RNA–Protein interactions for RNA: ENST00000274030.10

USP53-201, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP53, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-201ENST00000274030 PFN1P07737 140 aaKnown RBP9.17□□□□□ -0.94
USP53-201ENST00000274030 TCTEX1D4Q5JR98 221 aa9.17□□□□□ -0.94
USP53-201ENST00000274030 FNDC10F2Z333 226 aa9.17□□□□□ -0.94
USP53-201ENST00000274030 PFN2P35080 140 aa9.17□□□□□ -0.94
USP53-201ENST00000274030 ZNF833PQ6ZTB9 187 aa9.17□□□□□ -0.94
USP53-201ENST00000274030 C8orf86Q6ZUL3 223 aa9.17□□□□□ -0.94
USP53-201ENST00000274030 DTX1Q86Y01 620 aa9.17□□□□□ -0.94
USP53-201ENST00000274030 LINC01619G3V211 115 aa9.16□□□□□ -0.94
USP53-201ENST00000274030 HAPLN4Q86UW8 402 aa9.16□□□□□ -0.94
USP53-201ENST00000274030 FNDC1Q4ZHG4 1894 aaPredicted RBP9.16□□□□□ -0.94
USP53-201ENST00000274030 GAGE2BQ13066 116 aa9.16□□□□□ -0.94
USP53-201ENST00000274030 GAGE2EQ4V326 116 aa9.16□□□□□ -0.94
USP53-201ENST00000274030 SRSF8Q9BRL6 282 aaKnown RBP9.16□□□□□ -0.94
USP53-201ENST00000274030 GAGE2DQ9UEU5 116 aa9.16□□□□□ -0.94
USP53-201ENST00000274030 PCNX2A6NKB5 2137 aa9.16□□□□□ -0.94
USP53-201ENST00000274030 A0A096LPF7 62 aa9.16□□□□□ -0.94
USP53-201ENST00000274030 ZNF726P1Q15940 193 aa9.16□□□□□ -0.94
USP53-201ENST00000274030 TRPT1Q86TN4 253 aaKnown RBP9.16□□□□□ -0.94
USP53-201ENST00000274030 YPEL3P61236 119 aaPredicted RBP9.16□□□□□ -0.94
USP53-201ENST00000274030 FAM120AOSQ5T036 256 aa9.16□□□□□ -0.94
USP53-201ENST00000274030 C2orf66Q6UXQ4 117 aa9.16□□□□□ -0.94
USP53-201ENST00000274030 C18orf32Q8TCD1 76 aa9.16□□□□□ -0.94
USP53-201ENST00000274030 FAM215AQ9Y5M1 114 aa9.16□□□□□ -0.94
USP53-201ENST00000274030 DLX4Q92988 240 aaPredicted RBP9.15□□□□□ -0.94
USP53-201ENST00000274030 CEACAM8P31997 349 aaPredicted RBP9.15□□□□□ -0.94
USP53-201ENST00000274030 ANXA2RQ3ZCQ2 193 aa9.15□□□□□ -0.94
USP53-201ENST00000274030 PRSS57Q6UWY2 283 aa9.15□□□□□ -0.94
USP53-201ENST00000274030 TMEM75Q8N9X5 138 aa9.15□□□□□ -0.94
USP53-201ENST00000274030 Q8TCH9 128 aa9.15□□□□□ -0.94
USP53-201ENST00000274030 THSD7BQ9C0I4 1608 aa9.15□□□□□ -0.94
USP53-201ENST00000274030 NDUFS6O75380 124 aaKnown RBP9.15□□□□□ -0.94
USP53-201ENST00000274030 LGALS1P09382 135 aaKnown RBP9.15□□□□□ -0.94
USP53-201ENST00000274030 DAD1P61803 113 aa9.15□□□□□ -0.94
USP53-201ENST00000274030 C9JAW5 83 aa9.15□□□□□ -0.95
USP53-201ENST00000274030 DLEU1O43261 78 aa9.15□□□□□ -0.95
USP53-201ENST00000274030 ZNF114Q8NC26 417 aa9.15□□□□□ -0.95
USP53-201ENST00000274030 HELZP42694 1942 aaKnown RBP9.15□□□□□ -0.95
USP53-201ENST00000274030 ETV2O00321 342 aaPredicted RBP9.15□□□□□ -0.95
USP53-201ENST00000274030 AZU1P20160 251 aa9.15□□□□□ -0.95
USP53-201ENST00000274030 GRNP28799 593 aaKnown RBP9.15□□□□□ -0.95
USP53-201ENST00000274030 GTSF1LQ9H1H1 148 aa9.15□□□□□ -0.95
USP53-201ENST00000274030 ZNRF2Q8NHG8 242 aa9.14□□□□□ -0.95
USP53-201ENST00000274030 MUC6Q6W4X9 2439 aa9.14□□□□□ -0.95
USP53-201ENST00000274030 FAM104BQ5XKR9 115 aa9.14□□□□□ -0.95
USP53-201ENST00000274030 GFRA4Q9GZZ7 299 aa9.14□□□□□ -0.95
USP53-201ENST00000274030 NXPH4O95158 308 aa9.14□□□□□ -0.95
USP53-201ENST00000274030 ZNF124Q15973 351 aa9.14□□□□□ -0.95
USP53-201ENST00000274030 MED13Q9UHV7 2174 aa9.14□□□□□ -0.95
USP53-201ENST00000274030 IGFL3Q6UXB1 125 aa9.14□□□□□ -0.95
USP53-201ENST00000274030 C15orf65H3BRN8 121 aa9.13□□□□□ -0.95
USP53-201ENST00000274030 GAGE2AQ6NT46 116 aa9.13□□□□□ -0.95
USP53-201ENST00000274030 TMEM190Q8WZ59 177 aa9.13□□□□□ -0.95
USP53-201ENST00000274030 SDHAF1A6NFY7 115 aa9.13□□□□□ -0.95
USP53-201ENST00000274030 GATA3P23771 443 aa9.13□□□□□ -0.95
USP53-201ENST00000274030 GAGE6Q13070 117 aa9.13□□□□□ -0.95
USP53-201ENST00000274030 SLAQ13239 276 aa9.13□□□□□ -0.95
USP53-201ENST00000274030 ANAPC10Q9UM13 185 aa9.13□□□□□ -0.95
USP53-201ENST00000274030 TNCP24821 2201 aa9.13□□□□□ -0.95
USP53-201ENST00000274030 TICRRQ7Z2Z1 1910 aa9.13□□□□□ -0.95
USP53-201ENST00000274030 CDK2AP2O75956 126 aa9.13□□□□□ -0.95
USP53-201ENST00000274030 PRR25Q96S07 402 aa9.13□□□□□ -0.95
USP53-201ENST00000274030 IGHV1OR15-1A0A075B7D0 117 aa9.13□□□□□ -0.95
USP53-201ENST00000274030 MRPL51Q4U2R6 128 aaKnown RBP9.13□□□□□ -0.95
USP53-201ENST00000274030 F8WEM9 126 aa9.13□□□□□ -0.95
USP53-201ENST00000274030 K7EM74 188 aa9.13□□□□□ -0.95
USP53-201ENST00000274030 PMVKQ15126 192 aa9.13□□□□□ -0.95
USP53-201ENST00000274030 POLR3KQ9Y2Y1 108 aaPredicted RBP9.13□□□□□ -0.95
USP53-201ENST00000274030 PRSS46E5RG02 174 aa9.12□□□□□ -0.95
USP53-201ENST00000274030 RNASE13Q5GAN3 156 aaKnown RBP9.12□□□□□ -0.95
USP53-201ENST00000274030 ZNF561-AS1K7EIQ3 104 aa9.12□□□□□ -0.95
USP53-201ENST00000274030 EREGO14944 169 aa9.12□□□□□ -0.95
USP53-201ENST00000274030 HLA-DMBP28068 263 aa9.12□□□□□ -0.95
USP53-201ENST00000274030 ZFAND6Q6FIF0 208 aa9.12□□□□□ -0.95
USP53-201ENST00000274030 C17orf77Q96MU5 243 aa9.12□□□□□ -0.95
USP53-201ENST00000274030 ZNF492Q9P255 531 aa9.12□□□□□ -0.95
USP53-201ENST00000274030 F6UB75 175 aa9.12□□□□□ -0.95
USP53-201ENST00000274030 TRBV25-1A0A075B6N4 114 aa9.11□□□□□ -0.95
USP53-201ENST00000274030 SPRY2O43597 315 aa9.11□□□□□ -0.95
USP53-201ENST00000274030 CDKN1BP46527 198 aa9.11□□□□□ -0.95
USP53-201ENST00000274030 PLA2G2CQ5R387 149 aa9.11□□□□□ -0.95
USP53-201ENST00000274030 IGLV1-44P01699 117 aa9.11□□□□□ -0.95
USP53-201ENST00000274030 CLPSL2Q6UWE3 100 aa9.11□□□□□ -0.95
USP53-201ENST00000274030 CFPP27918 469 aa9.11□□□□□ -0.95
USP53-201ENST00000274030 Q0VG73 95 aa9.11□□□□□ -0.95
USP53-201ENST00000274030 I3L3M4 83 aa9.11□□□□□ -0.95
USP53-201ENST00000274030 ZC2HC1AQ96GY0 325 aa9.11□□□□□ -0.95
USP53-201ENST00000274030 ACACBO00763 2458 aa9.11□□□□□ -0.95
USP53-201ENST00000274030 C22orf46C9J442 243 aa9.1□□□□□ -0.95
USP53-201ENST00000274030 WT1P19544 449 aaPredicted RBP9.1□□□□□ -0.95
USP53-201ENST00000274030 ADAMTSL5Q6ZMM2 481 aa9.1□□□□□ -0.95
USP53-201ENST00000274030 H3BRN7 92 aa9.1□□□□□ -0.95
USP53-201ENST00000274030 RHODO00212 210 aa9.1□□□□□ -0.95
USP53-201ENST00000274030 NDUFA4O00483 81 aa9.1□□□□□ -0.95
USP53-201ENST00000274030 UBE2V1Q13404 147 aa9.1□□□□□ -0.95
USP53-201ENST00000274030 V9GYV3 84 aa9.1□□□□□ -0.95
USP53-201ENST00000274030 SONP18583 2426 aaKnown RBP9.1□□□□□ -0.95
USP53-201ENST00000274030 PLXNA3P51805 1871 aa9.1□□□□□ -0.95
USP53-201ENST00000274030 ZSWIM8A7E2V4 1837 aa9.1□□□□□ -0.95
USP53-201ENST00000274030 IGLC1P0CG04 106 aa9.1□□□□□ -0.95
USP53-201ENST00000274030 Q8N8P6 123 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms