RNA–Protein interactions for RNA: ENST00000263066.10

LDB3-201, Transcript of LIM domain binding 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LDB3, Length 3,873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-201ENST00000263066 C15orf62A8K5M9 175 aa6.75□□□□□ -1.33
LDB3-201ENST00000263066 CRXO43186 299 aaPredicted RBP6.75□□□□□ -1.33
LDB3-201ENST00000263066 CCL1P22362 96 aa6.75□□□□□ -1.33
LDB3-201ENST00000263066 COL8A2P25067 703 aa6.75□□□□□ -1.33
LDB3-201ENST00000263066 Q8TCH9 128 aa6.75□□□□□ -1.33
LDB3-201ENST00000263066 TRAV40A0A0B4J280 105 aa6.75□□□□□ -1.33
LDB3-201ENST00000263066 FAM236AA0A1B0GUQ0 79 aa6.75□□□□□ -1.33
LDB3-201ENST00000263066 FAM236BA0A1B0GV22 79 aa6.75□□□□□ -1.33
LDB3-201ENST00000263066 RHODO00212 210 aa6.75□□□□□ -1.33
LDB3-201ENST00000263066 CECR9P0C854 216 aa6.75□□□□□ -1.33
LDB3-201ENST00000263066 COX7A1P24310 79 aa6.75□□□□□ -1.33
LDB3-201ENST00000263066 PRADC1Q9BSG0 188 aa6.75□□□□□ -1.33
LDB3-201ENST00000263066 SPRY4Q9C004 299 aa6.75□□□□□ -1.33
LDB3-201ENST00000263066 TNRC6BQ9UPQ9 1833 aaKnown RBP6.74□□□□□ -1.33
LDB3-201ENST00000263066 MGST3O14880 152 aa6.74□□□□□ -1.33
LDB3-201ENST00000263066 SLC25A20O43772 301 aa6.74□□□□□ -1.33
LDB3-201ENST00000263066 TNFRSF1AP19438 455 aa6.74□□□□□ -1.33
LDB3-201ENST00000263066 SLC25A47Q6Q0C1 308 aa6.74□□□□□ -1.33
LDB3-201ENST00000263066 C11orf52Q96A22 123 aa6.74□□□□□ -1.33
LDB3-201ENST00000263066 SMKR1H3BMG3 65 aa6.74□□□□□ -1.33
LDB3-201ENST00000263066 DIAPH2-AS1Q14236 149 aa6.74□□□□□ -1.33
LDB3-201ENST00000263066 PLGLAQ15195 96 aa6.74□□□□□ -1.33
LDB3-201ENST00000263066 NXT2Q9NPJ8 142 aaKnown RBP6.74□□□□□ -1.33
LDB3-201ENST00000263066 IGHMP01871 453 aa6.74□□□□□ -1.33
LDB3-201ENST00000263066 C2orf83Q53S99 150 aa6.74□□□□□ -1.33
LDB3-201ENST00000263066 HRCT1Q6UXD1 115 aa6.74□□□□□ -1.33
LDB3-201ENST00000263066 TMEM101Q96IK0 257 aa6.74□□□□□ -1.33
LDB3-201ENST00000263066 OOSP1A8MZH6 123 aa6.73□□□□□ -1.33
LDB3-201ENST00000263066 LOXL3P58215 753 aa6.73□□□□□ -1.33
LDB3-201ENST00000263066 ZNF415Q09FC8 603 aa6.73□□□□□ -1.33
LDB3-201ENST00000263066 ZFP2Q6ZN57 461 aa6.73□□□□□ -1.33
LDB3-201ENST00000263066 Q6ZQT7 251 aa6.73□□□□□ -1.33
LDB3-201ENST00000263066 GOLT1AQ6ZVE7 132 aa6.73□□□□□ -1.33
LDB3-201ENST00000263066 DNAJC30Q96LL9 226 aa6.73□□□□□ -1.33
LDB3-201ENST00000263066 ATRQ13535 2644 aa6.73□□□□□ -1.33
LDB3-201ENST00000263066 ZNF815PA8K554 130 aa6.73□□□□□ -1.33
LDB3-201ENST00000263066 FGF6P10767 208 aa6.73□□□□□ -1.33
LDB3-201ENST00000263066 HERVK_113P63121 156 aa6.73□□□□□ -1.33
LDB3-201ENST00000263066 C20orf204Q6ZNR8 217 aa6.73□□□□□ -1.33
LDB3-201ENST00000263066 WIPF2Q8TF74 440 aaPredicted RBP6.73□□□□□ -1.33
LDB3-201ENST00000263066 ITLN1Q8WWA0 313 aa6.73□□□□□ -1.33
LDB3-201ENST00000263066 ARMS2P0C7Q2 107 aa6.73□□□□□ -1.33
LDB3-201ENST00000263066 HLA-DRB4P13762 266 aa6.73□□□□□ -1.33
LDB3-201ENST00000263066 KHDC1LQ5JSQ8 128 aa6.73□□□□□ -1.33
LDB3-201ENST00000263066 Q6ZT83 130 aa6.73□□□□□ -1.33
LDB3-201ENST00000263066 NFE4Q86UQ8 179 aa6.73□□□□□ -1.33
LDB3-201ENST00000263066 HS3ST6Q96QI5 342 aa6.73□□□□□ -1.33
LDB3-201ENST00000263066 CALYQ9NYX4 217 aa6.73□□□□□ -1.33
LDB3-201ENST00000263066 HLA-DRB4X5D2U9 266 aa6.73□□□□□ -1.33
LDB3-201ENST00000263066 ADGRG4Q8IZF6 3080 aa6.72□□□□□ -1.33
LDB3-201ENST00000263066 PLXNB1O43157 2135 aa6.72□□□□□ -1.33
LDB3-201ENST00000263066 ARHGAP32A7KAX9 2087 aa6.72□□□□□ -1.33
LDB3-201ENST00000263066 TMEM30CPA0ZSE6 113 aa6.72□□□□□ -1.33
LDB3-201ENST00000263066 ASCL2Q99929 193 aa6.72□□□□□ -1.33
LDB3-201ENST00000263066 C21orf62Q9NYP8 219 aa6.72□□□□□ -1.33
LDB3-201ENST00000263066 CENPVL3A0A0U1RRI6 287 aa6.72□□□□□ -1.33
LDB3-201ENST00000263066 OOEPA6NGQ2 149 aa6.72□□□□□ -1.33
LDB3-201ENST00000263066 PRSS2P07478 247 aa6.72□□□□□ -1.33
LDB3-201ENST00000263066 ASIPP42127 132 aa6.72□□□□□ -1.33
LDB3-201ENST00000263066 FAM27BQ5VT28 67 aa6.72□□□□□ -1.33
LDB3-201ENST00000263066 GATD1Q8NB37 220 aa6.72□□□□□ -1.33
LDB3-201ENST00000263066 OR11H6Q8NGC7 330 aa6.72□□□□□ -1.33
LDB3-201ENST00000263066 ATP6V0E2Q8NHE4 81 aa6.72□□□□□ -1.33
LDB3-201ENST00000263066 F8P00451 2351 aa6.72□□□□□ -1.33
LDB3-201ENST00000263066 WNT9BO14905 357 aa6.72□□□□□ -1.33
LDB3-201ENST00000263066 RBP4P02753 201 aa6.72□□□□□ -1.33
LDB3-201ENST00000263066 CD7P09564 240 aa6.72□□□□□ -1.33
LDB3-201ENST00000263066 AMN1Q8IY45 258 aa6.72□□□□□ -1.33
LDB3-201ENST00000263066 KLK5Q9Y337 293 aaPredicted RBP6.72□□□□□ -1.33
LDB3-201ENST00000263066 A0A087WX48 190 aa6.71□□□□□ -1.33
LDB3-201ENST00000263066 ERHP84090 104 aaKnown RBP6.71□□□□□ -1.33
LDB3-201ENST00000263066 PSMG4Q5JS54 123 aa6.71□□□□□ -1.33
LDB3-201ENST00000263066 OR9G1Q8NH87 305 aa6.71□□□□□ -1.33
LDB3-201ENST00000263066 KLF14Q8TD94 323 aaPredicted RBP6.71□□□□□ -1.33
LDB3-201ENST00000263066 AGRNO00468 2067 aa6.71□□□□□ -1.34
LDB3-201ENST00000263066 CPAMD8Q8IZJ3 1885 aa6.71□□□□□ -1.34
LDB3-201ENST00000263066 IGHV3-21A0A0B4J1V1 117 aa6.71□□□□□ -1.34
LDB3-201ENST00000263066 MYMXA0A1B0GTQ4 84 aa6.71□□□□□ -1.34
LDB3-201ENST00000263066 DLX1P56177 255 aa6.71□□□□□ -1.34
LDB3-201ENST00000263066 B3GALT5-AS1P59052 145 aa6.71□□□□□ -1.34
LDB3-201ENST00000263066 AJUBAQ96IF1 538 aa6.71□□□□□ -1.34
LDB3-201ENST00000263066 CCL13Q99616 98 aa6.71□□□□□ -1.34
LDB3-201ENST00000263066 SLC25A10Q9UBX3 287 aaPredicted RBP6.71□□□□□ -1.34
LDB3-201ENST00000263066 MPV17P39210 176 aa6.71□□□□□ -1.34
LDB3-201ENST00000263066 LOXL1Q08397 574 aaPredicted RBP6.71□□□□□ -1.34
LDB3-201ENST00000263066 C2orf82Q6UX34 121 aa6.71□□□□□ -1.34
LDB3-201ENST00000263066 MOB3BQ86TA1 216 aa6.71□□□□□ -1.34
LDB3-201ENST00000263066 OR13A1Q8NGR1 328 aa6.71□□□□□ -1.34
LDB3-201ENST00000263066 IGKV2D-26A0A0A0MRZ7 120 aa6.7□□□□□ -1.34
LDB3-201ENST00000263066 NDUFS7O75251 213 aa6.7□□□□□ -1.34
LDB3-201ENST00000263066 TRACP01848 142 aa6.7□□□□□ -1.34
LDB3-201ENST00000263066 ORM1P02763 201 aa6.7□□□□□ -1.34
LDB3-201ENST00000263066 APELAP0DMC3 54 aa6.7□□□□□ -1.34
LDB3-201ENST00000263066 FAM120AOSQ5T036 256 aa6.7□□□□□ -1.34
LDB3-201ENST00000263066 URB1-AS1Q96HZ7 61 aa6.7□□□□□ -1.34
LDB3-201ENST00000263066 A0A1W2PPI3 338 aa6.7□□□□□ -1.34
LDB3-201ENST00000263066 RS1O15537 224 aa6.7□□□□□ -1.34
LDB3-201ENST00000263066 KIR2DS2P43631 304 aa6.7□□□□□ -1.34
LDB3-201ENST00000263066 FAM90A10PA6NDY2 464 aa6.7□□□□□ -1.34
LDB3-201ENST00000263066 FAM90A18PA6NE21 464 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms