RNA–Protein interactions for RNA: ENST00000266880.11

CHFR-201, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2 BASIC

Gene CHFR, Length 11,133 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-201ENST00000266880 LY96Q9Y6Y9 160 aa9.11□□□□□ -0.95
CHFR-201ENST00000266880 PCNX3Q9H6A9 2034 aa9.11□□□□□ -0.95
CHFR-201ENST00000266880 TMEM141Q96I45 108 aa9.11□□□□□ -0.95
CHFR-201ENST00000266880 LINC00477Q96M19 166 aa9.11□□□□□ -0.95
CHFR-201ENST00000266880 LYNX1G3V0Z9 82 aa9.11□□□□□ -0.95
CHFR-201ENST00000266880 LYNX1P0DP58 116 aa9.11□□□□□ -0.95
CHFR-201ENST00000266880 IGHV1-2P23083 117 aa9.11□□□□□ -0.95
CHFR-201ENST00000266880 TRAV13-2A0A0B4J235 113 aa9.1□□□□□ -0.95
CHFR-201ENST00000266880 A0A1B0GX51 115 aa9.1□□□□□ -0.95
CHFR-201ENST00000266880 NDUFV3P56181 108 aaKnown RBP9.1□□□□□ -0.95
CHFR-201ENST00000266880 DEFB130BP0DP73 79 aa9.1□□□□□ -0.95
CHFR-201ENST00000266880 DEFB130AP0DP74 79 aa9.1□□□□□ -0.95
CHFR-201ENST00000266880 HLA-DRB4P13762 266 aa9.1□□□□□ -0.95
CHFR-201ENST00000266880 NDUFA12Q9UI09 145 aa9.1□□□□□ -0.95
CHFR-201ENST00000266880 HLA-DRB4X5D2U9 266 aa9.1□□□□□ -0.95
CHFR-201ENST00000266880 Q0VG73 95 aa9.1□□□□□ -0.95
CHFR-201ENST00000266880 PRSS22Q9GZN4 317 aa9.1□□□□□ -0.95
CHFR-201ENST00000266880 IGHV2-26A0A0B4J1V2 119 aa9.1□□□□□ -0.95
CHFR-201ENST00000266880 HLA-DMBP28068 263 aa9.1□□□□□ -0.95
CHFR-201ENST00000266880 SRSF7Q16629 238 aaKnown RBP eCLIP9.1□□□□□ -0.95
CHFR-201ENST00000266880 NTF4P34130 210 aa9.1□□□□□ -0.95
CHFR-201ENST00000266880 IGHV4-4A0A075B6R2 117 aa9.1□□□□□ -0.95
CHFR-201ENST00000266880 IGKV1-9A0A0C4DH69 117 aa9.1□□□□□ -0.95
CHFR-201ENST00000266880 RNASE2P10153 161 aaKnown RBP9.1□□□□□ -0.95
CHFR-201ENST00000266880 SUPT4H1P63272 117 aaKnown RBP9.1□□□□□ -0.95
CHFR-201ENST00000266880 SPSB3Q6PJ21 355 aa9.1□□□□□ -0.95
CHFR-201ENST00000266880 ATOX1O00244 68 aa9.1□□□□□ -0.95
CHFR-201ENST00000266880 NTN5Q8WTR8 489 aaPredicted RBP9.1□□□□□ -0.95
CHFR-201ENST00000266880 BAALC-AS2P0C853 105 aa9.09□□□□□ -0.95
CHFR-201ENST00000266880 M0R1W7 72 aa9.09□□□□□ -0.95
CHFR-201ENST00000266880 IGHV1-24A0A0C4DH33 117 aa9.09□□□□□ -0.95
CHFR-201ENST00000266880 IGHV4-28A0A0C4DH34 117 aa9.09□□□□□ -0.95
CHFR-201ENST00000266880 MRPL51Q4U2R6 128 aaKnown RBP9.09□□□□□ -0.95
CHFR-201ENST00000266880 TRPT1Q86TN4 253 aaKnown RBP9.09□□□□□ -0.95
CHFR-201ENST00000266880 ZCCHC24Q8N2G6 241 aaKnown RBP9.09□□□□□ -0.95
CHFR-201ENST00000266880 A0A0G2JMZ2 1700 aa9.09□□□□□ -0.95
CHFR-201ENST00000266880 LRRC37A2A6NM11 1700 aa9.09□□□□□ -0.95
CHFR-201ENST00000266880 LRRC37AA6NMS7 1700 aa9.09□□□□□ -0.95
CHFR-201ENST00000266880 ZNF561-AS1K7EIQ3 104 aa9.09□□□□□ -0.95
CHFR-201ENST00000266880 UCNP55089 124 aa9.09□□□□□ -0.95
CHFR-201ENST00000266880 FAM104BQ5XKR9 115 aa9.09□□□□□ -0.95
CHFR-201ENST00000266880 CTHRC1Q96CG8 243 aa9.09□□□□□ -0.95
CHFR-201ENST00000266880 RBX1P62877 108 aa9.09□□□□□ -0.95
CHFR-201ENST00000266880 CHCHD2Q9Y6H1 151 aaPredicted RBP9.09□□□□□ -0.95
CHFR-201ENST00000266880 COL24A1Q17RW2 1714 aa9.09□□□□□ -0.95
CHFR-201ENST00000266880 C17orf100A8MU93 164 aa9.08□□□□□ -0.96
CHFR-201ENST00000266880 CRYGCP07315 174 aa9.08□□□□□ -0.96
CHFR-201ENST00000266880 KLF5Q13887 457 aaPredicted RBP9.08□□□□□ -0.96
CHFR-201ENST00000266880 RNASE13Q5GAN3 156 aaKnown RBP9.08□□□□□ -0.96
CHFR-201ENST00000266880 NRN1LQ496H8 165 aa9.08□□□□□ -0.96
CHFR-201ENST00000266880 Q8N8P6 123 aa9.08□□□□□ -0.96
CHFR-201ENST00000266880 NHSL1Q5SYE7 1610 aa9.08□□□□□ -0.96
CHFR-201ENST00000266880 IGKV1-5P01602 117 aa9.08□□□□□ -0.96
CHFR-201ENST00000266880 TMEM190Q8WZ59 177 aa9.08□□□□□ -0.96
CHFR-201ENST00000266880 SHANK3Q9BYB0 1731 aa9.08□□□□□ -0.96
CHFR-201ENST00000266880 LIME1Q9H400 295 aa9.08□□□□□ -0.96
CHFR-201ENST00000266880 AHDC1Q5TGY3 1603 aaPredicted RBP9.08□□□□□ -0.96
CHFR-201ENST00000266880 HIVEP3Q5T1R4 2406 aa9.08□□□□□ -0.96
CHFR-201ENST00000266880 SLC25A45Q8N413 288 aa9.08□□□□□ -0.96
CHFR-201ENST00000266880 WBP1Q96G27 269 aa9.08□□□□□ -0.96
CHFR-201ENST00000266880 IGLL1P15814 213 aa9.08□□□□□ -0.96
CHFR-201ENST00000266880 KLK9Q9UKQ9 250 aa9.08□□□□□ -0.96
CHFR-201ENST00000266880 MDS2Q8NDY4 140 aa9.07□□□□□ -0.96
CHFR-201ENST00000266880 C14orf132Q9NPU4 83 aa9.07□□□□□ -0.96
CHFR-201ENST00000266880 ASPHD1Q5U4P2 390 aa9.07□□□□□ -0.96
CHFR-201ENST00000266880 CLPSL2Q6UWE3 100 aa9.07□□□□□ -0.96
CHFR-201ENST00000266880 PNRC2Q9NPJ4 139 aaKnown RBP9.07□□□□□ -0.96
CHFR-201ENST00000266880 FAM240AA0A1B0GVK7 77 aa9.07□□□□□ -0.96
CHFR-201ENST00000266880 GFRA4Q9GZZ7 299 aa9.07□□□□□ -0.96
CHFR-201ENST00000266880 IGHV3-38A0A0C4DH36 116 aa9.07□□□□□ -0.96
CHFR-201ENST00000266880 STPG1Q5TH74 334 aa9.07□□□□□ -0.96
CHFR-201ENST00000266880 TIAF1O95411 115 aa9.07□□□□□ -0.96
CHFR-201ENST00000266880 C12orf74Q32Q52 190 aa9.07□□□□□ -0.96
CHFR-201ENST00000266880 SH2D6Q7Z4S9 175 aa9.07□□□□□ -0.96
CHFR-201ENST00000266880 C8orf31Q8N9H6 132 aa9.07□□□□□ -0.96
CHFR-201ENST00000266880 SIGLEC8Q9NYZ4 499 aa9.07□□□□□ -0.96
CHFR-201ENST00000266880 DENND4CQ5VZ89 1909 aa9.07□□□□□ -0.96
CHFR-201ENST00000266880 I3L3M4 83 aa9.07□□□□□ -0.96
CHFR-201ENST00000266880 WFDC11Q8NEX6 87 aa9.07□□□□□ -0.96
CHFR-201ENST00000266880 MST1P26927 711 aa9.07□□□□□ -0.96
CHFR-201ENST00000266880 NMSQ5H8A3 153 aa9.07□□□□□ -0.96
CHFR-201ENST00000266880 VMO1Q7Z5L0 202 aa9.06□□□□□ -0.96
CHFR-201ENST00000266880 THBDP07204 575 aa9.06□□□□□ -0.96
CHFR-201ENST00000266880 TRBV7-1A0A0A6YYK4 115 aa9.06□□□□□ -0.96
CHFR-201ENST00000266880 KIR2DL5BA0A0G2JN68 375 aa9.06□□□□□ -0.96
CHFR-201ENST00000266880 KIR2DL5BA0A0G2JPC4 375 aa9.06□□□□□ -0.96
CHFR-201ENST00000266880 KIR2DL5AQ8N109 375 aa9.06□□□□□ -0.96
CHFR-201ENST00000266880 F6UB75 175 aa9.06□□□□□ -0.96
CHFR-201ENST00000266880 RHODO00212 210 aa9.06□□□□□ -0.96
CHFR-201ENST00000266880 WIPF2Q8TF74 440 aaPredicted RBP9.06□□□□□ -0.96
CHFR-201ENST00000266880 C9JQL5 133 aa9.06□□□□□ -0.96
CHFR-201ENST00000266880 C5orf24Q7Z6I8 188 aa9.06□□□□□ -0.96
CHFR-201ENST00000266880 C2orf66Q6UXQ4 117 aa9.06□□□□□ -0.96
CHFR-201ENST00000266880 C9orf106Q8NAJ2 232 aa9.06□□□□□ -0.96
CHFR-201ENST00000266880 ORMDL1Q9P0S3 153 aa9.06□□□□□ -0.96
CHFR-201ENST00000266880 SMIM10L1P0DMW3 83 aa9.06□□□□□ -0.96
CHFR-201ENST00000266880 SMIM10Q96HG1 83 aa9.06□□□□□ -0.96
CHFR-201ENST00000266880 CLPSP04118 112 aa9.05□□□□□ -0.96
CHFR-201ENST00000266880 TMEM14EPQ6UXP3 125 aa9.05□□□□□ -0.96
CHFR-201ENST00000266880 SMIM9A6NGZ8 99 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 107.3 ms