RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 PSG3Q16557 428 aa13.19□□□□□ -0.3
SRSF1-201ENST00000258962 FAM231DQ6ZW35 169 aa13.19□□□□□ -0.3
SRSF1-201ENST00000258962 NOTCH3Q9UM47 2321 aa13.19□□□□□ -0.3
SRSF1-201ENST00000258962 IGKV2-40A0A087WW87 121 aaPredicted RBP13.18□□□□□ -0.3
SRSF1-201ENST00000258962 A0A1W2PPQ1 181 aa13.18□□□□□ -0.3
SRSF1-201ENST00000258962 ZNF705FA8MVS1 300 aaPredicted RBP13.18□□□□□ -0.3
SRSF1-201ENST00000258962 SOCS3O14543 225 aa13.18□□□□□ -0.3
SRSF1-201ENST00000258962 IGKV2D-40P01614 121 aaPredicted RBP13.18□□□□□ -0.3
SRSF1-201ENST00000258962 TYMSP04818 313 aa13.18□□□□□ -0.3
SRSF1-201ENST00000258962 CD33P20138 364 aa13.18□□□□□ -0.3
SRSF1-201ENST00000258962 SLURP1P55000 103 aa13.18□□□□□ -0.3
SRSF1-201ENST00000258962 KLF5Q13887 457 aaPredicted RBP13.18□□□□□ -0.3
SRSF1-201ENST00000258962 IBA57Q5T440 356 aaKnown RBP13.18□□□□□ -0.3
SRSF1-201ENST00000258962 LCN12Q6JVE5 192 aa13.18□□□□□ -0.3
SRSF1-201ENST00000258962 PRNTQ86SH4 94 aa13.18□□□□□ -0.3
SRSF1-201ENST00000258962 RNASE7Q9H1E1 156 aaKnown RBP13.18□□□□□ -0.3
SRSF1-201ENST00000258962 PSG8Q9UQ74 426 aa13.18□□□□□ -0.3
SRSF1-201ENST00000258962 SELENOKQ9Y6D0 94 aa13.18□□□□□ -0.3
SRSF1-201ENST00000258962 LINC01619G3V211 115 aa13.18□□□□□ -0.3
SRSF1-201ENST00000258962 DUX3Q96PT4 197 aa13.18□□□□□ -0.3
SRSF1-201ENST00000258962 CLEC5AQ9NY25 188 aa13.18□□□□□ -0.3
SRSF1-201ENST00000258962 V9GYV3 84 aa13.18□□□□□ -0.3
SRSF1-201ENST00000258962 PRAC2D3DTV9 90 aa13.17□□□□□ -0.3
SRSF1-201ENST00000258962 COX19Q49B96 90 aa13.17□□□□□ -0.3
SRSF1-201ENST00000258962 OR11H1Q8NG94 326 aa13.17□□□□□ -0.3
SRSF1-201ENST00000258962 OR1N2Q8NGR9 330 aa13.17□□□□□ -0.3
SRSF1-201ENST00000258962 ASCL2Q99929 193 aa13.17□□□□□ -0.3
SRSF1-201ENST00000258962 ZFP30Q9Y2G7 519 aa13.17□□□□□ -0.3
SRSF1-201ENST00000258962 CCL24O00175 119 aa13.16□□□□□ -0.3
SRSF1-201ENST00000258962 TCF24Q7RTU0 167 aa13.16□□□□□ -0.3
SRSF1-201ENST00000258962 TMEM183AQ8IXX5 376 aa13.16□□□□□ -0.3
SRSF1-201ENST00000258962 ZFP82Q8N141 532 aa13.16□□□□□ -0.3
SRSF1-201ENST00000258962 WFDC9Q8NEX5 89 aa13.16□□□□□ -0.3
SRSF1-201ENST00000258962 MRPL53Q96EL3 112 aaKnown RBP13.16□□□□□ -0.3
SRSF1-201ENST00000258962 C2orf70A6NJV1 201 aa13.15□□□□□ -0.3
SRSF1-201ENST00000258962 GATCO43716 136 aaKnown RBP13.15□□□□□ -0.3
SRSF1-201ENST00000258962 DAZAP1Q96EP5 407 aaKnown RBP13.15□□□□□ -0.3
SRSF1-201ENST00000258962 RAX2Q96IS3 184 aa13.15□□□□□ -0.3
SRSF1-201ENST00000258962 C16orf92Q96LL3 132 aa13.15□□□□□ -0.3
SRSF1-201ENST00000258962 C20orf173Q96LM9 149 aa13.15□□□□□ -0.3
SRSF1-201ENST00000258962 VGLL1Q99990 258 aa13.15□□□□□ -0.3
SRSF1-201ENST00000258962 NRN1Q9NPD7 142 aa13.15□□□□□ -0.3
SRSF1-201ENST00000258962 PRR27Q6MZM9 219 aa13.14□□□□□ -0.31
SRSF1-201ENST00000258962 ADAMTSL5Q6ZMM2 481 aa13.14□□□□□ -0.31
SRSF1-201ENST00000258962 LINC00322Q6ZN03 302 aaPredicted RBP13.14□□□□□ -0.31
SRSF1-201ENST00000258962 DPF1Q92782 380 aa13.14□□□□□ -0.31
SRSF1-201ENST00000258962 ZNF492Q9P255 531 aa13.14□□□□□ -0.31
SRSF1-201ENST00000258962 ZNF705GA8MUZ8 300 aaPredicted RBP13.13□□□□□ -0.31
SRSF1-201ENST00000258962 CBLN1P23435 193 aa13.13□□□□□ -0.31
SRSF1-201ENST00000258962 BMI1P35226 326 aa13.13□□□□□ -0.31
SRSF1-201ENST00000258962 RPL11P62913 178 aaKnown RBP13.13□□□□□ -0.31
SRSF1-201ENST00000258962 LINC00482Q8N8I6 264 aa13.13□□□□□ -0.31
SRSF1-201ENST00000258962 NUDT10Q8NFP7 164 aa13.13□□□□□ -0.31
SRSF1-201ENST00000258962 NUDT11Q96G61 164 aa13.13□□□□□ -0.31
SRSF1-201ENST00000258962 IGKV3-7A0A075B6H7 116 aa13.13□□□□□ -0.31
SRSF1-201ENST00000258962 C19orf71A6NCJ1 209 aa13.13□□□□□ -0.31
SRSF1-201ENST00000258962 TRGC2P03986 189 aa13.13□□□□□ -0.31
SRSF1-201ENST00000258962 DLX4Q92988 240 aaPredicted RBP13.13□□□□□ -0.31
SRSF1-201ENST00000258962 ZC2HC1AQ96GY0 325 aa13.13□□□□□ -0.31
SRSF1-201ENST00000258962 C8orf49Q96NF6 230 aa13.13□□□□□ -0.31
SRSF1-201ENST00000258962 RBAKDNA6NC62 111 aa13.12□□□□□ -0.31
SRSF1-201ENST00000258962 G3V4G9 280 aa13.12□□□□□ -0.31
SRSF1-201ENST00000258962 IGLL1P15814 213 aa13.12□□□□□ -0.31
SRSF1-201ENST00000258962 ERCC8Q13216 396 aa13.12□□□□□ -0.31
SRSF1-201ENST00000258962 FHL3Q13643 280 aa13.12□□□□□ -0.31
SRSF1-201ENST00000258962 OXLD1Q5BKU9 147 aa13.12□□□□□ -0.31
SRSF1-201ENST00000258962 Q8TAT8 98 aa13.12□□□□□ -0.31
SRSF1-201ENST00000258962 SAV1Q9H4B6 383 aaPredicted RBP13.12□□□□□ -0.31
SRSF1-201ENST00000258962 NOTCH1P46531 2555 aa13.11□□□□□ -0.31
SRSF1-201ENST00000258962 CT83Q5H943 113 aa13.11□□□□□ -0.31
SRSF1-201ENST00000258962 SAPCD1Q5SSQ6 148 aa13.11□□□□□ -0.31
SRSF1-201ENST00000258962 OR4B1Q8NGF8 309 aa13.11□□□□□ -0.31
SRSF1-201ENST00000258962 OR9G4Q8NGQ1 327 aa13.11□□□□□ -0.31
SRSF1-201ENST00000258962 DCANP1Q8TF63 244 aa13.11□□□□□ -0.31
SRSF1-201ENST00000258962 MCRIP2Q9BUT9 160 aaKnown RBP13.11□□□□□ -0.31
SRSF1-201ENST00000258962 SMIM27A0A1W2PRY6 76 aa13.1□□□□□ -0.31
SRSF1-201ENST00000258962 C5orf52A6NGY3 159 aa13.1□□□□□ -0.31
SRSF1-201ENST00000258962 CA1P00915 261 aaPredicted RBP13.1□□□□□ -0.31
SRSF1-201ENST00000258962 DEFA6Q01524 100 aa13.1□□□□□ -0.31
SRSF1-201ENST00000258962 SAMD5Q5TGI4 173 aa13.1□□□□□ -0.31
SRSF1-201ENST00000258962 WDR73Q6P4I2 378 aa13.1□□□□□ -0.31
SRSF1-201ENST00000258962 COX8CQ7Z4L0 72 aa13.1□□□□□ -0.31
SRSF1-201ENST00000258962 GBGT1Q8N5D6 347 aa13.1□□□□□ -0.31
SRSF1-201ENST00000258962 ZNF738Q8NE65 137 aa13.1□□□□□ -0.31
SRSF1-201ENST00000258962 PRR25Q96S07 402 aa13.1□□□□□ -0.31
SRSF1-201ENST00000258962 GPR61Q9BZJ8 451 aa13.1□□□□□ -0.31
SRSF1-201ENST00000258962 A8MWL6 223 aa13.09□□□□□ -0.31
SRSF1-201ENST00000258962 P01737 135 aa13.09□□□□□ -0.31
SRSF1-201ENST00000258962 CRIP1P50238 77 aa13.09□□□□□ -0.31
SRSF1-201ENST00000258962 SNRPEP62304 92 aaKnown RBP13.09□□□□□ -0.31
SRSF1-201ENST00000258962 MS4A6AQ9H2W1 248 aa13.09□□□□□ -0.31
SRSF1-201ENST00000258962 MT-ND6P03923 174 aa13.08□□□□□ -0.31
SRSF1-201ENST00000258962 CSN3P07498 182 aa13.08□□□□□ -0.31
SRSF1-201ENST00000258962 CT45A10P0DMU9 189 aa13.08□□□□□ -0.31
SRSF1-201ENST00000258962 AGPAT4-IT1Q9H0P7 198 aa13.08□□□□□ -0.31
SRSF1-201ENST00000258962 PEMTQ9UBM1 199 aa13.08□□□□□ -0.31
SRSF1-201ENST00000258962 TRAPPC1Q9Y5R8 145 aa13.08□□□□□ -0.31
SRSF1-201ENST00000258962 FAM231BA6NCW3 169 aa13.08□□□□□ -0.32
SRSF1-201ENST00000258962 IZUMO1RA6ND01 250 aa13.08□□□□□ -0.32
SRSF1-201ENST00000258962 NPIPB6E9PJ23 425 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms