RNA–Protein interactions for RNA: ENST00000263956.7

GTF3C3-201, Transcript of general transcription factor IIIC subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C3, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-201ENST00000263956 HTN3P15516 51 aa6.35□□□□□ -1.39
GTF3C3-201ENST00000263956 SPINK13Q1W4C9 94 aa6.35□□□□□ -1.39
GTF3C3-201ENST00000263956 Q86TA4 180 aa6.35□□□□□ -1.39
GTF3C3-201ENST00000263956 TMEM75Q8N9X5 138 aa6.35□□□□□ -1.39
GTF3C3-201ENST00000263956 C17orf77Q96MU5 243 aa6.35□□□□□ -1.39
GTF3C3-201ENST00000263956 IL36BQ9NZH7 164 aa6.35□□□□□ -1.39
GTF3C3-201ENST00000263956 GGTLC3B5MD39 225 aa6.35□□□□□ -1.39
GTF3C3-201ENST00000263956 PRSS46E5RG02 174 aa6.35□□□□□ -1.39
GTF3C3-201ENST00000263956 HLA-DQA1P01909 254 aa6.35□□□□□ -1.39
GTF3C3-201ENST00000263956 CSN3P07498 182 aa6.35□□□□□ -1.39
GTF3C3-201ENST00000263956 CKS2P33552 79 aa6.35□□□□□ -1.39
GTF3C3-201ENST00000263956 DERL1Q9BUN8 251 aa6.35□□□□□ -1.39
GTF3C3-201ENST00000263956 LY96Q9Y6Y9 160 aa6.35□□□□□ -1.39
GTF3C3-201ENST00000263956 CHD6Q8TD26 2715 aa6.35□□□□□ -1.39
GTF3C3-201ENST00000263956 H7C1H1 209 aa6.35□□□□□ -1.39
GTF3C3-201ENST00000263956 FCER1GP30273 86 aa6.35□□□□□ -1.39
GTF3C3-201ENST00000263956 ZNF415Q09FC8 603 aa6.35□□□□□ -1.39
GTF3C3-201ENST00000263956 TMEM61Q8N0U2 210 aa6.35□□□□□ -1.39
GTF3C3-201ENST00000263956 LINC00479Q96M42 142 aa6.35□□□□□ -1.39
GTF3C3-201ENST00000263956 SETD2Q9BYW2 2564 aaPredicted RBP6.34□□□□□ -1.39
GTF3C3-201ENST00000263956 CA1P00915 261 aaPredicted RBP6.34□□□□□ -1.39
GTF3C3-201ENST00000263956 FSHBP01225 129 aa6.34□□□□□ -1.39
GTF3C3-201ENST00000263956 A0A1B0GW15 77 aa6.34□□□□□ -1.39
GTF3C3-201ENST00000263956 HSBP1L1C9JCN9 74 aa6.34□□□□□ -1.39
GTF3C3-201ENST00000263956 CRISP2P16562 243 aa6.34□□□□□ -1.39
GTF3C3-201ENST00000263956 CDKN1BP46527 198 aa6.34□□□□□ -1.39
GTF3C3-201ENST00000263956 HBBP68871 147 aa6.34□□□□□ -1.39
GTF3C3-201ENST00000263956 S100A12P80511 92 aa6.34□□□□□ -1.39
GTF3C3-201ENST00000263956 OR2K2Q8NGT1 345 aa6.34□□□□□ -1.39
GTF3C3-201ENST00000263956 ESM1Q9NQ30 184 aa6.34□□□□□ -1.39
GTF3C3-201ENST00000263956 SH2D1AO60880 128 aa6.34□□□□□ -1.39
GTF3C3-201ENST00000263956 RNASEKQ6P5S7 137 aaKnown RBP6.34□□□□□ -1.39
GTF3C3-201ENST00000263956 FN1P02751 2386 aaKnown RBP6.34□□□□□ -1.39
GTF3C3-201ENST00000263956 TANC2Q9HCD6 1990 aa6.34□□□□□ -1.4
GTF3C3-201ENST00000263956 MUC21A0A0G2JKD1 596 aa6.33□□□□□ -1.4
GTF3C3-201ENST00000263956 MUC21A0A140T8X8 626 aa6.33□□□□□ -1.4
GTF3C3-201ENST00000263956 F2Z2F3 143 aa6.33□□□□□ -1.4
GTF3C3-201ENST00000263956 HLA-DMBP28068 263 aa6.33□□□□□ -1.4
GTF3C3-201ENST00000263956 CACNG7P62955 275 aa6.33□□□□□ -1.4
GTF3C3-201ENST00000263956 MORN5Q5VZ52 161 aa6.33□□□□□ -1.4
GTF3C3-201ENST00000263956 NUDT10Q8NFP7 164 aa6.33□□□□□ -1.4
GTF3C3-201ENST00000263956 SMIM12Q96EX1 92 aa6.33□□□□□ -1.4
GTF3C3-201ENST00000263956 NUDT11Q96G61 164 aa6.33□□□□□ -1.4
GTF3C3-201ENST00000263956 RCHY1Q96PM5 261 aa6.33□□□□□ -1.4
GTF3C3-201ENST00000263956 C7orf71A4D174 169 aa6.33□□□□□ -1.4
GTF3C3-201ENST00000263956 SMAGPQ0VAQ4 97 aa6.33□□□□□ -1.4
GTF3C3-201ENST00000263956 WIPF2Q8TF74 440 aaPredicted RBP6.33□□□□□ -1.4
GTF3C3-201ENST00000263956 AP1S3Q96PC3 154 aa6.33□□□□□ -1.4
GTF3C3-201ENST00000263956 LINC01551Q86U37 167 aa6.33□□□□□ -1.4
GTF3C3-201ENST00000263956 FAM167A-AS1Q96KT0 104 aa6.33□□□□□ -1.4
GTF3C3-201ENST00000263956 PRR25Q96S07 402 aa6.33□□□□□ -1.4
GTF3C3-201ENST00000263956 HIGD1CA8MV81 97 aa6.33□□□□□ -1.4
GTF3C3-201ENST00000263956 NPIPB6E9PJ23 425 aa6.33□□□□□ -1.4
GTF3C3-201ENST00000263956 H3BVH4 76 aa6.33□□□□□ -1.4
GTF3C3-201ENST00000263956 BRI3O95415 125 aa6.33□□□□□ -1.4
GTF3C3-201ENST00000263956 APOHP02749 345 aaPredicted RBP6.33□□□□□ -1.4
GTF3C3-201ENST00000263956 KLF5Q13887 457 aaPredicted RBP6.33□□□□□ -1.4
GTF3C3-201ENST00000263956 F6UB75 175 aa6.32□□□□□ -1.4
GTF3C3-201ENST00000263956 G0S2P27469 103 aa6.32□□□□□ -1.4
GTF3C3-201ENST00000263956 PMS2P11Q13670 270 aa6.32□□□□□ -1.4
GTF3C3-201ENST00000263956 APRG1Q8IVJ8 170 aa6.32□□□□□ -1.4
GTF3C3-201ENST00000263956 LENEPQ9Y5L5 61 aa6.32□□□□□ -1.4
GTF3C3-201ENST00000263956 A0A087WWC5 75 aa6.32□□□□□ -1.4
GTF3C3-201ENST00000263956 TMEM213A2RRL7 107 aa6.32□□□□□ -1.4
GTF3C3-201ENST00000263956 IZUMO1RA6ND01 250 aa6.32□□□□□ -1.4
GTF3C3-201ENST00000263956 H0Y8G0 127 aa6.32□□□□□ -1.4
GTF3C3-201ENST00000263956 PPP1R17O96001 155 aa6.32□□□□□ -1.4
GTF3C3-201ENST00000263956 DEFB114Q30KQ6 69 aa6.32□□□□□ -1.4
GTF3C3-201ENST00000263956 KRTAP1-3Q8IUG1 177 aa6.32□□□□□ -1.4
GTF3C3-201ENST00000263956 TSKUQ8WUA8 353 aa6.32□□□□□ -1.4
GTF3C3-201ENST00000263956 AGPAT4-IT1Q9H0P7 198 aa6.32□□□□□ -1.4
GTF3C3-201ENST00000263956 TRAV9-1A0A075B6T8 112 aa6.32□□□□□ -1.4
GTF3C3-201ENST00000263956 TRGV4A0A0C4DH28 118 aa6.32□□□□□ -1.4
GTF3C3-201ENST00000263956 RBAKDNA6NC62 111 aa6.32□□□□□ -1.4
GTF3C3-201ENST00000263956 ARL6IP6Q8N6S5 226 aa6.32□□□□□ -1.4
GTF3C3-201ENST00000263956 VGLL1Q99990 258 aa6.32□□□□□ -1.4
GTF3C3-201ENST00000263956 TRGV1A0A0A0MS02 117 aa6.31□□□□□ -1.4
GTF3C3-201ENST00000263956 M0R2Z0 102 aa6.31□□□□□ -1.4
GTF3C3-201ENST00000263956 PFN1P07737 140 aaKnown RBP6.31□□□□□ -1.4
GTF3C3-201ENST00000263956 MORN3Q6PF18 240 aaPredicted RBP6.31□□□□□ -1.4
GTF3C3-201ENST00000263956 C11orf52Q96A22 123 aa6.31□□□□□ -1.4
GTF3C3-201ENST00000263956 ZFAND3Q9H8U3 227 aa6.31□□□□□ -1.4
GTF3C3-201ENST00000263956 TNFRSF18Q9Y5U5 241 aa6.31□□□□□ -1.4
GTF3C3-201ENST00000263956 CENPEQ02224 2701 aa6.31□□□□□ -1.4
GTF3C3-201ENST00000263956 A0A087X0K7 114 aa6.31□□□□□ -1.4
GTF3C3-201ENST00000263956 LOC102724200A0A096LPH7 203 aaPredicted RBP6.31□□□□□ -1.4
GTF3C3-201ENST00000263956 C18orf65Q6ZTR6 163 aa6.31□□□□□ -1.4
GTF3C3-201ENST00000263956 ZMAT4Q9H898 229 aa6.31□□□□□ -1.4
GTF3C3-201ENST00000263956 TRBV20OR9-2A0A075B6H5 130 aa6.31□□□□□ -1.4
GTF3C3-201ENST00000263956 IGHV1OR15-1A0A075B7D0 117 aa6.31□□□□□ -1.4
GTF3C3-201ENST00000263956 HIST2H2BDQ6DRA6 164 aa6.31□□□□□ -1.4
GTF3C3-201ENST00000263956 C2CD4CQ8TF44 421 aa6.31□□□□□ -1.4
GTF3C3-201ENST00000263956 MAP1LC3AQ9H492 121 aa6.31□□□□□ -1.4
GTF3C3-201ENST00000263956 ZNF256Q9Y2P7 627 aaPredicted RBP6.31□□□□□ -1.4
GTF3C3-201ENST00000263956 TRAV12-2A0A075B6T6 113 aa6.3□□□□□ -1.4
GTF3C3-201ENST00000263956 Q8N2B8 174 aa6.3□□□□□ -1.4
GTF3C3-201ENST00000263956 TMEM18Q96B42 140 aa6.3□□□□□ -1.4
GTF3C3-201ENST00000263956 DMRT1Q9Y5R6 373 aa6.3□□□□□ -1.4
GTF3C3-201ENST00000263956 SMAD5-AS1Q9Y6J3 95 aa6.3□□□□□ -1.4
GTF3C3-201ENST00000263956 PMCHP20382 165 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms