RNA–Protein interactions for RNA: ENST00000248054.9

SIN3B-201, Transcript of SIN3 transcription regulator family member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIN3B, Length 5,037 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-201ENST00000248054 IGKV2D-40P01614 121 aaPredicted RBP12.56□□□□□ -0.4
SIN3B-201ENST00000248054 C11orf52Q96A22 123 aa12.56□□□□□ -0.4
SIN3B-201ENST00000248054 OTOGLQ3ZCN5 2332 aa12.56□□□□□ -0.4
SIN3B-201ENST00000248054 ITLN2Q8WWU7 325 aaPredicted RBP12.55□□□□□ -0.4
SIN3B-201ENST00000248054 H3BUA1 57 aa12.55□□□□□ -0.4
SIN3B-201ENST00000248054 PCNX1Q96RV3 2341 aa12.55□□□□□ -0.4
SIN3B-201ENST00000248054 TRAV8-2A0A0B4J237 113 aa12.55□□□□□ -0.4
SIN3B-201ENST00000248054 CRIP3Q6Q6R5 217 aa12.55□□□□□ -0.4
SIN3B-201ENST00000248054 DAZ1Q9NQZ3 744 aaKnown RBP12.55□□□□□ -0.4
SIN3B-201ENST00000248054 ADAMTSL5Q6ZMM2 481 aa12.55□□□□□ -0.4
SIN3B-201ENST00000248054 C9orf118A6NHY6 69 aa12.54□□□□□ -0.4
SIN3B-201ENST00000248054 VCYO14598 125 aa12.54□□□□□ -0.4
SIN3B-201ENST00000248054 HOXB4P17483 251 aaPredicted RBP12.54□□□□□ -0.4
SIN3B-201ENST00000248054 EVI2AP22794 236 aa12.54□□□□□ -0.4
SIN3B-201ENST00000248054 BCL6BQ8N143 479 aaPredicted RBP12.54□□□□□ -0.4
SIN3B-201ENST00000248054 DOCK10Q96BY6 2186 aa12.54□□□□□ -0.4
SIN3B-201ENST00000248054 DIAPH2-AS1Q14236 149 aa12.54□□□□□ -0.4
SIN3B-201ENST00000248054 RUSC1-AS1Q66K80 236 aa12.54□□□□□ -0.4
SIN3B-201ENST00000248054 MORN3Q6PF18 240 aaPredicted RBP12.54□□□□□ -0.4
SIN3B-201ENST00000248054 TPSG1Q9NRR2 321 aa12.54□□□□□ -0.4
SIN3B-201ENST00000248054 INS-IGF2F8WCM5 200 aa12.54□□□□□ -0.4
SIN3B-201ENST00000248054 K7EP34 96 aa12.54□□□□□ -0.4
SIN3B-201ENST00000248054 WISP2O76076 250 aa12.54□□□□□ -0.4
SIN3B-201ENST00000248054 FSTL3O95633 263 aa12.54□□□□□ -0.4
SIN3B-201ENST00000248054 CD28P10747 220 aa12.54□□□□□ -0.4
SIN3B-201ENST00000248054 PCNX3Q9H6A9 2034 aa12.54□□□□□ -0.4
SIN3B-201ENST00000248054 NBASA2RRP1 2371 aa12.54□□□□□ -0.4
SIN3B-201ENST00000248054 TAX1BP3O14907 124 aa12.54□□□□□ -0.4
SIN3B-201ENST00000248054 SLAQ13239 276 aa12.54□□□□□ -0.4
SIN3B-201ENST00000248054 ZNF48Q96MX3 618 aaPredicted RBP12.54□□□□□ -0.4
SIN3B-201ENST00000248054 ERG28Q9UKR5 140 aa12.54□□□□□ -0.4
SIN3B-201ENST00000248054 LSM4Q9Y4Z0 139 aaKnown RBP12.54□□□□□ -0.4
SIN3B-201ENST00000248054 V9GYV3 84 aa12.54□□□□□ -0.4
SIN3B-201ENST00000248054 ZC2HC1AQ96GY0 325 aa12.53□□□□□ -0.4
SIN3B-201ENST00000248054 LINC00574Q9H8X3 128 aa12.53□□□□□ -0.4
SIN3B-201ENST00000248054 NPBQ8NG41 125 aa12.53□□□□□ -0.4
SIN3B-201ENST00000248054 TRBV7-9A0A0J9YWB2 115 aa12.53□□□□□ -0.4
SIN3B-201ENST00000248054 RNF223E7ERA6 249 aa12.53□□□□□ -0.4
SIN3B-201ENST00000248054 MSMPQ1L6U9 139 aa12.53□□□□□ -0.4
SIN3B-201ENST00000248054 TRBV19A0A075B6N1 114 aa12.53□□□□□ -0.4
SIN3B-201ENST00000248054 H3BRN7 92 aa12.53□□□□□ -0.4
SIN3B-201ENST00000248054 IGLC1P0CG04 106 aa12.53□□□□□ -0.4
SIN3B-201ENST00000248054 PIP4P2Q8N4L2 257 aa12.52□□□□□ -0.4
SIN3B-201ENST00000248054 FREM1Q5H8C1 2179 aa12.52□□□□□ -0.41
SIN3B-201ENST00000248054 POLEQ07864 2286 aa12.52□□□□□ -0.41
SIN3B-201ENST00000248054 USF3Q68DE3 2245 aa12.52□□□□□ -0.41
SIN3B-201ENST00000248054 PPIFP30405 207 aaKnown RBP12.52□□□□□ -0.41
SIN3B-201ENST00000248054 CFAP161Q6P656 301 aa12.52□□□□□ -0.41
SIN3B-201ENST00000248054 STHQ8IWL8 128 aa12.52□□□□□ -0.41
SIN3B-201ENST00000248054 COL4A2P08572 1712 aa12.51□□□□□ -0.41
SIN3B-201ENST00000248054 J3QKU1 62 aa12.51□□□□□ -0.41
SIN3B-201ENST00000248054 ATXN8Q156A1 80 aa12.51□□□□□ -0.41
SIN3B-201ENST00000248054 PRSS46E5RG02 174 aa12.51□□□□□ -0.41
SIN3B-201ENST00000248054 NDUFA4O00483 81 aa12.51□□□□□ -0.41
SIN3B-201ENST00000248054 IGLV2-14P01704 120 aa12.51□□□□□ -0.41
SIN3B-201ENST00000248054 RHPN1-AS1Q9BWJ2 59 aa12.51□□□□□ -0.41
SIN3B-201ENST00000248054 PRORYQ9H606 182 aa12.51□□□□□ -0.41
SIN3B-201ENST00000248054 GTSCR1Q86UQ5 136 aa12.51□□□□□ -0.41
SIN3B-201ENST00000248054 TRGV2A0A075B6R0 118 aa12.5□□□□□ -0.41
SIN3B-201ENST00000248054 IGKV3OR2-268A0A0C4DH90 116 aa12.5□□□□□ -0.41
SIN3B-201ENST00000248054 SMIM27A0A1W2PRY6 76 aa12.5□□□□□ -0.41
SIN3B-201ENST00000248054 GAGE12HA6NDE8 117 aa12.5□□□□□ -0.41
SIN3B-201ENST00000248054 K7EN84 100 aa12.5□□□□□ -0.41
SIN3B-201ENST00000248054 NCR2O95944 276 aa12.5□□□□□ -0.41
SIN3B-201ENST00000248054 TRAV2A0A0B4J234 112 aa12.5□□□□□ -0.41
SIN3B-201ENST00000248054 TRAV8-4A0A0B4J246 113 aa12.5□□□□□ -0.41
SIN3B-201ENST00000248054 WFDC12Q8WWY7 111 aa12.5□□□□□ -0.41
SIN3B-201ENST00000248054 DLX4Q92988 240 aaPredicted RBP12.49□□□□□ -0.41
SIN3B-201ENST00000248054 MALRD1Q5VYJ5 2156 aa12.49□□□□□ -0.41
SIN3B-201ENST00000248054 ARHGAP21Q5T5U3 1957 aa12.49□□□□□ -0.41
SIN3B-201ENST00000248054 CD300EQ496F6 205 aaPredicted RBP12.49□□□□□ -0.41
SIN3B-201ENST00000248054 GLMPQ8WWB7 406 aa12.49□□□□□ -0.41
SIN3B-201ENST00000248054 C11orf1Q9H5F2 150 aa12.49□□□□□ -0.41
SIN3B-201ENST00000248054 A0A1W2PRX2 142 aa12.48□□□□□ -0.41
SIN3B-201ENST00000248054 IGLV1-47P01700 117 aa12.48□□□□□ -0.41
SIN3B-201ENST00000248054 RNASE1P07998 156 aaKnown RBP12.48□□□□□ -0.41
SIN3B-201ENST00000248054 CGB3P0DN86 165 aa12.48□□□□□ -0.41
SIN3B-201ENST00000248054 CGB7P0DN87 165 aa12.48□□□□□ -0.41
SIN3B-201ENST00000248054 M0R2P5 195 aa12.48□□□□□ -0.41
SIN3B-201ENST00000248054 FRMD6-AS1P0C7T7 363 aa12.48□□□□□ -0.41
SIN3B-201ENST00000248054 TMEM158Q8WZ71 300 aa12.48□□□□□ -0.41
SIN3B-201ENST00000248054 GGTLC3B5MD39 225 aa12.48□□□□□ -0.41
SIN3B-201ENST00000248054 SPINK8P0C7L1 97 aa12.48□□□□□ -0.41
SIN3B-201ENST00000248054 OVOL2Q9BRP0 275 aa12.48□□□□□ -0.41
SIN3B-201ENST00000248054 ZC2HC1BQ5TFG8 222 aa12.47□□□□□ -0.41
SIN3B-201ENST00000248054 FAM104BQ5XKR9 115 aa12.47□□□□□ -0.41
SIN3B-201ENST00000248054 SPANXA1Q9NS26 97 aa12.47□□□□□ -0.41
SIN3B-201ENST00000248054 ODF3L1Q8IXM7 274 aa12.47□□□□□ -0.41
SIN3B-201ENST00000248054 Q96MF0 132 aa12.47□□□□□ -0.41
SIN3B-201ENST00000248054 NCKAP5O14513 1909 aa12.47□□□□□ -0.41
SIN3B-201ENST00000248054 PLA2G5P39877 138 aa12.47□□□□□ -0.41
SIN3B-201ENST00000248054 ZNF415Q09FC8 603 aa12.47□□□□□ -0.41
SIN3B-201ENST00000248054 FXYD5Q96DB9 178 aa12.47□□□□□ -0.41
SIN3B-201ENST00000248054 TOMM7Q9P0U1 55 aa12.47□□□□□ -0.41
SIN3B-201ENST00000248054 G3V318 75 aa12.46□□□□□ -0.41
SIN3B-201ENST00000248054 NDPQ00604 133 aa12.46□□□□□ -0.41
SIN3B-201ENST00000248054 AMN1Q8IY45 258 aa12.46□□□□□ -0.41
SIN3B-201ENST00000248054 TRAV8-1A0A0A6YYK1 113 aa12.46□□□□□ -0.41
SIN3B-201ENST00000248054 G3V4G9 280 aa12.46□□□□□ -0.41
SIN3B-201ENST00000248054 OVOL3O00110 214 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms