RNA–Protein interactions for RNA: ENST00000249923.7

COPB1-201, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-201ENST00000249923 NDUFA3O95167 84 aa7.92□□□□□ -1.14
COPB1-201ENST00000249923 ADORA2A-AS1P86434 159 aa7.92□□□□□ -1.14
COPB1-201ENST00000249923 RIGQ13278 110 aa7.92□□□□□ -1.14
COPB1-201ENST00000249923 ANKRD39Q53RE8 183 aa7.92□□□□□ -1.14
COPB1-201ENST00000249923 FAM162BQ5T6X4 162 aa7.92□□□□□ -1.14
COPB1-201ENST00000249923 OR11H6Q8NGC7 330 aa7.92□□□□□ -1.14
COPB1-201ENST00000249923 C8orf49Q96NF6 230 aa7.92□□□□□ -1.14
COPB1-201ENST00000249923 GFRA4Q9GZZ7 299 aa7.92□□□□□ -1.14
COPB1-201ENST00000249923 IL4P05112 153 aa7.91□□□□□ -1.14
COPB1-201ENST00000249923 LOXL1Q08397 574 aaPredicted RBP7.91□□□□□ -1.14
COPB1-201ENST00000249923 FER1L6-AS1Q8NA97 138 aa7.91□□□□□ -1.14
COPB1-201ENST00000249923 PRELID3AQ96N28 172 aa7.91□□□□□ -1.14
COPB1-201ENST00000249923 WI2-2373I1.2A0A1W2PRP0 233 aa7.91□□□□□ -1.14
COPB1-201ENST00000249923 NPIPB5A8MRT5 1133 aa7.91□□□□□ -1.14
COPB1-201ENST00000249923 HIST1H1AQ02539 215 aaPredicted RBP7.91□□□□□ -1.14
COPB1-201ENST00000249923 CLEC2AQ6UVW9 174 aa7.91□□□□□ -1.14
COPB1-201ENST00000249923 AMTNQ6UX39 209 aa7.91□□□□□ -1.14
COPB1-201ENST00000249923 SPOCK3Q9BQ16 436 aa7.91□□□□□ -1.14
COPB1-201ENST00000249923 CFAP46Q8IYW2 2715 aa7.91□□□□□ -1.14
COPB1-201ENST00000249923 NACAE9PAV3 2078 aa7.91□□□□□ -1.14
COPB1-201ENST00000249923 VSTM5A8MXK1 200 aa7.91□□□□□ -1.14
COPB1-201ENST00000249923 NBR2O15453 112 aa7.91□□□□□ -1.14
COPB1-201ENST00000249923 GTSCR1Q86UQ5 136 aa7.91□□□□□ -1.14
COPB1-201ENST00000249923 TMEM75Q8N9X5 138 aa7.91□□□□□ -1.14
COPB1-201ENST00000249923 NPBQ8NG41 125 aa7.91□□□□□ -1.14
COPB1-201ENST00000249923 RNF125Q96EQ8 232 aa7.91□□□□□ -1.14
COPB1-201ENST00000249923 C1RLQ9NZP8 487 aa7.91□□□□□ -1.14
COPB1-201ENST00000249923 IGLV11-55A0A075B6I3 123 aa7.9□□□□□ -1.14
COPB1-201ENST00000249923 TMEM238C9JI98 176 aa7.9□□□□□ -1.14
COPB1-201ENST00000249923 HAX1O00165 279 aa7.9□□□□□ -1.14
COPB1-201ENST00000249923 IGHG4P01861 327 aa7.9□□□□□ -1.14
COPB1-201ENST00000249923 FBXL19-AS1Q494R0 122 aa7.9□□□□□ -1.14
COPB1-201ENST00000249923 C11orf71Q6IPW1 123 aa7.9□□□□□ -1.14
COPB1-201ENST00000249923 PTPN13Q12923 2485 aa7.9□□□□□ -1.14
COPB1-201ENST00000249923 HIVEP3Q5T1R4 2406 aa7.9□□□□□ -1.14
COPB1-201ENST00000249923 SPRY2O43597 315 aa7.9□□□□□ -1.14
COPB1-201ENST00000249923 EGR2P11161 476 aaPredicted RBP7.9□□□□□ -1.15
COPB1-201ENST00000249923 ZFP36P26651 326 aaKnown RBP7.9□□□□□ -1.15
COPB1-201ENST00000249923 PSG3Q16557 428 aa7.9□□□□□ -1.15
COPB1-201ENST00000249923 LOC107984156A0A0G2JMH3 177 aa7.89□□□□□ -1.15
COPB1-201ENST00000249923 TRBV6-1A0A0K0K1D8 114 aa7.89□□□□□ -1.15
COPB1-201ENST00000249923 TMEM189A5PLL7 270 aa7.89□□□□□ -1.15
COPB1-201ENST00000249923 SAMD13Q5VXD3 122 aa7.89□□□□□ -1.15
COPB1-201ENST00000249923 ARL17AQ8IVW1 177 aa7.89□□□□□ -1.15
COPB1-201ENST00000249923 RNF5Q99942 180 aa7.89□□□□□ -1.15
COPB1-201ENST00000249923 NDFIP1Q9BT67 221 aa7.89□□□□□ -1.15
COPB1-201ENST00000249923 SONP18583 2426 aaKnown RBP7.89□□□□□ -1.15
COPB1-201ENST00000249923 IGKV2-40A0A087WW87 121 aaPredicted RBP7.89□□□□□ -1.15
COPB1-201ENST00000249923 A0A096LNJ9 63 aa7.89□□□□□ -1.15
COPB1-201ENST00000249923 CCL21O00585 134 aa7.89□□□□□ -1.15
COPB1-201ENST00000249923 IGKV2D-40P01614 121 aaPredicted RBP7.89□□□□□ -1.15
COPB1-201ENST00000249923 RPL11P62913 178 aaKnown RBP7.89□□□□□ -1.15
COPB1-201ENST00000249923 DEFB125Q8N687 156 aa7.89□□□□□ -1.15
COPB1-201ENST00000249923 NEU4Q8WWR8 484 aaPredicted RBP7.89□□□□□ -1.15
COPB1-201ENST00000249923 AJUBAQ96IF1 538 aa7.89□□□□□ -1.15
COPB1-201ENST00000249923 CSTL1Q9H114 145 aa7.89□□□□□ -1.15
COPB1-201ENST00000249923 AAMDCQ9H7C9 122 aa7.89□□□□□ -1.15
COPB1-201ENST00000249923 DPM3Q9P2X0 92 aa7.89□□□□□ -1.15
COPB1-201ENST00000249923 PSG8Q9UQ74 426 aa7.89□□□□□ -1.15
COPB1-201ENST00000249923 H3BVH4 76 aa7.88□□□□□ -1.15
COPB1-201ENST00000249923 NDUFS7O75251 213 aa7.88□□□□□ -1.15
COPB1-201ENST00000249923 C5orf64Q2M2E5 130 aa7.88□□□□□ -1.15
COPB1-201ENST00000249923 LYZL1Q6UWQ5 148 aa7.88□□□□□ -1.15
COPB1-201ENST00000249923 PIP4P2Q8N4L2 257 aa7.88□□□□□ -1.15
COPB1-201ENST00000249923 Q8N6K4 173 aa7.88□□□□□ -1.15
COPB1-201ENST00000249923 FOXC2Q99958 501 aa7.88□□□□□ -1.15
COPB1-201ENST00000249923 DKK2Q9UBU2 259 aa7.88□□□□□ -1.15
COPB1-201ENST00000249923 SMAD5-AS1Q9Y6J3 95 aa7.88□□□□□ -1.15
COPB1-201ENST00000249923 WNK1Q9H4A3 2382 aa7.88□□□□□ -1.15
COPB1-201ENST00000249923 H7C2G1 150 aa7.88□□□□□ -1.15
COPB1-201ENST00000249923 CD5LO43866 347 aa7.88□□□□□ -1.15
COPB1-201ENST00000249923 SOX21Q9Y651 276 aaPredicted RBP7.88□□□□□ -1.15
COPB1-201ENST00000249923 ABCA2Q9BZC7 2435 aa7.88□□□□□ -1.15
COPB1-201ENST00000249923 HLA-DMBP28068 263 aa7.88□□□□□ -1.15
COPB1-201ENST00000249923 RHOGP84095 191 aa7.88□□□□□ -1.15
COPB1-201ENST00000249923 SRSF8Q9BRL6 282 aaKnown RBP7.88□□□□□ -1.15
COPB1-201ENST00000249923 ETDBQ3ZM63 59 aa7.87□□□□□ -1.15
COPB1-201ENST00000249923 GATD1Q8NB37 220 aa7.87□□□□□ -1.15
COPB1-201ENST00000249923 ZNF418Q8TF45 676 aaPredicted RBP7.87□□□□□ -1.15
COPB1-201ENST00000249923 ZNF80P51504 273 aaPredicted RBP7.87□□□□□ -1.15
COPB1-201ENST00000249923 SAMD5Q5TGI4 173 aa7.87□□□□□ -1.15
COPB1-201ENST00000249923 PET117Q6UWS5 81 aa7.87□□□□□ -1.15
COPB1-201ENST00000249923 SH2D6Q7Z4S9 175 aa7.87□□□□□ -1.15
COPB1-201ENST00000249923 CHCHD1Q96BP2 118 aaKnown RBP7.87□□□□□ -1.15
COPB1-201ENST00000249923 HIST1H4GQ99525 98 aa7.87□□□□□ -1.15
COPB1-201ENST00000249923 IFI27L1Q96BM0 104 aa7.87□□□□□ -1.15
COPB1-201ENST00000249923 FLNCQ14315 2725 aa7.87□□□□□ -1.15
COPB1-201ENST00000249923 TEX48A0A1B0GUV7 120 aa7.86□□□□□ -1.15
COPB1-201ENST00000249923 CTSGP08311 255 aa7.86□□□□□ -1.15
COPB1-201ENST00000249923 SMIM13P0DJ93 91 aa7.86□□□□□ -1.15
COPB1-201ENST00000249923 PRTN3P24158 256 aa7.86□□□□□ -1.15
COPB1-201ENST00000249923 VMO1Q7Z5L0 202 aa7.86□□□□□ -1.15
COPB1-201ENST00000249923 GATA1P15976 413 aaPredicted RBP7.86□□□□□ -1.15
COPB1-201ENST00000249923 LEPP41159 167 aa7.86□□□□□ -1.15
COPB1-201ENST00000249923 ZNF562Q6V9R5 426 aa7.86□□□□□ -1.15
COPB1-201ENST00000249923 SCGB1D4Q6XE38 83 aa7.86□□□□□ -1.15
COPB1-201ENST00000249923 ZNF502Q8TBZ5 544 aa7.86□□□□□ -1.15
COPB1-201ENST00000249923 ARPC1AQ92747 370 aa7.86□□□□□ -1.15
COPB1-201ENST00000249923 MSRB1Q9NZV6 116 aa7.86□□□□□ -1.15
COPB1-201ENST00000249923 MSRB2Q9Y3D2 182 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms