RNA–Protein interactions for RNA: ENST00000284049.7

CHD1-201, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1, Length 6,457 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-201ENST00000284049 RPP21Q9H633 154 aaKnown RBP1.91□□□□□ -2.1
CHD1-201ENST00000284049 INTS1Q8N201 2190 aaKnown RBP1.91□□□□□ -2.1
CHD1-201ENST00000284049 IGHV3-64DA0A0J9YX35 117 aa1.91□□□□□ -2.1
CHD1-201ENST00000284049 SRRM5B3KS81 715 aa1.91□□□□□ -2.1
CHD1-201ENST00000284049 C3orf84H3BNL1 204 aa1.91□□□□□ -2.1
CHD1-201ENST00000284049 H3BPC8 53 aa1.91□□□□□ -2.1
CHD1-201ENST00000284049 RPL7P18124 248 aaKnown RBP1.91□□□□□ -2.1
CHD1-201ENST00000284049 MRPS36P82909 103 aaKnown RBP1.91□□□□□ -2.1
CHD1-201ENST00000284049 ERHP84090 104 aaKnown RBP1.91□□□□□ -2.1
CHD1-201ENST00000284049 LINC00303Q3SY05 128 aa1.91□□□□□ -2.1
CHD1-201ENST00000284049 LINC01554Q52M75 96 aa1.91□□□□□ -2.1
CHD1-201ENST00000284049 CLLU1Q5K131 121 aa1.91□□□□□ -2.1
CHD1-201ENST00000284049 Q6ZQT7 251 aa1.91□□□□□ -2.1
CHD1-201ENST00000284049 PLEKHF2Q9H8W4 249 aa1.91□□□□□ -2.1
CHD1-201ENST00000284049 LY96Q9Y6Y9 160 aa1.91□□□□□ -2.1
CHD1-201ENST00000284049 SNRNP200O75643 2136 aaKnown RBP1.91□□□□□ -2.1
CHD1-201ENST00000284049 A0A087WUU8 490 aa1.91□□□□□ -2.1
CHD1-201ENST00000284049 IGKV1-6A0A0C4DH72 117 aa1.91□□□□□ -2.1
CHD1-201ENST00000284049 C3orf85A0A1B0GTC6 90 aa1.91□□□□□ -2.1
CHD1-201ENST00000284049 TRDV1A0A1B0GX56 115 aa1.91□□□□□ -2.1
CHD1-201ENST00000284049 NDUFB2O95178 105 aa1.91□□□□□ -2.1
CHD1-201ENST00000284049 SOD1P00441 154 aa1.91□□□□□ -2.1
CHD1-201ENST00000284049 ZNF728P0DKX0 622 aa1.91□□□□□ -2.1
CHD1-201ENST00000284049 CRYGSP22914 178 aa1.91□□□□□ -2.1
CHD1-201ENST00000284049 CKS2P33552 79 aa1.91□□□□□ -2.1
CHD1-201ENST00000284049 POLR2JP52435 117 aaKnown RBP1.91□□□□□ -2.1
CHD1-201ENST00000284049 SLC35E3Q7Z769 313 aa1.91□□□□□ -2.1
CHD1-201ENST00000284049 OTORQ9NRC9 128 aa1.91□□□□□ -2.1
CHD1-201ENST00000284049 TNFSF18Q9UNG2 199 aa1.91□□□□□ -2.1
CHD1-201ENST00000284049 F5P12259 2224 aa1.91□□□□□ -2.1
CHD1-201ENST00000284049 A0A087WX48 190 aa1.91□□□□□ -2.1
CHD1-201ENST00000284049 BUB1B-PAK6H3BSN5 160 aa1.91□□□□□ -2.1
CHD1-201ENST00000284049 MUC1P15941 1255 aaPredicted RBP1.91□□□□□ -2.1
CHD1-201ENST00000284049 NUP210LQ5VU65 1888 aa1.91□□□□□ -2.1
CHD1-201ENST00000284049 KTN1-AS1Q86SY8 53 aa1.91□□□□□ -2.1
CHD1-201ENST00000284049 LHFPL1Q86WI0 220 aa1.91□□□□□ -2.1
CHD1-201ENST00000284049 OR4C16Q8NGL9 310 aa1.91□□□□□ -2.1
CHD1-201ENST00000284049 ANKRD17O75179 2603 aaKnown RBP1.91□□□□□ -2.1
CHD1-201ENST00000284049 IGLV2-33A0A075B6J2 118 aaPredicted RBP1.91□□□□□ -2.1
CHD1-201ENST00000284049 TRGV3P03979 118 aa1.91□□□□□ -2.1
CHD1-201ENST00000284049 CDK6Q00534 326 aa1.91□□□□□ -2.1
CHD1-201ENST00000284049 KLRD1Q13241 179 aa1.91□□□□□ -2.1
CHD1-201ENST00000284049 GLYATL3Q5SZD4 288 aa1.91□□□□□ -2.1
CHD1-201ENST00000284049 C10orf91Q5T1B1 145 aa1.91□□□□□ -2.1
CHD1-201ENST00000284049 H3BMM0 161 aa1.9□□□□□ -2.1
CHD1-201ENST00000284049 GZMBP10144 247 aa1.9□□□□□ -2.1
CHD1-201ENST00000284049 RPL22P35268 128 aaKnown RBP1.9□□□□□ -2.1
CHD1-201ENST00000284049 SVBPQ8N300 66 aa1.9□□□□□ -2.1
CHD1-201ENST00000284049 UBE2WQ96B02 151 aa1.9□□□□□ -2.1
CHD1-201ENST00000284049 OR8B2Q96RD0 313 aa1.9□□□□□ -2.1
CHD1-201ENST00000284049 FAM60AQ9NP50 221 aa1.9□□□□□ -2.1
CHD1-201ENST00000284049 OR5V1Q9UGF6 321 aa1.9□□□□□ -2.1
CHD1-201ENST00000284049 LOC107984156A0A0G2JMH3 177 aa1.9□□□□□ -2.1
CHD1-201ENST00000284049 KLLNB2CW77 178 aa1.9□□□□□ -2.1
CHD1-201ENST00000284049 G3V3Q6 166 aa1.9□□□□□ -2.1
CHD1-201ENST00000284049 NPFFO15130 113 aa1.9□□□□□ -2.1
CHD1-201ENST00000284049 PEBP1P30086 187 aaKnown RBP1.9□□□□□ -2.1
CHD1-201ENST00000284049 CRIP2P52943 208 aaPredicted RBP1.9□□□□□ -2.1
CHD1-201ENST00000284049 ARPP19P56211 112 aa1.9□□□□□ -2.1
CHD1-201ENST00000284049 CCL20P78556 96 aa1.9□□□□□ -2.1
CHD1-201ENST00000284049 HSD52Q0P140 79 aa1.9□□□□□ -2.1
CHD1-201ENST00000284049 ARL17AQ8IVW1 177 aa1.9□□□□□ -2.1
CHD1-201ENST00000284049 LINC00337Q8N6G1 96 aa1.9□□□□□ -2.1
CHD1-201ENST00000284049 IER3IP1Q9Y5U9 82 aa1.9□□□□□ -2.1
CHD1-201ENST00000284049 ABCA1O95477 2261 aa1.9□□□□□ -2.11
CHD1-201ENST00000284049 SYNGR2O43760 224 aa1.9□□□□□ -2.11
CHD1-201ENST00000284049 BTG2P78543 158 aa1.9□□□□□ -2.11
CHD1-201ENST00000284049 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.9□□□□□ -2.11
CHD1-201ENST00000284049 TMEM133Q9H2Q1 129 aa1.9□□□□□ -2.11
CHD1-201ENST00000284049 TRAPPC2P0DI81 140 aa1.9□□□□□ -2.11
CHD1-201ENST00000284049 TRAPPC2BP0DI82 140 aa1.9□□□□□ -2.11
CHD1-201ENST00000284049 P0DMU3 169 aa1.9□□□□□ -2.11
CHD1-201ENST00000284049 FAM231AP0DMU4 169 aa1.9□□□□□ -2.11
CHD1-201ENST00000284049 FAM231CP0DMU5 169 aa1.9□□□□□ -2.11
CHD1-201ENST00000284049 IZUMO2Q6UXV1 221 aa1.9□□□□□ -2.11
CHD1-201ENST00000284049 MSRB3Q8IXL7 192 aa1.9□□□□□ -2.11
CHD1-201ENST00000284049 SAR1AQ9NR31 198 aa1.9□□□□□ -2.11
CHD1-201ENST00000284049 MUC6Q6W4X9 2439 aa1.9□□□□□ -2.11
CHD1-201ENST00000284049 LOC107984640A0A0U1RRK4 108 aa1.9□□□□□ -2.11
CHD1-201ENST00000284049 SDCBPO00560 298 aaPredicted RBP1.9□□□□□ -2.11
CHD1-201ENST00000284049 ETV6P41212 452 aa1.9□□□□□ -2.11
CHD1-201ENST00000284049 EBI3Q14213 229 aa1.9□□□□□ -2.11
CHD1-201ENST00000284049 SPATA12Q7Z6I5 190 aa1.9□□□□□ -2.11
CHD1-201ENST00000284049 TCTEX1D1Q8N7M0 179 aa1.9□□□□□ -2.11
CHD1-201ENST00000284049 SIGLECL1Q8N7X8 197 aa1.9□□□□□ -2.11
CHD1-201ENST00000284049 AICDAQ9GZX7 198 aa1.9□□□□□ -2.11
CHD1-201ENST00000284049 TP53BP1Q12888 1972 aaPredicted RBP1.9□□□□□ -2.11
CHD1-201ENST00000284049 TICRRQ7Z2Z1 1910 aa1.9□□□□□ -2.11
CHD1-201ENST00000284049 TRBV27A0A0K0K1C4 114 aa1.89□□□□□ -2.11
CHD1-201ENST00000284049 IGFL2Q6UWQ7 119 aa1.89□□□□□ -2.11
CHD1-201ENST00000284049 CLDND2Q8NHS1 167 aa1.89□□□□□ -2.11
CHD1-201ENST00000284049 GPX7Q96SL4 187 aaPredicted RBP1.89□□□□□ -2.11
CHD1-201ENST00000284049 MRPS16Q9Y3D3 137 aaKnown RBP1.89□□□□□ -2.11
CHD1-201ENST00000284049 TRAV4A0A0B4J268 109 aa1.89□□□□□ -2.11
CHD1-201ENST00000284049 TRAV40A0A0B4J280 105 aa1.89□□□□□ -2.11
CHD1-201ENST00000284049 KRTAP4-16G5E9R7 235 aaPredicted RBP1.89□□□□□ -2.11
CHD1-201ENST00000284049 TMEM250H0YL14 139 aa1.89□□□□□ -2.11
CHD1-201ENST00000284049 H7BYZ3 331 aa1.89□□□□□ -2.11
CHD1-201ENST00000284049 SOCS1O15524 211 aa1.89□□□□□ -2.11
CHD1-201ENST00000284049 TIMM17BO60830 172 aa1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms