RNA–Protein interactions for RNA: ENST00000262539.7

PTPN3-201, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 5 BASIC

Gene PTPN3, Length 6,832 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-201ENST00000262539 COA6Q5JTJ3 125 aaKnown RBP6.55□□□□□ -1.36
PTPN3-201ENST00000262539 TMEM256Q8N2U0 113 aa6.55□□□□□ -1.36
PTPN3-201ENST00000262539 NKAPP1Q8N9T2 125 aa6.55□□□□□ -1.36
PTPN3-201ENST00000262539 TMEM126AQ9H061 195 aa6.55□□□□□ -1.36
PTPN3-201ENST00000262539 PRDM13Q9H4Q3 707 aa6.55□□□□□ -1.36
PTPN3-201ENST00000262539 PTPN13Q12923 2485 aa6.54□□□□□ -1.36
PTPN3-201ENST00000262539 SNAI2O43623 268 aa6.54□□□□□ -1.36
PTPN3-201ENST00000262539 PPBPP02775 128 aa6.54□□□□□ -1.36
PTPN3-201ENST00000262539 TCRAP04437 139 aa6.54□□□□□ -1.36
PTPN3-201ENST00000262539 TP53BP1Q12888 1972 aaPredicted RBP6.54□□□□□ -1.36
PTPN3-201ENST00000262539 IGKV2-40A0A087WW87 121 aaPredicted RBP6.54□□□□□ -1.36
PTPN3-201ENST00000262539 LY6HO94772 140 aa6.54□□□□□ -1.36
PTPN3-201ENST00000262539 IGKV2D-40P01614 121 aaPredicted RBP6.54□□□□□ -1.36
PTPN3-201ENST00000262539 PIEZO2Q9H5I5 2752 aa6.54□□□□□ -1.36
PTPN3-201ENST00000262539 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.54□□□□□ -1.362e-8■■■■■ 31.6
PTPN3-201ENST00000262539 SRRM4A7MD48 611 aaKnown RBP6.54□□□□□ -1.36
PTPN3-201ENST00000262539 C6orf226Q5I0X4 101 aa6.54□□□□□ -1.36
PTPN3-201ENST00000262539 CHTOPQ9Y3Y2 248 aaKnown RBP6.54□□□□□ -1.36
PTPN3-201ENST00000262539 NAV3Q8IVL0 2385 aa6.54□□□□□ -1.36
PTPN3-201ENST00000262539 IGLV2-23P01705 113 aa6.54□□□□□ -1.36
PTPN3-201ENST00000262539 CRYGBP07316 175 aa6.54□□□□□ -1.36
PTPN3-201ENST00000262539 PFN1P07737 140 aaKnown RBP6.54□□□□□ -1.36
PTPN3-201ENST00000262539 ADCYAP1P18509 176 aa6.54□□□□□ -1.36
PTPN3-201ENST00000262539 SRSF1Q07955 248 aaKnown RBP eCLIP6.54□□□□□ -1.36
PTPN3-201ENST00000262539 PEF1Q9UBV8 284 aaKnown RBP6.54□□□□□ -1.36
PTPN3-201ENST00000262539 EPG5Q9HCE0 2579 aa6.54□□□□□ -1.36
PTPN3-201ENST00000262539 TMEM170AQ8WVE7 144 aa6.54□□□□□ -1.36
PTPN3-201ENST00000262539 CYSLTR1Q9Y271 337 aa6.54□□□□□ -1.36
PTPN3-201ENST00000262539 CXCL1P09341 107 aa6.53□□□□□ -1.36
PTPN3-201ENST00000262539 SAA4P35542 130 aa6.53□□□□□ -1.36
PTPN3-201ENST00000262539 PKIAP61925 76 aa6.53□□□□□ -1.36
PTPN3-201ENST00000262539 ORMDL3Q8N138 153 aa6.53□□□□□ -1.36
PTPN3-201ENST00000262539 HEATR1Q9H583 2144 aaKnown RBP6.53□□□□□ -1.36
PTPN3-201ENST00000262539 ZNF292O60281 2723 aa6.53□□□□□ -1.36
PTPN3-201ENST00000262539 CRIP2P52943 208 aaPredicted RBP6.53□□□□□ -1.36
PTPN3-201ENST00000262539 CFHR4Q92496 578 aa6.53□□□□□ -1.36
PTPN3-201ENST00000262539 CENPVL3A0A0U1RRI6 287 aa6.53□□□□□ -1.36
PTPN3-201ENST00000262539 ZNF98A6NK75 572 aa6.53□□□□□ -1.36
PTPN3-201ENST00000262539 TRGC2P03986 189 aa6.53□□□□□ -1.36
PTPN3-201ENST00000262539 KLK9Q2XQG4 91 aa6.53□□□□□ -1.36
PTPN3-201ENST00000262539 SUMO4Q6EEV6 95 aa6.53□□□□□ -1.36
PTPN3-201ENST00000262539 MORN3Q6PF18 240 aaPredicted RBP6.53□□□□□ -1.36
PTPN3-201ENST00000262539 KLK9Q9UKQ9 250 aa6.53□□□□□ -1.36
PTPN3-201ENST00000262539 KMT2EQ8IZD2 1858 aa6.53□□□□□ -1.36
PTPN3-201ENST00000262539 C22orf34Q6ZV56 151 aa6.53□□□□□ -1.36
PTPN3-201ENST00000262539 TSKUQ8WUA8 353 aa6.53□□□□□ -1.36
PTPN3-201ENST00000262539 IGLV11-55A0A075B6I3 123 aa6.53□□□□□ -1.36
PTPN3-201ENST00000262539 FOXE3Q13461 319 aa6.53□□□□□ -1.36
PTPN3-201ENST00000262539 GNB1LQ9BYB4 327 aa6.53□□□□□ -1.36
PTPN3-201ENST00000262539 SLC17A3O00476 420 aa6.53□□□□□ -1.36
PTPN3-201ENST00000262539 ZNF876PQ49A33 203 aa6.53□□□□□ -1.36
PTPN3-201ENST00000262539 C10orf55Q5SWW7 151 aa6.53□□□□□ -1.36
PTPN3-201ENST00000262539 Q8N6K4 173 aa6.53□□□□□ -1.36
PTPN3-201ENST00000262539 ZNF726P1Q15940 193 aa6.52□□□□□ -1.37
PTPN3-201ENST00000262539 MEGF9Q9H1U4 602 aa6.52□□□□□ -1.37
PTPN3-201ENST00000262539 C16orf54Q6UWD8 224 aa6.52□□□□□ -1.37
PTPN3-201ENST00000262539 VSIRQ9H7M9 311 aa6.52□□□□□ -1.37
PTPN3-201ENST00000262539 MED12LQ86YW9 2145 aa6.52□□□□□ -1.37
PTPN3-201ENST00000262539 PRB1P04280 392 aa6.52□□□□□ -1.37
PTPN3-201ENST00000262539 SLC25A39Q9BZJ4 359 aaPredicted RBP6.52□□□□□ -1.37
PTPN3-201ENST00000262539 EML6Q6ZMW3 1958 aa6.52□□□□□ -1.37
PTPN3-201ENST00000262539 DEFB131AP59861 70 aa6.52□□□□□ -1.37
PTPN3-201ENST00000262539 C1orf159Q96HA4 380 aa6.52□□□□□ -1.37
PTPN3-201ENST00000262539 SCRT1Q9BWW7 348 aa6.52□□□□□ -1.37
PTPN3-201ENST00000262539 IZUMO1RA6ND01 250 aa6.52□□□□□ -1.37
PTPN3-201ENST00000262539 DUX4L9Q6RFH8 374 aaPredicted RBP6.52□□□□□ -1.37
PTPN3-201ENST00000262539 SFTA2Q6UW10 78 aa6.52□□□□□ -1.37
PTPN3-201ENST00000262539 ATRAIDQ6UW56 229 aa6.52□□□□□ -1.37
PTPN3-201ENST00000262539 FNDC4Q9H6D8 234 aaPredicted RBP6.52□□□□□ -1.37
PTPN3-201ENST00000262539 XCL2Q9UBD3 114 aa6.52□□□□□ -1.37
PTPN3-201ENST00000262539 LAMTOR2Q9Y2Q5 125 aa6.52□□□□□ -1.37
PTPN3-201ENST00000262539 KLF12Q9Y4X4 402 aa6.52□□□□□ -1.37
PTPN3-201ENST00000262539 NDUFA4O00483 81 aa6.51□□□□□ -1.37
PTPN3-201ENST00000262539 Q8N7P7 452 aa6.51□□□□□ -1.37
PTPN3-201ENST00000262539 ATP5G3P48201 142 aa6.51□□□□□ -1.37
PTPN3-201ENST00000262539 C5orf24Q7Z6I8 188 aa6.51□□□□□ -1.37
PTPN3-201ENST00000262539 RASL10AQ92737 203 aa6.51□□□□□ -1.37
PTPN3-201ENST00000262539 PCNX3Q9H6A9 2034 aa6.51□□□□□ -1.37
PTPN3-201ENST00000262539 H3BRN7 92 aa6.51□□□□□ -1.37
PTPN3-201ENST00000262539 UQCR10Q9UDW1 63 aa6.51□□□□□ -1.37
PTPN3-201ENST00000262539 PSG8Q9UQ74 426 aa6.51□□□□□ -1.37
PTPN3-201ENST00000262539 USP9YO00507 2555 aaPredicted RBP6.51□□□□□ -1.37
PTPN3-201ENST00000262539 A0A096LPF7 62 aa6.51□□□□□ -1.37
PTPN3-201ENST00000262539 TRAV13-1A0A0B4J241 112 aa6.51□□□□□ -1.37
PTPN3-201ENST00000262539 I3L2K1 104 aa6.51□□□□□ -1.37
PTPN3-201ENST00000262539 MRPL27Q9P0M9 148 aaKnown RBP6.51□□□□□ -1.37
PTPN3-201ENST00000262539 RBAKDNA6NC62 111 aa6.51□□□□□ -1.37
PTPN3-201ENST00000262539 M0R2P5 195 aa6.51□□□□□ -1.37
PTPN3-201ENST00000262539 IGKV1-17P01599 117 aa6.51□□□□□ -1.37
PTPN3-201ENST00000262539 IGF1P05019 195 aa6.51□□□□□ -1.37
PTPN3-201ENST00000262539 UBE2BP63146 152 aa6.51□□□□□ -1.37
PTPN3-201ENST00000262539 OR10W1Q8NGF6 305 aa6.51□□□□□ -1.37
PTPN3-201ENST00000262539 AKAP6Q13023 2319 aa6.51□□□□□ -1.37
PTPN3-201ENST00000262539 TRBV19A0A075B6N1 114 aa6.5□□□□□ -1.37
PTPN3-201ENST00000262539 LINC00614P0C842 121 aa6.5□□□□□ -1.37
PTPN3-201ENST00000262539 MS4A6AQ9H2W1 248 aa6.5□□□□□ -1.37
PTPN3-201ENST00000262539 ABCA1O95477 2261 aa6.5□□□□□ -1.37
PTPN3-201ENST00000262539 K7EMT4 169 aa6.5□□□□□ -1.37
PTPN3-201ENST00000262539 PYYP10082 97 aa6.5□□□□□ -1.37
PTPN3-201ENST00000262539 PLNP26678 52 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms