RNA–Protein interactions for RNA: ENST00000247003.8

DDX49-201, Transcript of DEAD-box helicase 49, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX49, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-201ENST00000247003 IGHV3-11P01762 117 aa11.62□□□□□ -0.55
DDX49-201ENST00000247003 ORM1P02763 201 aa11.62□□□□□ -0.55
DDX49-201ENST00000247003 C3orf79P0CE67 100 aa11.62□□□□□ -0.55
DDX49-201ENST00000247003 ERCC8Q13216 396 aa11.62□□□□□ -0.55
DDX49-201ENST00000247003 GLMPQ8WWB7 406 aa11.62□□□□□ -0.55
DDX49-201ENST00000247003 CRYBG3Q68DQ2 2970 aa11.62□□□□□ -0.55
DDX49-201ENST00000247003 SVEP1Q4LDE5 3571 aa11.61□□□□□ -0.55
DDX49-201ENST00000247003 PRAC2D3DTV9 90 aa11.61□□□□□ -0.55
DDX49-201ENST00000247003 TGFAP01135 160 aa11.61□□□□□ -0.55
DDX49-201ENST00000247003 ZNF493Q6ZR52 646 aa11.61□□□□□ -0.55
DDX49-201ENST00000247003 OR4X2Q8NGF9 303 aa11.61□□□□□ -0.55
DDX49-201ENST00000247003 PAM16Q9Y3D7 125 aa11.61□□□□□ -0.55
DDX49-201ENST00000247003 RNF114Q9Y508 228 aa11.61□□□□□ -0.55
DDX49-201ENST00000247003 TRBV12-3P01733 135 aa11.6□□□□□ -0.55
DDX49-201ENST00000247003 LINC00614P0C842 121 aa11.6□□□□□ -0.55
DDX49-201ENST00000247003 CTRLP40313 264 aa11.6□□□□□ -0.55
DDX49-201ENST00000247003 ZNF80P51504 273 aaPredicted RBP11.6□□□□□ -0.55
DDX49-201ENST00000247003 ZNF138P52744 262 aa11.6□□□□□ -0.55
DDX49-201ENST00000247003 SRSF1Q07955 248 aaKnown RBP eCLIP11.6□□□□□ -0.55
DDX49-201ENST00000247003 NPFFR1Q9GZQ6 430 aa11.6□□□□□ -0.55
DDX49-201ENST00000247003 ZNF580Q9UK33 172 aa11.6□□□□□ -0.55
DDX49-201ENST00000247003 UTP20O75691 2785 aaKnown RBP11.6□□□□□ -0.55
DDX49-201ENST00000247003 TRAV8-2A0A0B4J237 113 aa11.6□□□□□ -0.55
DDX49-201ENST00000247003 IGLV1-40P01703 118 aa11.6□□□□□ -0.55
DDX49-201ENST00000247003 BTF3P20290 206 aaKnown RBP11.6□□□□□ -0.55
DDX49-201ENST00000247003 LOXL1Q08397 574 aaPredicted RBP11.6□□□□□ -0.55
DDX49-201ENST00000247003 PMCHL1Q16048 86 aa11.6□□□□□ -0.55
DDX49-201ENST00000247003 DEFB112Q30KQ8 113 aa11.6□□□□□ -0.55
DDX49-201ENST00000247003 IL17RELQ6ZVW7 336 aa11.6□□□□□ -0.55
DDX49-201ENST00000247003 C20orf144Q9BQM9 153 aa11.6□□□□□ -0.55
DDX49-201ENST00000247003 UNQ9165/PRO28630Q6UXU0 137 aa11.59□□□□□ -0.55
DDX49-201ENST00000247003 BEX4Q9NWD9 120 aaPredicted RBP11.59□□□□□ -0.55
DDX49-201ENST00000247003 SPTAN1Q13813 2472 aaKnown RBP11.59□□□□□ -0.55
DDX49-201ENST00000247003 A0A096LNT2 108 aa11.58□□□□□ -0.56
DDX49-201ENST00000247003 IGHV1-24A0A0C4DH33 117 aa11.58□□□□□ -0.56
DDX49-201ENST00000247003 M0QZ24 198 aa11.58□□□□□ -0.56
DDX49-201ENST00000247003 IGHV4-59P01825 116 aa11.58□□□□□ -0.56
DDX49-201ENST00000247003 SSTP61278 116 aa11.58□□□□□ -0.56
DDX49-201ENST00000247003 HIST1H1AQ02539 215 aaPredicted RBP11.58□□□□□ -0.56
DDX49-201ENST00000247003 TWIST1Q15672 202 aa11.58□□□□□ -0.56
DDX49-201ENST00000247003 LINC01559Q495D7 138 aa11.58□□□□□ -0.56
DDX49-201ENST00000247003 LBHQ53QV2 105 aaPredicted RBP11.58□□□□□ -0.56
DDX49-201ENST00000247003 ZNF738Q8NE65 137 aa11.58□□□□□ -0.56
DDX49-201ENST00000247003 URB1-AS1Q96HZ7 61 aa11.58□□□□□ -0.56
DDX49-201ENST00000247003 AGPAT4-IT1Q9H0P7 198 aa11.58□□□□□ -0.56
DDX49-201ENST00000247003 KLK15Q9H2R5 256 aa11.58□□□□□ -0.56
DDX49-201ENST00000247003 RNF223E7ERA6 249 aa11.58□□□□□ -0.56
DDX49-201ENST00000247003 LEPROTL1O95214 131 aa11.58□□□□□ -0.56
DDX49-201ENST00000247003 OR5AL1P0C617 328 aa11.58□□□□□ -0.56
DDX49-201ENST00000247003 IGLC6P0CF74 106 aa11.58□□□□□ -0.56
DDX49-201ENST00000247003 C9orf47Q6ZRZ4 202 aa11.58□□□□□ -0.56
DDX49-201ENST00000247003 Q6ZS46 218 aa11.58□□□□□ -0.56
DDX49-201ENST00000247003 Q8N976 141 aa11.58□□□□□ -0.56
DDX49-201ENST00000247003 TMEM213A2RRL7 107 aa11.57□□□□□ -0.56
DDX49-201ENST00000247003 CSN3P07498 182 aa11.57□□□□□ -0.56
DDX49-201ENST00000247003 RPL11P62913 178 aaKnown RBP11.57□□□□□ -0.56
DDX49-201ENST00000247003 CFHR3Q02985 330 aa11.57□□□□□ -0.56
DDX49-201ENST00000247003 FAM104BQ5XKR9 115 aa11.57□□□□□ -0.56
DDX49-201ENST00000247003 FA2HQ7L5A8 372 aa11.57□□□□□ -0.56
DDX49-201ENST00000247003 TMEM70Q9BUB7 260 aa11.57□□□□□ -0.56
DDX49-201ENST00000247003 VPS13CQ709C8 3753 aa11.56□□□□□ -0.56
DDX49-201ENST00000247003 C20orf202A1L168 122 aa11.56□□□□□ -0.56
DDX49-201ENST00000247003 SMAD7O15105 426 aaKnown RBP11.56□□□□□ -0.56
DDX49-201ENST00000247003 ORMDL3Q8N138 153 aa11.56□□□□□ -0.56
DDX49-201ENST00000247003 MAPK1IP1LQ8NDC0 245 aa11.56□□□□□ -0.56
DDX49-201ENST00000247003 OR10J6PQ8NGY7 276 aa11.56□□□□□ -0.56
DDX49-201ENST00000247003 PRSS3P2Q8NHM4 247 aa11.56□□□□□ -0.56
DDX49-201ENST00000247003 DAZ1Q9NQZ3 744 aaKnown RBP11.56□□□□□ -0.56
DDX49-201ENST00000247003 AP5S1Q9NUS5 200 aa11.56□□□□□ -0.56
DDX49-201ENST00000247003 PEF1Q9UBV8 284 aaKnown RBP11.56□□□□□ -0.56
DDX49-201ENST00000247003 LENEPQ9Y5L5 61 aa11.56□□□□□ -0.56
DDX49-201ENST00000247003 TENM4Q6N022 2769 aa11.56□□□□□ -0.56
DDX49-201ENST00000247003 DEFB113Q30KQ7 82 aa11.56□□□□□ -0.56
DDX49-201ENST00000247003 TDRG1Q3Y452 100 aa11.56□□□□□ -0.56
DDX49-201ENST00000247003 FAM106AQ4KMX7 169 aa11.56□□□□□ -0.56
DDX49-201ENST00000247003 SPATA45Q537H7 98 aa11.56□□□□□ -0.56
DDX49-201ENST00000247003 EBLN2Q6P2I7 272 aa11.56□□□□□ -0.56
DDX49-201ENST00000247003 ZNF705AQ6ZN79 300 aaPredicted RBP11.56□□□□□ -0.56
DDX49-201ENST00000247003 LRRC75A-AS1Q8N1F1 130 aa11.56□□□□□ -0.56
DDX49-201ENST00000247003 MIEN1Q9BRT3 115 aa11.56□□□□□ -0.56
DDX49-201ENST00000247003 PPP1R14DQ9NXH3 145 aa11.56□□□□□ -0.56
DDX49-201ENST00000247003 IGHV7-4-1A0A0J9YVY3 117 aa11.55□□□□□ -0.56
DDX49-201ENST00000247003 TMEM89A2RUT3 159 aa11.55□□□□□ -0.56
DDX49-201ENST00000247003 D6R8Y8 96 aa11.55□□□□□ -0.56
DDX49-201ENST00000247003 OVOL1O14753 267 aa11.55□□□□□ -0.56
DDX49-201ENST00000247003 LCNL1Q6ZST4 164 aa11.55□□□□□ -0.56
DDX49-201ENST00000247003 AMN1Q8IY45 258 aa11.55□□□□□ -0.56
DDX49-201ENST00000247003 KLHDC1Q8N7A1 406 aa11.55□□□□□ -0.56
DDX49-201ENST00000247003 PRELID3AQ96N28 172 aa11.55□□□□□ -0.56
DDX49-201ENST00000247003 HSPB8Q9UJY1 196 aa11.55□□□□□ -0.56
DDX49-201ENST00000247003 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.54□□□□□ -0.562e-7■■■■□ 22.2
DDX49-201ENST00000247003 MUC21A0A0G2JKD1 596 aa11.54□□□□□ -0.56
DDX49-201ENST00000247003 MUC21A0A140T8X8 626 aa11.54□□□□□ -0.56
DDX49-201ENST00000247003 C2orf70A6NJV1 201 aa11.54□□□□□ -0.56
DDX49-201ENST00000247003 IGHV4-31P0DP07 118 aa11.54□□□□□ -0.56
DDX49-201ENST00000247003 PLA2G2AP14555 144 aa11.54□□□□□ -0.56
DDX49-201ENST00000247003 TMEM95Q3KNT9 176 aa11.54□□□□□ -0.56
DDX49-201ENST00000247003 Q5PR19 223 aa11.54□□□□□ -0.56
DDX49-201ENST00000247003 MUC21Q5SSG8 566 aa11.54□□□□□ -0.56
DDX49-201ENST00000247003 VPREB3Q9UKI3 123 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms