RNA–Protein interactions for RNA: ENST00000277817.10

HERC4-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-201ENST00000277817 A0A1W2PS18 150 aa2.28□□□□□ -2.05
HERC4-201ENST00000277817 M0R381 172 aa2.28□□□□□ -2.05
HERC4-201ENST00000277817 IGHV3-11P01762 117 aa2.28□□□□□ -2.05
HERC4-201ENST00000277817 PLA2G2AP14555 144 aa2.28□□□□□ -2.05
HERC4-201ENST00000277817 LYPD2Q6UXB3 125 aa2.28□□□□□ -2.05
HERC4-201ENST00000277817 EXOC3-AS1Q8N2X6 119 aa2.28□□□□□ -2.05
HERC4-201ENST00000277817 PHLDA1Q8WV24 401 aaPredicted RBP2.28□□□□□ -2.05
HERC4-201ENST00000277817 RASL10AQ92737 203 aa2.28□□□□□ -2.05
HERC4-201ENST00000277817 ARPC1AQ92747 370 aa2.28□□□□□ -2.05
HERC4-201ENST00000277817 NEUROG1Q92886 237 aa2.28□□□□□ -2.05
HERC4-201ENST00000277817 EEF1AKMT3Q96AZ1 226 aa2.28□□□□□ -2.05
HERC4-201ENST00000277817 FMC1Q96HJ9 113 aa2.28□□□□□ -2.05
HERC4-201ENST00000277817 PRELID3AQ96N28 172 aa2.28□□□□□ -2.05
HERC4-201ENST00000277817 KRTAP3-1Q9BYR8 98 aa2.28□□□□□ -2.05
HERC4-201ENST00000277817 OSTCQ9NRP0 149 aa2.28□□□□□ -2.05
HERC4-201ENST00000277817 LINC00527Q9UJ94 153 aa2.28□□□□□ -2.05
HERC4-201ENST00000277817 SELENOKQ9Y6D0 94 aa2.28□□□□□ -2.05
HERC4-201ENST00000277817 IGHV3OR16-12A0A075B7B8 117 aa2.27□□□□□ -2.05
HERC4-201ENST00000277817 PMS2P5A8MQ11 134 aa2.27□□□□□ -2.05
HERC4-201ENST00000277817 TMEM178BH3BS89 294 aa2.27□□□□□ -2.05
HERC4-201ENST00000277817 IGLV3-1P01715 115 aa2.27□□□□□ -2.05
HERC4-201ENST00000277817 IGHV1-8P0DP01 117 aa2.27□□□□□ -2.05
HERC4-201ENST00000277817 PSG1P11464 419 aa2.27□□□□□ -2.05
HERC4-201ENST00000277817 PDLIM4P50479 330 aa2.27□□□□□ -2.05
HERC4-201ENST00000277817 DLX1P56177 255 aa2.27□□□□□ -2.05
HERC4-201ENST00000277817 RPS20P60866 119 aaKnown RBP2.27□□□□□ -2.05
HERC4-201ENST00000277817 HIST1H1AQ02539 215 aaPredicted RBP2.27□□□□□ -2.05
HERC4-201ENST00000277817 IL15RAQ13261 267 aa2.27□□□□□ -2.05
HERC4-201ENST00000277817 FAM106AQ4KMX7 169 aa2.27□□□□□ -2.05
HERC4-201ENST00000277817 FAM74A4Q5TZK3 123 aa2.27□□□□□ -2.05
HERC4-201ENST00000277817 EBLN2Q6P2I7 272 aa2.27□□□□□ -2.05
HERC4-201ENST00000277817 Q6ZSV7 163 aa2.27□□□□□ -2.05
HERC4-201ENST00000277817 NIT1Q86X76 327 aa2.27□□□□□ -2.05
HERC4-201ENST00000277817 IL17DQ8TAD2 202 aa2.27□□□□□ -2.05
HERC4-201ENST00000277817 BAALCQ8WXS3 180 aa2.27□□□□□ -2.05
HERC4-201ENST00000277817 GAFA1Q96PS6 74 aa2.27□□□□□ -2.05
HERC4-201ENST00000277817 MIEN1Q9BRT3 115 aa2.27□□□□□ -2.05
HERC4-201ENST00000277817 ZNF257Q9Y2Q1 563 aa2.27□□□□□ -2.05
HERC4-201ENST00000277817 PRKDCP78527 4128 aaKnown RBP2.27□□□□□ -2.05
HERC4-201ENST00000277817 LAMA3Q16787 3333 aa2.27□□□□□ -2.05
HERC4-201ENST00000277817 PKHD1L1Q86WI1 4243 aa2.27□□□□□ -2.05
HERC4-201ENST00000277817 NCOA6Q14686 2063 aaPredicted RBP2.27□□□□□ -2.05
HERC4-201ENST00000277817 HECTD4Q9Y4D8 3996 aa2.27□□□□□ -2.05
HERC4-201ENST00000277817 FREM1Q5H8C1 2179 aa2.27□□□□□ -2.05
HERC4-201ENST00000277817 MALRD1Q5VYJ5 2156 aa2.27□□□□□ -2.05
HERC4-201ENST00000277817 TRAV9-1A0A075B6T8 112 aa2.27□□□□□ -2.05
HERC4-201ENST00000277817 IGHV2-26A0A0B4J1V2 119 aa2.27□□□□□ -2.05
HERC4-201ENST00000277817 TRAV8-6A0A0B4J262 113 aa2.27□□□□□ -2.05
HERC4-201ENST00000277817 C9JCJ5 164 aa2.27□□□□□ -2.05
HERC4-201ENST00000277817 H3BVH4 76 aa2.27□□□□□ -2.05
HERC4-201ENST00000277817 H7C2G1 150 aa2.27□□□□□ -2.05
HERC4-201ENST00000277817 WNT2P09544 360 aa2.27□□□□□ -2.05
HERC4-201ENST00000277817 LINC00614P0C842 121 aa2.27□□□□□ -2.05
HERC4-201ENST00000277817 HERVK_113P61574 105 aa2.27□□□□□ -2.05
HERC4-201ENST00000277817 LY6DQ14210 128 aa2.27□□□□□ -2.05
HERC4-201ENST00000277817 ZNF726P1Q15940 193 aa2.27□□□□□ -2.05
HERC4-201ENST00000277817 PRSS8Q16651 343 aa2.27□□□□□ -2.05
HERC4-201ENST00000277817 DUX4L9Q6RFH8 374 aaPredicted RBP2.27□□□□□ -2.05
HERC4-201ENST00000277817 OR1N2Q8NGR9 330 aa2.27□□□□□ -2.05
HERC4-201ENST00000277817 HIST1H4GQ99525 98 aa2.27□□□□□ -2.05
HERC4-201ENST00000277817 GNB1LQ9BYB4 327 aa2.27□□□□□ -2.05
HERC4-201ENST00000277817 TRAV8-1A0A0A6YYK1 113 aa2.27□□□□□ -2.05
HERC4-201ENST00000277817 LOC107984156A0A0G2JMH3 177 aa2.27□□□□□ -2.05
HERC4-201ENST00000277817 H0YJW9 148 aa2.27□□□□□ -2.05
HERC4-201ENST00000277817 J3QKU1 62 aa2.27□□□□□ -2.05
HERC4-201ENST00000277817 M0R3E3 92 aa2.27□□□□□ -2.05
HERC4-201ENST00000277817 ZNF324O75467 553 aaPredicted RBP2.27□□□□□ -2.05
HERC4-201ENST00000277817 PRSS2P07478 247 aa2.27□□□□□ -2.05
HERC4-201ENST00000277817 COL8A2P25067 703 aa2.27□□□□□ -2.05
HERC4-201ENST00000277817 LYPD6Q86Y78 171 aa2.27□□□□□ -2.05
HERC4-201ENST00000277817 ARL17AQ8IVW1 177 aa2.27□□□□□ -2.05
HERC4-201ENST00000277817 CIARTQ8N365 385 aaPredicted RBP2.27□□□□□ -2.05
HERC4-201ENST00000277817 ZNF114Q8NC26 417 aa2.27□□□□□ -2.05
HERC4-201ENST00000277817 DYNLRB2Q8TF09 96 aa2.27□□□□□ -2.05
HERC4-201ENST00000277817 ZNF414Q96IQ9 312 aa2.27□□□□□ -2.05
HERC4-201ENST00000277817 OTORQ9NRC9 128 aa2.27□□□□□ -2.05
HERC4-201ENST00000277817 PSG8Q9UQ74 426 aa2.27□□□□□ -2.05
HERC4-201ENST00000277817 ZGRF1Q86YA3 2104 aa2.27□□□□□ -2.05
HERC4-201ENST00000277817 F8P00451 2351 aa2.27□□□□□ -2.05
HERC4-201ENST00000277817 PDZD2O15018 2839 aa2.26□□□□□ -2.05
HERC4-201ENST00000277817 ATRQ13535 2644 aa2.26□□□□□ -2.05
HERC4-201ENST00000277817 IGHV1-3A0A0C4DH29 117 aa2.26□□□□□ -2.05
HERC4-201ENST00000277817 FCN3O75636 299 aa2.26□□□□□ -2.05
HERC4-201ENST00000277817 FABP2P12104 132 aa2.26□□□□□ -2.05
HERC4-201ENST00000277817 ZNF138P52744 262 aa2.26□□□□□ -2.05
HERC4-201ENST00000277817 FOXI1Q12951 378 aa2.26□□□□□ -2.05
HERC4-201ENST00000277817 KLRD1Q13241 179 aa2.26□□□□□ -2.05
HERC4-201ENST00000277817 DNLZQ5SXM8 178 aa2.26□□□□□ -2.05
HERC4-201ENST00000277817 Q6ZS92 163 aa2.26□□□□□ -2.05
HERC4-201ENST00000277817 ORMDL3Q8N138 153 aa2.26□□□□□ -2.05
HERC4-201ENST00000277817 MRAPQ8TCY5 172 aa2.26□□□□□ -2.05
HERC4-201ENST00000277817 TSKUQ8WUA8 353 aa2.26□□□□□ -2.05
HERC4-201ENST00000277817 Q96MF0 132 aa2.26□□□□□ -2.05
HERC4-201ENST00000277817 SCRT1Q9BWW7 348 aa2.26□□□□□ -2.05
HERC4-201ENST00000277817 LAMTOR2Q9Y2Q5 125 aa2.26□□□□□ -2.05
HERC4-201ENST00000277817 NCKAP5O14513 1909 aa2.26□□□□□ -2.05
HERC4-201ENST00000277817 PIEZO2Q9H5I5 2752 aa2.26□□□□□ -2.05
HERC4-201ENST00000277817 FABP5P3A8MUU1 101 aa2.26□□□□□ -2.05
HERC4-201ENST00000277817 K7ERU9 68 aa2.26□□□□□ -2.05
HERC4-201ENST00000277817 TNFSF13O75888 250 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms