RNA–Protein interactions for RNA: ENST00000268603.8

CDH11-201, Transcript of cadherin 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH11, Length 6,857 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-201ENST00000268603 RNF138Q8WVD3 245 aa10.13□□□□□ -0.79
CDH11-201ENST00000268603 MRPL36Q9P0J6 103 aaKnown RBP10.13□□□□□ -0.79
CDH11-201ENST00000268603 ALPK2Q86TB3 2170 aa10.13□□□□□ -0.79
CDH11-201ENST00000268603 CCL24O00175 119 aa10.12□□□□□ -0.79
CDH11-201ENST00000268603 MPZP25189 248 aa10.12□□□□□ -0.79
CDH11-201ENST00000268603 LINC01551Q86U37 167 aa10.12□□□□□ -0.79
CDH11-201ENST00000268603 Q86TA4 180 aa10.12□□□□□ -0.79
CDH11-201ENST00000268603 K7ERS5 55 aa10.12□□□□□ -0.79
CDH11-201ENST00000268603 LINC00205P59089 165 aa10.12□□□□□ -0.79
CDH11-201ENST00000268603 ZFP36L1Q07352 338 aaKnown RBP10.12□□□□□ -0.79
CDH11-201ENST00000268603 GREB1LQ9C091 1923 aaPredicted RBP10.12□□□□□ -0.79
CDH11-201ENST00000268603 NDUFB8O95169 186 aa10.12□□□□□ -0.79
CDH11-201ENST00000268603 ZNF362Q5T0B9 420 aaPredicted RBP10.12□□□□□ -0.79
CDH11-201ENST00000268603 C8orf86Q6ZUL3 223 aa10.12□□□□□ -0.79
CDH11-201ENST00000268603 SPANXCQ9NY87 97 aa10.12□□□□□ -0.79
CDH11-201ENST00000268603 PRO1854Q9UHT4 67 aa10.12□□□□□ -0.79
CDH11-201ENST00000268603 CACNA1GO43497 2377 aa10.12□□□□□ -0.79
CDH11-201ENST00000268603 BAALC-AS2P0C853 105 aa10.12□□□□□ -0.79
CDH11-201ENST00000268603 DOPEY2Q9Y3R5 2298 aa10.12□□□□□ -0.79
CDH11-201ENST00000268603 J3QLI3 93 aa10.11□□□□□ -0.79
CDH11-201ENST00000268603 C5orf38Q86SI9 138 aa10.11□□□□□ -0.79
CDH11-201ENST00000268603 SHANK2-AS3Q9BTD1 123 aa10.11□□□□□ -0.79
CDH11-201ENST00000268603 TRBV24-1A0A075B6N3 115 aa10.11□□□□□ -0.79
CDH11-201ENST00000268603 TRAV4A0A0B4J268 109 aa10.11□□□□□ -0.79
CDH11-201ENST00000268603 CSRP3P50461 194 aa10.11□□□□□ -0.79
CDH11-201ENST00000268603 ZNRD1Q9P1U0 126 aa10.11□□□□□ -0.79
CDH11-201ENST00000268603 GTSF1Q8WW33 167 aa10.11□□□□□ -0.79
CDH11-201ENST00000268603 IGKV1-9A0A0C4DH69 117 aa10.11□□□□□ -0.79
CDH11-201ENST00000268603 BRK1Q8WUW1 75 aa10.11□□□□□ -0.79
CDH11-201ENST00000268603 IGFBPL1Q8WX77 278 aa10.11□□□□□ -0.79
CDH11-201ENST00000268603 U3KQE9 123 aa10.11□□□□□ -0.79
CDH11-201ENST00000268603 NTF4P34130 210 aa10.11□□□□□ -0.79
CDH11-201ENST00000268603 ETDBQ3ZM63 59 aa10.11□□□□□ -0.79
CDH11-201ENST00000268603 TEX36Q5VZQ5 186 aa10.11□□□□□ -0.79
CDH11-201ENST00000268603 MUSTN1Q8IVN3 82 aa10.11□□□□□ -0.79
CDH11-201ENST00000268603 IGHV2-70DA0A0C4DH43 119 aa10.11□□□□□ -0.79
CDH11-201ENST00000268603 LAIR2Q6ISS4 152 aa10.11□□□□□ -0.79
CDH11-201ENST00000268603 BRWD3Q6RI45 1802 aa10.1□□□□□ -0.79
CDH11-201ENST00000268603 GP9P14770 177 aa10.1□□□□□ -0.79
CDH11-201ENST00000268603 Q8N8P6 123 aa10.1□□□□□ -0.79
CDH11-201ENST00000268603 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.1□□□□□ -0.79
CDH11-201ENST00000268603 IGKV2-29A2NJV5 120 aaPredicted RBP10.1□□□□□ -0.79
CDH11-201ENST00000268603 HGFACQ04756 655 aa10.1□□□□□ -0.79
CDH11-201ENST00000268603 NPBQ8NG41 125 aa10.1□□□□□ -0.79
CDH11-201ENST00000268603 COX7B2Q8TF08 81 aa10.1□□□□□ -0.79
CDH11-201ENST00000268603 GYPEP15421 78 aa10.1□□□□□ -0.79
CDH11-201ENST00000268603 CEND1Q8N111 149 aa10.1□□□□□ -0.79
CDH11-201ENST00000268603 VSIG2Q96IQ7 327 aa10.1□□□□□ -0.79
CDH11-201ENST00000268603 ARID2Q68CP9 1835 aa10.09□□□□□ -0.79
CDH11-201ENST00000268603 PSMB8P28062 276 aa10.09□□□□□ -0.79
CDH11-201ENST00000268603 TMEM14BQ9NUH8 114 aa10.09□□□□□ -0.79
CDH11-201ENST00000268603 B5MCH6 92 aa10.09□□□□□ -0.79
CDH11-201ENST00000268603 SPART-AS1P0CW21 52 aa10.09□□□□□ -0.79
CDH11-201ENST00000268603 DEFB136Q30KP8 78 aa10.09□□□□□ -0.79
CDH11-201ENST00000268603 C17orf77Q96MU5 243 aa10.09□□□□□ -0.79
CDH11-201ENST00000268603 PI4KAP42356 2102 aa10.09□□□□□ -0.79
CDH11-201ENST00000268603 YLPM1P49750 1951 aaKnown RBP10.09□□□□□ -0.79
CDH11-201ENST00000268603 NCR3O14931 201 aa10.09□□□□□ -0.79
CDH11-201ENST00000268603 CRYGSP22914 178 aa10.09□□□□□ -0.79
CDH11-201ENST00000268603 TMEM75Q8N9X5 138 aa10.09□□□□□ -0.79
CDH11-201ENST00000268603 LINC00479Q96M42 142 aa10.09□□□□□ -0.79
CDH11-201ENST00000268603 IGKV1D-8A0A087WSZ0 117 aa10.09□□□□□ -0.79
CDH11-201ENST00000268603 ZNF134P52741 427 aa10.09□□□□□ -0.79
CDH11-201ENST00000268603 FOXE3Q13461 319 aa10.09□□□□□ -0.79
CDH11-201ENST00000268603 AKAP6Q13023 2319 aa10.08□□□□□ -0.8
CDH11-201ENST00000268603 FAM186AA6NE01 2351 aa10.08□□□□□ -0.8
CDH11-201ENST00000268603 IGHV4OR15-8A0A075B7B6 117 aa10.08□□□□□ -0.8
CDH11-201ENST00000268603 A0A087WW49 117 aa10.08□□□□□ -0.8
CDH11-201ENST00000268603 NREPQ16612 68 aa10.08□□□□□ -0.8
CDH11-201ENST00000268603 MST1P26927 711 aa10.08□□□□□ -0.8
CDH11-201ENST00000268603 BVES-AS1Q5T3Y7 98 aa10.08□□□□□ -0.8
CDH11-201ENST00000268603 APRG1Q8IVJ8 170 aa10.08□□□□□ -0.8
CDH11-201ENST00000268603 LINC00473A8K010 186 aa10.08□□□□□ -0.8
CDH11-201ENST00000268603 NDUFA4O00483 81 aa10.08□□□□□ -0.8
CDH11-201ENST00000268603 NTN5Q8WTR8 489 aaPredicted RBP10.08□□□□□ -0.8
CDH11-201ENST00000268603 HEATR1Q9H583 2144 aaKnown RBP10.08□□□□□ -0.8
CDH11-201ENST00000268603 GGNQ86UU5 652 aa10.08□□□□□ -0.8
CDH11-201ENST00000268603 MESP1Q9BRJ9 268 aa10.08□□□□□ -0.8
CDH11-201ENST00000268603 K7ERJ3 54 aa10.08□□□□□ -0.8
CDH11-201ENST00000268603 MRPL23Q16540 153 aaKnown RBP10.08□□□□□ -0.8
CDH11-201ENST00000268603 GFRA4Q9GZZ7 299 aa10.08□□□□□ -0.8
CDH11-201ENST00000268603 IGKV1D-17A0A075B6S4 117 aa10.07□□□□□ -0.8
CDH11-201ENST00000268603 IGKV3D-7A0A0C4DH55 119 aa10.07□□□□□ -0.8
CDH11-201ENST00000268603 KLHDC3Q9BQ90 382 aa10.07□□□□□ -0.8
CDH11-201ENST00000268603 IGKV1-12A0A0C4DH73 117 aa10.07□□□□□ -0.8
CDH11-201ENST00000268603 C5orf24Q7Z6I8 188 aa10.07□□□□□ -0.8
CDH11-201ENST00000268603 IGKV1-27A0A075B6S5 117 aa10.07□□□□□ -0.8
CDH11-201ENST00000268603 K7EP34 96 aa10.07□□□□□ -0.8
CDH11-201ENST00000268603 NDUFS6O75380 124 aaKnown RBP10.07□□□□□ -0.8
CDH11-201ENST00000268603 IGKV1-16P04430 117 aa10.07□□□□□ -0.8
CDH11-201ENST00000268603 ETV2O00321 342 aaPredicted RBP10.07□□□□□ -0.8
CDH11-201ENST00000268603 H0YIZ8 118 aa10.06□□□□□ -0.8
CDH11-201ENST00000268603 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.06□□□□□ -0.8
CDH11-201ENST00000268603 HLA-DMBP28068 263 aa10.06□□□□□ -0.8
CDH11-201ENST00000268603 MRPL53Q96EL3 112 aaKnown RBP10.06□□□□□ -0.8
CDH11-201ENST00000268603 H3BMG7 143 aa10.06□□□□□ -0.8
CDH11-201ENST00000268603 PDE6HQ13956 83 aa10.06□□□□□ -0.8
CDH11-201ENST00000268603 FAM120AOSQ5T036 256 aa10.06□□□□□ -0.8
CDH11-201ENST00000268603 B9D2Q9BPU9 175 aa10.06□□□□□ -0.8
CDH11-201ENST00000268603 ZNF664Q8N3J9 261 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms