000284073 TRAV25A0A0B4J276 109 aa12.61□□□□□ -0.39
MSI2-201ENST00000284073 SS18Q15532 418 aa12.61□□□□□ -0.39
MSI2-201ENST00000284073 TEX36Q5VZQ5 186 aa12.61□□□□□ -0.39
MSI2-201ENST00000284073 DUX4L9Q6RFH8 374 aaPredicted RBP12.61□□□□□ -0.39
MSI2-201ENST00000284073 BAALC-AS2P0C853 105 aa12.61□□□□□ -0.39
MSI2-201ENST00000284073 Q8NFD4 153 aa12.61□□□□□ -0.39
MSI2-201ENST00000284073 LY6HO94772 140 aa12.6□□□□□ -0.39
MSI2-201ENST00000284073 LTAP01374 205 aa12.6□□□□□ -0.39
MSI2-201ENST00000284073 PKDREJQ9NTG1 2253 aa12.6□□□□□ -0.39
MSI2-201ENST00000284073 CDK2AP2O75956 126 aa12.6□□□□□ -0.39
MSI2-201ENST00000284073 TMEM258P61165 79 aa12.6□□□□□ -0.39
MSI2-201ENST00000284073 LTBP4Q8N2S1 1624 aa12.6□□□□□ -0.39
MSI2-201ENST00000284073 TRPM7Q96QT4 1865 aa12.6□□□□□ -0.39
MSI2-201ENST00000284073 PRDM6Q9NQX0 595 aa12.6□□□□□ -0.39
MSI2-201ENST00000284073 PRR20EP86478 221 aa12.6□□□□□ -0.39
MSI2-201ENST00000284073 PRR20CP86479 221 aa12.6□□□□□ -0.39
MSI2-201ENST00000284073 PRR20DP86480 221 aa12.6□□□□□ -0.39
MSI2-201ENST00000284073 PRR20BP86481 221 aa12.6□□□□□ -0.39
MSI2-201ENST00000284073 PRR20AP86496 221 aa12.6□□□□□ -0.39
MSI2-201ENST00000284073 H3BUX3 64 aa12.59□□□□□ -0.39
MSI2-201ENST00000284073 PLXNA1Q9UIW2 1896 aa12.59□□□□□ -0.39
MSI2-201ENST00000284073 SPRY2O43597 315 aa12.59□□□□□ -0.39
MSI2-201ENST00000284073 ZNF493Q6ZR52 646 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms