RNA–Protein interactions for RNA: ENST00000282841.9

GGPS1-201, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 2,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-201ENST00000282841 SMAGPQ0VAQ4 97 aa8.44□□□□□ -1.06
GGPS1-201ENST00000282841 GOLT1AQ6ZVE7 132 aa8.44□□□□□ -1.06
GGPS1-201ENST00000282841 RNF182Q8N6D2 247 aa8.44□□□□□ -1.06
GGPS1-201ENST00000282841 NOTCH3Q9UM47 2321 aa8.44□□□□□ -1.06
GGPS1-201ENST00000282841 TRBV7-1A0A0A6YYK4 115 aa8.44□□□□□ -1.06
GGPS1-201ENST00000282841 SIVA1O15304 175 aa8.44□□□□□ -1.06
GGPS1-201ENST00000282841 SPINK4O60575 86 aa8.44□□□□□ -1.06
GGPS1-201ENST00000282841 ATRQ13535 2644 aa8.44□□□□□ -1.06
GGPS1-201ENST00000282841 DNAJC9-AS1A6NH13 148 aa8.43□□□□□ -1.06
GGPS1-201ENST00000282841 MRPS12O15235 138 aaKnown RBP8.43□□□□□ -1.06
GGPS1-201ENST00000282841 IGLV1-40P01703 118 aa8.43□□□□□ -1.06
GGPS1-201ENST00000282841 IGLC2P0DOY2 106 aa8.43□□□□□ -1.06
GGPS1-201ENST00000282841 HIST1H1EP10412 219 aaKnown RBP8.43□□□□□ -1.06
GGPS1-201ENST00000282841 DEFB1P60022 68 aa8.43□□□□□ -1.06
GGPS1-201ENST00000282841 TM4SF20Q53R12 229 aa8.43□□□□□ -1.06
GGPS1-201ENST00000282841 KHDC1LQ5JSQ8 128 aa8.43□□□□□ -1.06
GGPS1-201ENST00000282841 C9orf139Q6ZV77 190 aa8.43□□□□□ -1.06
GGPS1-201ENST00000282841 OR4F17Q8NGA8 305 aa8.43□□□□□ -1.06
GGPS1-201ENST00000282841 PRSS22Q9GZN4 317 aa8.43□□□□□ -1.06
GGPS1-201ENST00000282841 EPDR1Q9UM22 224 aa8.43□□□□□ -1.06
GGPS1-201ENST00000282841 TRBV19A0A075B6N1 114 aa8.43□□□□□ -1.06
GGPS1-201ENST00000282841 BMPR1BO00238 502 aa8.43□□□□□ -1.06
GGPS1-201ENST00000282841 MYCNOSP40205 109 aa8.43□□□□□ -1.06
GGPS1-201ENST00000282841 SLC35B1P78383 322 aa8.43□□□□□ -1.06
GGPS1-201ENST00000282841 CFHR3Q02985 330 aa8.43□□□□□ -1.06
GGPS1-201ENST00000282841 H7BYZ3 331 aa8.43□□□□□ -1.06
GGPS1-201ENST00000282841 NPFFR1Q9GZQ6 430 aa8.43□□□□□ -1.06
GGPS1-201ENST00000282841 TRBV7-9A0A0J9YWB2 115 aa8.42□□□□□ -1.06
GGPS1-201ENST00000282841 FAM223BA6NKX1 122 aa8.42□□□□□ -1.06
GGPS1-201ENST00000282841 PSMB8P28062 276 aa8.42□□□□□ -1.06
GGPS1-201ENST00000282841 CRIP2P52943 208 aaPredicted RBP8.42□□□□□ -1.06
GGPS1-201ENST00000282841 TCL1AP56279 114 aa8.42□□□□□ -1.06
GGPS1-201ENST00000282841 RPL11P62913 178 aaKnown RBP8.42□□□□□ -1.06
GGPS1-201ENST00000282841 PNRC1Q12796 327 aaPredicted RBP8.42□□□□□ -1.06
GGPS1-201ENST00000282841 FAM223AQ8IWN6 122 aa8.42□□□□□ -1.06
GGPS1-201ENST00000282841 C11orf52Q96A22 123 aa8.42□□□□□ -1.06
GGPS1-201ENST00000282841 TMEM18Q96B42 140 aa8.42□□□□□ -1.06
GGPS1-201ENST00000282841 ZNF785A8K8V0 405 aa8.42□□□□□ -1.06
GGPS1-201ENST00000282841 BUB3O43684 328 aa8.42□□□□□ -1.06
GGPS1-201ENST00000282841 LY6G6DO95868 133 aa8.42□□□□□ -1.06
GGPS1-201ENST00000282841 IGLV2-8P01709 118 aa8.42□□□□□ -1.06
GGPS1-201ENST00000282841 FRMD6-AS1P0C7T7 363 aa8.42□□□□□ -1.06
GGPS1-201ENST00000282841 SIGLEC15Q6ZMC9 328 aa8.42□□□□□ -1.06
GGPS1-201ENST00000282841 PRNTQ86SH4 94 aa8.42□□□□□ -1.06
GGPS1-201ENST00000282841 SERTAD4Q9NUC0 356 aa8.42□□□□□ -1.06
GGPS1-201ENST00000282841 IGKV2-40A0A087WW87 121 aaPredicted RBP8.41□□□□□ -1.06
GGPS1-201ENST00000282841 CLDN34H7C241 214 aa8.41□□□□□ -1.06
GGPS1-201ENST00000282841 HAX1O00165 279 aa8.41□□□□□ -1.06
GGPS1-201ENST00000282841 CD5LO43866 347 aa8.41□□□□□ -1.06
GGPS1-201ENST00000282841 IGKV2D-40P01614 121 aaPredicted RBP8.41□□□□□ -1.06
GGPS1-201ENST00000282841 GALR1P47211 349 aa8.41□□□□□ -1.06
GGPS1-201ENST00000282841 BAGE2Q86Y30 109 aa8.41□□□□□ -1.06
GGPS1-201ENST00000282841 CMTM2Q8TAZ6 248 aa8.41□□□□□ -1.06
GGPS1-201ENST00000282841 GTSF1LQ9H1H1 148 aa8.41□□□□□ -1.06
GGPS1-201ENST00000282841 TCRAP04437 139 aa8.41□□□□□ -1.06
GGPS1-201ENST00000282841 AZU1P20160 251 aa8.41□□□□□ -1.06
GGPS1-201ENST00000282841 CNN1P51911 297 aaKnown RBP8.41□□□□□ -1.06
GGPS1-201ENST00000282841 IGF2BP2-AS1Q96M15 143 aa8.41□□□□□ -1.06
GGPS1-201ENST00000282841 A0A1W2PRX2 142 aa8.4□□□□□ -1.06
GGPS1-201ENST00000282841 H0Y8G0 127 aa8.4□□□□□ -1.06
GGPS1-201ENST00000282841 IGHG4P01861 327 aa8.4□□□□□ -1.06
GGPS1-201ENST00000282841 UBE2G1P62253 170 aa8.4□□□□□ -1.06
GGPS1-201ENST00000282841 LINC00322Q6ZN03 302 aaPredicted RBP8.4□□□□□ -1.06
GGPS1-201ENST00000282841 METTL26Q96S19 204 aa8.4□□□□□ -1.06
GGPS1-201ENST00000282841 C20orf144Q9BQM9 153 aa8.4□□□□□ -1.06
GGPS1-201ENST00000282841 TXNDC17Q9BRA2 123 aa8.4□□□□□ -1.06
GGPS1-201ENST00000282841 TNFRSF18Q9Y5U5 241 aa8.4□□□□□ -1.06
GGPS1-201ENST00000282841 PRAC2D3DTV9 90 aa8.4□□□□□ -1.06
GGPS1-201ENST00000282841 HINT1P49773 126 aaPredicted RBP8.4□□□□□ -1.06
GGPS1-201ENST00000282841 NIT1Q86X76 327 aa8.4□□□□□ -1.06
GGPS1-201ENST00000282841 Q8TAT8 98 aa8.4□□□□□ -1.06
GGPS1-201ENST00000282841 TMEM14CQ9P0S9 112 aa8.4□□□□□ -1.06
GGPS1-201ENST00000282841 A0A087WWC5 75 aa8.4□□□□□ -1.07
GGPS1-201ENST00000282841 SCGB2A1O75556 95 aa8.4□□□□□ -1.07
GGPS1-201ENST00000282841 Q6ZSV7 163 aa8.4□□□□□ -1.07
GGPS1-201ENST00000282841 FAM110AQ9BQ89 295 aa8.4□□□□□ -1.07
GGPS1-201ENST00000282841 LAMTOR2Q9Y2Q5 125 aa8.4□□□□□ -1.07
GGPS1-201ENST00000282841 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.39□□□□□ -1.07
GGPS1-201ENST00000282841 B4DEV8 164 aa8.39□□□□□ -1.07
GGPS1-201ENST00000282841 TCTEX1D4Q5JR98 221 aa8.39□□□□□ -1.07
GGPS1-201ENST00000282841 KLHDC1Q8N7A1 406 aa8.39□□□□□ -1.07
GGPS1-201ENST00000282841 C5orf17Q8NAS9 161 aa8.39□□□□□ -1.07
GGPS1-201ENST00000282841 OR10G8Q8NGN5 311 aa8.39□□□□□ -1.07
GGPS1-201ENST00000282841 USMG5Q96IX5 58 aa8.39□□□□□ -1.07
GGPS1-201ENST00000282841 PEF1Q9UBV8 284 aaKnown RBP8.39□□□□□ -1.07
GGPS1-201ENST00000282841 INAFM1C9JVW0 142 aa8.39□□□□□ -1.07
GGPS1-201ENST00000282841 RPL7P18124 248 aaKnown RBP8.39□□□□□ -1.07
GGPS1-201ENST00000282841 ERCC8Q13216 396 aa8.39□□□□□ -1.07
GGPS1-201ENST00000282841 TMEM183BQ1AE95 376 aa8.39□□□□□ -1.07
GGPS1-201ENST00000282841 KLK9Q2XQG4 91 aa8.39□□□□□ -1.07
GGPS1-201ENST00000282841 WFDC3Q8IUB2 231 aa8.39□□□□□ -1.07
GGPS1-201ENST00000282841 OTORQ9NRC9 128 aa8.39□□□□□ -1.07
GGPS1-201ENST00000282841 KLK9Q9UKQ9 250 aa8.39□□□□□ -1.07
GGPS1-201ENST00000282841 IGHV4OR15-8A0A075B7B6 117 aa8.38□□□□□ -1.07
GGPS1-201ENST00000282841 A0A087WW49 117 aa8.38□□□□□ -1.07
GGPS1-201ENST00000282841 A0A0G2JLM5 398 aa8.38□□□□□ -1.07
GGPS1-201ENST00000282841 GAGE12BA1L429 117 aa8.38□□□□□ -1.07
GGPS1-201ENST00000282841 SYNJ2BPP57105 145 aa8.38□□□□□ -1.07
GGPS1-201ENST00000282841 VGLL1Q99990 258 aa8.38□□□□□ -1.07
GGPS1-201ENST00000282841 VAMP8Q9BV40 100 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms