RNA–Protein interactions for RNA: ENST00000248594.10

PTPN12-201, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN12, Length 3,406 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-201ENST00000248594 VKORC1Q9BQB6 163 aa14.47□□□□□ -0.09
PTPN12-201ENST00000248594 SRSF6Q13247 344 aaKnown RBP14.47□□□□□ -0.09
PTPN12-201ENST00000248594 A0A1W2PPI3 338 aa14.47□□□□□ -0.09
PTPN12-201ENST00000248594 CECR9P0C854 216 aa14.47□□□□□ -0.09
PTPN12-201ENST00000248594 SMCPP49901 116 aaPredicted RBP14.47□□□□□ -0.09
PTPN12-201ENST00000248594 IL11RAQ14626 422 aa14.47□□□□□ -0.09
PTPN12-201ENST00000248594 OTORQ9NRC9 128 aa14.47□□□□□ -0.09
PTPN12-201ENST00000248594 PRO0461Q9UI25 63 aa14.47□□□□□ -0.09
PTPN12-201ENST00000248594 ZNF785A8K8V0 405 aa14.46□□□□□ -0.09
PTPN12-201ENST00000248594 MEOX1P50221 254 aa14.46□□□□□ -0.09
PTPN12-201ENST00000248594 TRAV26-2A0A0B4J265 109 aa14.46□□□□□ -0.1
PTPN12-201ENST00000248594 OR11H12B2RN74 326 aa14.46□□□□□ -0.1
PTPN12-201ENST00000248594 OR11H1Q8NG94 326 aa14.46□□□□□ -0.1
PTPN12-201ENST00000248594 OR11H2Q8NH07 326 aa14.46□□□□□ -0.1
PTPN12-201ENST00000248594 FSTL3O95633 263 aa14.45□□□□□ -0.1
PTPN12-201ENST00000248594 CRYGCP07315 174 aa14.45□□□□□ -0.1
PTPN12-201ENST00000248594 MYOZ3Q8TDC0 251 aa14.45□□□□□ -0.1
PTPN12-201ENST00000248594 RITA1Q96K30 269 aa14.45□□□□□ -0.1
PTPN12-201ENST00000248594 COL6A6A6NMZ7 2263 aa14.45□□□□□ -0.1
PTPN12-201ENST00000248594 IGHV3-35A0A0C4DH35 117 aa14.45□□□□□ -0.1
PTPN12-201ENST00000248594 SH2D1AO60880 128 aa14.45□□□□□ -0.1
PTPN12-201ENST00000248594 IGLV2-11P01706 119 aa14.45□□□□□ -0.1
PTPN12-201ENST00000248594 SLC25A39Q9BZJ4 359 aaPredicted RBP14.45□□□□□ -0.1
PTPN12-201ENST00000248594 EMP1P54849 157 aa14.44□□□□□ -0.1
PTPN12-201ENST00000248594 GAGE2BQ13066 116 aa14.44□□□□□ -0.1
PTPN12-201ENST00000248594 GAGE2EQ4V326 116 aa14.44□□□□□ -0.1
PTPN12-201ENST00000248594 C6orf15Q6UXA7 325 aaPredicted RBP14.44□□□□□ -0.1
PTPN12-201ENST00000248594 GAGE2DQ9UEU5 116 aa14.44□□□□□ -0.1
PTPN12-201ENST00000248594 Q6AWC8 147 aa14.44□□□□□ -0.1
PTPN12-201ENST00000248594 HIGD1BQ9P298 99 aa14.44□□□□□ -0.1
PTPN12-201ENST00000248594 SRRM5B3KS81 715 aa14.43□□□□□ -0.1
PTPN12-201ENST00000248594 RPL32P62910 135 aaKnown RBP14.43□□□□□ -0.1
PTPN12-201ENST00000248594 ZCCHC24Q8N2G6 241 aaKnown RBP14.43□□□□□ -0.1
PTPN12-201ENST00000248594 ANKRD11Q6UB99 2663 aaPredicted RBP14.43□□□□□ -0.1
PTPN12-201ENST00000248594 SNCGO76070 127 aa14.43□□□□□ -0.1
PTPN12-201ENST00000248594 PLGLAQ15195 96 aa14.43□□□□□ -0.1
PTPN12-201ENST00000248594 RASL11BQ9BPW5 248 aa14.43□□□□□ -0.1
PTPN12-201ENST00000248594 C8orf46Q8TAG6 207 aa14.42□□□□□ -0.1
PTPN12-201ENST00000248594 CARD19Q96LW7 228 aa14.42□□□□□ -0.1
PTPN12-201ENST00000248594 BEX4Q9NWD9 120 aaPredicted RBP14.42□□□□□ -0.1
PTPN12-201ENST00000248594 PROCRQ9UNN8 238 aa14.42□□□□□ -0.1
PTPN12-201ENST00000248594 TNFRSF6BO95407 300 aa14.42□□□□□ -0.1
PTPN12-201ENST00000248594 CGB1A6NKQ9 187 aa14.41□□□□□ -0.1
PTPN12-201ENST00000248594 CNTFRP26992 372 aa14.41□□□□□ -0.1
PTPN12-201ENST00000248594 ATP5J2P56134 94 aa14.41□□□□□ -0.1
PTPN12-201ENST00000248594 PPDPFLQ8WWR9 84 aa14.41□□□□□ -0.1
PTPN12-201ENST00000248594 SPRY2O43597 315 aa14.41□□□□□ -0.1
PTPN12-201ENST00000248594 ATRXP46100 2492 aa14.4□□□□□ -0.1
PTPN12-201ENST00000248594 CFAP126Q5VTH2 177 aa14.4□□□□□ -0.1
PTPN12-201ENST00000248594 CTSZQ9UBR2 303 aa14.4□□□□□ -0.1
PTPN12-201ENST00000248594 GAGE12JA6NER3 117 aa14.4□□□□□ -0.1
PTPN12-201ENST00000248594 A8MWV9 139 aa14.4□□□□□ -0.1
PTPN12-201ENST00000248594 M0R1B8 84 aa14.4□□□□□ -0.1
PTPN12-201ENST00000248594 GAGE7O76087 117 aa14.4□□□□□ -0.1
PTPN12-201ENST00000248594 GAGE12FP0CL80 117 aa14.4□□□□□ -0.1
PTPN12-201ENST00000248594 GAGE12GP0CL81 117 aa14.4□□□□□ -0.1
PTPN12-201ENST00000248594 GAGE12IP0CL82 117 aa14.4□□□□□ -0.1
PTPN12-201ENST00000248594 GAGE4Q13068 117 aa14.4□□□□□ -0.1
PTPN12-201ENST00000248594 MORN3Q6PF18 240 aaPredicted RBP14.4□□□□□ -0.1
PTPN12-201ENST00000248594 RAX2Q96IS3 184 aa14.4□□□□□ -0.1
PTPN12-201ENST00000248594 CCL11P51671 97 aa14.39□□□□□ -0.11
PTPN12-201ENST00000248594 MSMPQ1L6U9 139 aa14.39□□□□□ -0.11
PTPN12-201ENST00000248594 ANKRD29Q8N6D5 301 aa14.39□□□□□ -0.11
PTPN12-201ENST00000248594 KLHL30-AS1Q8NEE0 82 aa14.39□□□□□ -0.11
PTPN12-201ENST00000248594 AJUBAQ96IF1 538 aa14.39□□□□□ -0.11
PTPN12-201ENST00000248594 FBXL15Q9H469 300 aa14.39□□□□□ -0.11
PTPN12-201ENST00000248594 AAMDCQ9H7C9 122 aa14.39□□□□□ -0.11
PTPN12-201ENST00000248594 TRGV5A0A0B4J1U4 118 aa14.39□□□□□ -0.11
PTPN12-201ENST00000248594 ZNF815PA8K554 130 aa14.39□□□□□ -0.11
PTPN12-201ENST00000248594 EGR2P11161 476 aaPredicted RBP14.39□□□□□ -0.11
PTPN12-201ENST00000248594 NGBQ9NPG2 151 aa14.39□□□□□ -0.11
PTPN12-201ENST00000248594 TRAV4A0A0B4J268 109 aa14.38□□□□□ -0.11
PTPN12-201ENST00000248594 POU2AF1Q16633 256 aa14.38□□□□□ -0.11
PTPN12-201ENST00000248594 PMS2CLQ68D20 193 aa14.38□□□□□ -0.11
PTPN12-201ENST00000248594 FAM159AQ6UWV7 190 aa14.38□□□□□ -0.11
PTPN12-201ENST00000248594 OR4C13Q8NGP0 309 aa14.38□□□□□ -0.11
PTPN12-201ENST00000248594 ONECUT1Q9UBC0 465 aa14.38□□□□□ -0.11
PTPN12-201ENST00000248594 RAXQ9Y2V3 346 aa14.38□□□□□ -0.11
PTPN12-201ENST00000248594 ZNF688P0C7X2 276 aa14.38□□□□□ -0.11
PTPN12-201ENST00000248594 RPL27AP46776 148 aaKnown RBP14.38□□□□□ -0.11
PTPN12-201ENST00000248594 CCL8P80075 99 aa14.38□□□□□ -0.11
PTPN12-201ENST00000248594 VMA21Q3ZAQ7 101 aa14.38□□□□□ -0.11
PTPN12-201ENST00000248594 HLA-DMBP28068 263 aa14.37□□□□□ -0.11
PTPN12-201ENST00000248594 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.37□□□□□ -0.11
PTPN12-201ENST00000248594 ARRDC1-AS1Q9H2J1 176 aa14.37□□□□□ -0.11
PTPN12-201ENST00000248594 SPRR3Q9UBC9 169 aa14.37□□□□□ -0.11
PTPN12-201ENST00000248594 MALRD1Q5VYJ5 2156 aa14.37□□□□□ -0.11
PTPN12-201ENST00000248594 C9JAW5 83 aa14.37□□□□□ -0.11
PTPN12-201ENST00000248594 IGHV3-23P01764 117 aa14.37□□□□□ -0.11
PTPN12-201ENST00000248594 RPL7P18124 248 aaKnown RBP14.37□□□□□ -0.11
PTPN12-201ENST00000248594 B9A039 149 aa14.37□□□□□ -0.11
PTPN12-201ENST00000248594 THAP8Q8NA92 274 aa14.37□□□□□ -0.11
PTPN12-201ENST00000248594 IGFBPL1Q8WX77 278 aa14.37□□□□□ -0.11
PTPN12-201ENST00000248594 SCNM1Q9BWG6 230 aa14.37□□□□□ -0.11
PTPN12-201ENST00000248594 TLN1Q9Y490 2541 aaKnown RBP14.37□□□□□ -0.11
PTPN12-201ENST00000248594 CRLF1O75462 422 aa14.36□□□□□ -0.11
PTPN12-201ENST00000248594 RAB9BQ9NP90 201 aa14.36□□□□□ -0.11
PTPN12-201ENST00000248594 TNRC6BQ9UPQ9 1833 aaKnown RBP14.36□□□□□ -0.11
PTPN12-201ENST00000248594 OVOL3O00110 214 aa14.36□□□□□ -0.11
PTPN12-201ENST00000248594 ARHGAP32A7KAX9 2087 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms