RNA–Protein interactions for RNA: ENST00000253048.9

ZC3H4-201, Transcript of zinc finger CCCH-type containing 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ZC3H4, Length 6,119 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4-201ENST00000253048 IGHV3-30P01768 117 aa11.42□□□□□ -0.58
ZC3H4-201ENST00000253048 IGHV3-33P01772 117 aa11.42□□□□□ -0.58
ZC3H4-201ENST00000253048 IGHV3-30-3P0DP02 117 aa11.42□□□□□ -0.58
ZC3H4-201ENST00000253048 IGHV3-30-5P0DP03 117 aa11.42□□□□□ -0.58
ZC3H4-201ENST00000253048 LINC00205P59089 165 aa11.42□□□□□ -0.58
ZC3H4-201ENST00000253048 SHISA2Q6UWI4 295 aa11.42□□□□□ -0.58
ZC3H4-201ENST00000253048 A0A1B0GW64 132 aa11.42□□□□□ -0.58
ZC3H4-201ENST00000253048 A8MXK9 166 aa11.42□□□□□ -0.58
ZC3H4-201ENST00000253048 C16orf74Q96GX8 76 aa11.42□□□□□ -0.58
ZC3H4-201ENST00000253048 SCRT2Q9NQ03 307 aa11.42□□□□□ -0.58
ZC3H4-201ENST00000253048 C5orf63A6NC05 138 aa11.42□□□□□ -0.58
ZC3H4-201ENST00000253048 APRG1Q8IVJ8 170 aa11.42□□□□□ -0.58
ZC3H4-201ENST00000253048 LINC00311Q8N616 119 aa11.42□□□□□ -0.58
ZC3H4-201ENST00000253048 FANCD2OSQ96PS1 177 aa11.42□□□□□ -0.58
ZC3H4-201ENST00000253048 Q6ZWC4 215 aa11.41□□□□□ -0.58
ZC3H4-201ENST00000253048 WIPF2Q8TF74 440 aaPredicted RBP11.41□□□□□ -0.58
ZC3H4-201ENST00000253048 TMEM242Q9NWH2 141 aa11.41□□□□□ -0.58
ZC3H4-201ENST00000253048 DOCK4Q8N1I0 1966 aa11.41□□□□□ -0.58
ZC3H4-201ENST00000253048 ADMP35318 185 aa11.41□□□□□ -0.58
ZC3H4-201ENST00000253048 ARTNQ5T4W7 220 aa11.41□□□□□ -0.58
ZC3H4-201ENST00000253048 HSD52Q0P140 79 aa11.41□□□□□ -0.58
ZC3H4-201ENST00000253048 ZNF134P52741 427 aa11.4□□□□□ -0.58
ZC3H4-201ENST00000253048 KIAA1671Q9BY89 1806 aa11.4□□□□□ -0.58
ZC3H4-201ENST00000253048 KLHDC3Q9BQ90 382 aa11.4□□□□□ -0.58
ZC3H4-201ENST00000253048 NCOR1P1Q9H4R4 102 aa11.4□□□□□ -0.58
ZC3H4-201ENST00000253048 NDUFB1O75438 58 aa11.4□□□□□ -0.58
ZC3H4-201ENST00000253048 ZNF843Q8N446 348 aa11.4□□□□□ -0.58
ZC3H4-201ENST00000253048 C17orf58Q2M2W7 97 aa11.39□□□□□ -0.59
ZC3H4-201ENST00000253048 DMRT1Q9Y5R6 373 aa11.39□□□□□ -0.59
ZC3H4-201ENST00000253048 VSIRQ9H7M9 311 aa11.39□□□□□ -0.59
ZC3H4-201ENST00000253048 MRPL52Q86TS9 123 aaKnown RBP11.39□□□□□ -0.59
ZC3H4-201ENST00000253048 CENPVL3A0A0U1RRI6 287 aa11.39□□□□□ -0.59
ZC3H4-201ENST00000253048 NTF4P34130 210 aa11.39□□□□□ -0.59
ZC3H4-201ENST00000253048 MLANAQ16655 118 aa11.39□□□□□ -0.59
ZC3H4-201ENST00000253048 MPV17L2Q567V2 206 aa11.39□□□□□ -0.59
ZC3H4-201ENST00000253048 KAAG1Q9UBP8 84 aa11.39□□□□□ -0.59
ZC3H4-201ENST00000253048 U3KQE9 123 aa11.39□□□□□ -0.59
ZC3H4-201ENST00000253048 BTCP35070 178 aa11.39□□□□□ -0.59
ZC3H4-201ENST00000253048 INSL3P51460 131 aa11.39□□□□□ -0.59
ZC3H4-201ENST00000253048 IGFL2Q6UWQ7 119 aa11.39□□□□□ -0.59
ZC3H4-201ENST00000253048 Q86TA4 180 aa11.39□□□□□ -0.59
ZC3H4-201ENST00000253048 TMEM75Q8N9X5 138 aa11.39□□□□□ -0.59
ZC3H4-201ENST00000253048 C9orf153Q5TBE3 101 aa11.38□□□□□ -0.59
ZC3H4-201ENST00000253048 WDR81Q562E7 1941 aa11.38□□□□□ -0.59
ZC3H4-201ENST00000253048 GNB1LQ9BYB4 327 aa11.38□□□□□ -0.59
ZC3H4-201ENST00000253048 PROK2Q9HC23 129 aa11.38□□□□□ -0.59
ZC3H4-201ENST00000253048 TIMM17AQ99595 171 aa11.38□□□□□ -0.59
ZC3H4-201ENST00000253048 BUB3O43684 328 aa11.38□□□□□ -0.59
ZC3H4-201ENST00000253048 HLA-DRB4P13762 266 aa11.38□□□□□ -0.59
ZC3H4-201ENST00000253048 HLA-DRB4X5D2U9 266 aa11.38□□□□□ -0.59
ZC3H4-201ENST00000253048 FNDC10F2Z333 226 aa11.38□□□□□ -0.59
ZC3H4-201ENST00000253048 LAMTOR2Q9Y2Q5 125 aa11.38□□□□□ -0.59
ZC3H4-201ENST00000253048 EP300Q09472 2414 aaPredicted RBP11.38□□□□□ -0.59
ZC3H4-201ENST00000253048 CACNA1EQ15878 2313 aa11.37□□□□□ -0.59
ZC3H4-201ENST00000253048 DNAJC9-AS1A6NH13 148 aa11.37□□□□□ -0.59
ZC3H4-201ENST00000253048 SDK2Q58EX2 2172 aa11.37□□□□□ -0.59
ZC3H4-201ENST00000253048 GYPEP15421 78 aa11.37□□□□□ -0.59
ZC3H4-201ENST00000253048 UBE2AP49459 152 aa11.37□□□□□ -0.59
ZC3H4-201ENST00000253048 C5orf24Q7Z6I8 188 aa11.37□□□□□ -0.59
ZC3H4-201ENST00000253048 NDUFA4L2Q9NRX3 87 aa11.37□□□□□ -0.59
ZC3H4-201ENST00000253048 XCL1P47992 114 aa11.37□□□□□ -0.59
ZC3H4-201ENST00000253048 MRPL53Q96EL3 112 aaKnown RBP11.37□□□□□ -0.59
ZC3H4-201ENST00000253048 TP53TG1Q9Y2A0 90 aa11.37□□□□□ -0.59
ZC3H4-201ENST00000253048 RTTNQ86VV8 2226 aa11.37□□□□□ -0.59
ZC3H4-201ENST00000253048 DEFB105AQ8NG35 78 aa11.36□□□□□ -0.59
ZC3H4-201ENST00000253048 AGMATQ9BSE5 352 aa11.36□□□□□ -0.59
ZC3H4-201ENST00000253048 RALGAPA1Q6GYQ0 2036 aa11.36□□□□□ -0.59
ZC3H4-201ENST00000253048 DEFB135Q30KP9 77 aa11.36□□□□□ -0.59
ZC3H4-201ENST00000253048 NDUFA11Q86Y39 141 aa11.36□□□□□ -0.59
ZC3H4-201ENST00000253048 C8orf31Q8N9H6 132 aa11.36□□□□□ -0.59
ZC3H4-201ENST00000253048 RNF138Q8WVD3 245 aa11.36□□□□□ -0.59
ZC3H4-201ENST00000253048 TMEM141Q96I45 108 aa11.36□□□□□ -0.59
ZC3H4-201ENST00000253048 SERF1AO75920 110 aa11.36□□□□□ -0.59
ZC3H4-201ENST00000253048 LINC00518Q8N0U6 118 aa11.36□□□□□ -0.59
ZC3H4-201ENST00000253048 C4orf3Q8WVX3 66 aa11.36□□□□□ -0.59
ZC3H4-201ENST00000253048 SMKR1H3BMG3 65 aa11.36□□□□□ -0.59
ZC3H4-201ENST00000253048 HILS1P60008 231 aa11.35□□□□□ -0.59
ZC3H4-201ENST00000253048 CAMK2N2Q96S95 79 aa11.35□□□□□ -0.59
ZC3H4-201ENST00000253048 SNRNP200O75643 2136 aaKnown RBP11.35□□□□□ -0.59
ZC3H4-201ENST00000253048 C11orf45Q8TAV5 145 aa11.35□□□□□ -0.59
ZC3H4-201ENST00000253048 TRAV12-1A0A0B4J245 112 aa11.34□□□□□ -0.59
ZC3H4-201ENST00000253048 PRR31Q5SQ13 230 aa11.34□□□□□ -0.59
ZC3H4-201ENST00000253048 PYGO2Q9BRQ0 406 aa11.34□□□□□ -0.59
ZC3H4-201ENST00000253048 TMEM14EPQ6UXP3 125 aa11.34□□□□□ -0.59
ZC3H4-201ENST00000253048 ABCA4P78363 2273 aa11.34□□□□□ -0.59
ZC3H4-201ENST00000253048 A0A087WWC5 75 aa11.34□□□□□ -0.59
ZC3H4-201ENST00000253048 ETDCA0A1B0GVM5 59 aa11.34□□□□□ -0.59
ZC3H4-201ENST00000253048 IGHG4P01861 327 aa11.34□□□□□ -0.59
ZC3H4-201ENST00000253048 WFDC1Q9HC57 220 aa11.34□□□□□ -0.59
ZC3H4-201ENST00000253048 ESM1Q9NQ30 184 aa11.34□□□□□ -0.59
ZC3H4-201ENST00000253048 MGAMO43451 1857 aa11.34□□□□□ -0.59
ZC3H4-201ENST00000253048 C15orf62A8K5M9 175 aa11.33□□□□□ -0.59
ZC3H4-201ENST00000253048 J3QRE1 110 aa11.33□□□□□ -0.59
ZC3H4-201ENST00000253048 SPRY2O43597 315 aa11.33□□□□□ -0.59
ZC3H4-201ENST00000253048 LOXL1Q08397 574 aaPredicted RBP11.33□□□□□ -0.59
ZC3H4-201ENST00000253048 NEGR1Q7Z3B1 354 aa11.33□□□□□ -0.59
ZC3H4-201ENST00000253048 ESPL1Q14674 2120 aa11.33□□□□□ -0.6
ZC3H4-201ENST00000253048 H3BRN7 92 aa11.33□□□□□ -0.6
ZC3H4-201ENST00000253048 SIGLEC8Q9NYZ4 499 aa11.33□□□□□ -0.6
ZC3H4-201ENST00000253048 RNF126Q9BV68 326 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms