RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 CREBBPQ92793 2442 aa17.78■□□□□ 0.44
MSX2-201ENST00000239243 A0A1B0GUT8 65 aa17.78■□□□□ 0.44
MSX2-201ENST00000239243 SMAD7O15105 426 aaKnown RBP17.78■□□□□ 0.44
MSX2-201ENST00000239243 RPS20P60866 119 aaKnown RBP17.78■□□□□ 0.44
MSX2-201ENST00000239243 BORCS7Q96B45 105 aa17.78■□□□□ 0.44
MSX2-201ENST00000239243 PRAC2D3DTV9 90 aa17.78■□□□□ 0.44
MSX2-201ENST00000239243 K7EMT4 169 aa17.78■□□□□ 0.44
MSX2-201ENST00000239243 NUPR1O60356 82 aa17.78■□□□□ 0.44
MSX2-201ENST00000239243 RIGQ13278 110 aa17.78■□□□□ 0.44
MSX2-201ENST00000239243 IGHV7-4-1A0A0J9YVY3 117 aa17.77■□□□□ 0.44
MSX2-201ENST00000239243 SRSF2Q01130 221 aaKnown RBP17.77■□□□□ 0.44
MSX2-201ENST00000239243 ELANEP08246 267 aa17.76■□□□□ 0.43
MSX2-201ENST00000239243 LINC00310P59036 64 aa17.76■□□□□ 0.43
MSX2-201ENST00000239243 TMEM78Q5T7P6 136 aa17.76■□□□□ 0.43
MSX2-201ENST00000239243 GPHB5Q86YW7 130 aa17.76■□□□□ 0.43
MSX2-201ENST00000239243 SSBP4Q9BWG4 385 aaPredicted RBP17.76■□□□□ 0.43
MSX2-201ENST00000239243 ZNF702PQ9H963 129 aa17.76■□□□□ 0.43
MSX2-201ENST00000239243 FOXE3Q13461 319 aa17.76■□□□□ 0.43
MSX2-201ENST00000239243 ERCC8Q13216 396 aa17.75■□□□□ 0.43
MSX2-201ENST00000239243 WFDC11Q8NEX6 87 aa17.75■□□□□ 0.43
MSX2-201ENST00000239243 CHD6Q8TD26 2715 aa17.75■□□□□ 0.43
MSX2-201ENST00000239243 APCP25054 2843 aa17.75■□□□□ 0.43
MSX2-201ENST00000239243 PPP1R14DQ9NXH3 145 aa17.75■□□□□ 0.43
MSX2-201ENST00000239243 FABP5P3A8MUU1 101 aa17.74■□□□□ 0.43
MSX2-201ENST00000239243 F2Z2F3 143 aa17.74■□□□□ 0.43
MSX2-201ENST00000239243 ZNF138P52744 262 aa17.74■□□□□ 0.43
MSX2-201ENST00000239243 KLF5Q13887 457 aaPredicted RBP17.74■□□□□ 0.43
MSX2-201ENST00000239243 C9orf47Q6ZRZ4 202 aa17.74■□□□□ 0.43
MSX2-201ENST00000239243 C18orf32Q8TCD1 76 aa17.74■□□□□ 0.43
MSX2-201ENST00000239243 ALKBH7Q9BT30 221 aaPredicted RBP17.74■□□□□ 0.43
MSX2-201ENST00000239243 RHPN1-AS1Q9BWJ2 59 aa17.74■□□□□ 0.43
MSX2-201ENST00000239243 UFC1Q9Y3C8 167 aa17.74■□□□□ 0.43
MSX2-201ENST00000239243 DOPEY2Q9Y3R5 2298 aa17.74■□□□□ 0.43
MSX2-201ENST00000239243 SAMD10Q9BYL1 202 aa17.74■□□□□ 0.43
MSX2-201ENST00000239243 NRN1Q9NPD7 142 aa17.74■□□□□ 0.43
MSX2-201ENST00000239243 GSN-AS1Q9NRJ2 163 aa17.74■□□□□ 0.43
MSX2-201ENST00000239243 KCNS1Q96KK3 526 aa17.73■□□□□ 0.43
MSX2-201ENST00000239243 AGPAT4-IT1Q9H0P7 198 aa17.73■□□□□ 0.43
MSX2-201ENST00000239243 ARMS2P0C7Q2 107 aa17.72■□□□□ 0.43
MSX2-201ENST00000239243 IL17RELQ6ZVW7 336 aa17.72■□□□□ 0.43
MSX2-201ENST00000239243 GATD1Q8NB37 220 aa17.72■□□□□ 0.43
MSX2-201ENST00000239243 SMPXQ9UHP9 88 aa17.72■□□□□ 0.43
MSX2-201ENST00000239243 ZNF80P51504 273 aaPredicted RBP17.72■□□□□ 0.43
MSX2-201ENST00000239243 TM4SF20Q53R12 229 aa17.72■□□□□ 0.43
MSX2-201ENST00000239243 HIST2H2BCQ6DN03 193 aa17.72■□□□□ 0.43
MSX2-201ENST00000239243 TMEM86BQ8N661 226 aa17.72■□□□□ 0.43
MSX2-201ENST00000239243 ZANQ9Y493 2812 aa17.71■□□□□ 0.43
MSX2-201ENST00000239243 SOCS3O14543 225 aa17.71■□□□□ 0.43
MSX2-201ENST00000239243 RPLP1P05386 114 aaKnown RBP17.71■□□□□ 0.43
MSX2-201ENST00000239243 SAMD13Q5VXD3 122 aa17.71■□□□□ 0.43
MSX2-201ENST00000239243 C10orf99Q6UWK7 81 aa17.71■□□□□ 0.43
MSX2-201ENST00000239243 MYOZ3Q8TDC0 251 aa17.71■□□□□ 0.43
MSX2-201ENST00000239243 Q8N2B8 174 aa17.71■□□□□ 0.43
MSX2-201ENST00000239243 SIGLECL1Q8N7X8 197 aa17.71■□□□□ 0.43
MSX2-201ENST00000239243 ZNF738Q8NE65 137 aa17.71■□□□□ 0.43
MSX2-201ENST00000239243 LENEPQ9Y5L5 61 aa17.71■□□□□ 0.43
MSX2-201ENST00000239243 RPL11P62913 178 aaKnown RBP17.7■□□□□ 0.42
MSX2-201ENST00000239243 TPPP3Q9BW30 176 aa17.7■□□□□ 0.42
MSX2-201ENST00000239243 TENM4Q6N022 2769 aa17.7■□□□□ 0.42
MSX2-201ENST00000239243 TMSB15BA0A087X1C1 80 aa17.7■□□□□ 0.42
MSX2-201ENST00000239243 OVOL1O14753 267 aa17.7■□□□□ 0.42
MSX2-201ENST00000239243 LGALS1P09382 135 aaKnown RBP17.7■□□□□ 0.42
MSX2-201ENST00000239243 CDPF1Q6NVV7 123 aa17.7■□□□□ 0.42
MSX2-201ENST00000239243 RNF152Q8N8N0 203 aa17.7■□□□□ 0.42
MSX2-201ENST00000239243 UBE2E2Q96LR5 201 aa17.7■□□□□ 0.42
MSX2-201ENST00000239243 RCHY1Q96PM5 261 aa17.7■□□□□ 0.42
MSX2-201ENST00000239243 LOC102724200A0A096LPH7 203 aaPredicted RBP17.69■□□□□ 0.42
MSX2-201ENST00000239243 HIST1H1AQ02539 215 aaPredicted RBP17.69■□□□□ 0.42
MSX2-201ENST00000239243 IQCJQ1A5X6 159 aa17.69■□□□□ 0.42
MSX2-201ENST00000239243 LYZL1Q6UWQ5 148 aa17.68■□□□□ 0.42
MSX2-201ENST00000239243 ORM1P02763 201 aa17.68■□□□□ 0.42
MSX2-201ENST00000239243 GPX1P07203 203 aa17.68■□□□□ 0.42
MSX2-201ENST00000239243 LINC01559Q495D7 138 aa17.68■□□□□ 0.42
MSX2-201ENST00000239243 LINC00477Q96M19 166 aa17.68■□□□□ 0.42
MSX2-201ENST00000239243 CTRLP40313 264 aa17.67■□□□□ 0.42
MSX2-201ENST00000239243 FER1L6-AS1Q8NA97 138 aa17.67■□□□□ 0.42
MSX2-201ENST00000239243 OR10J6PQ8NGY7 276 aa17.67■□□□□ 0.42
MSX2-201ENST00000239243 ZNF324O75467 553 aaPredicted RBP17.67■□□□□ 0.42
MSX2-201ENST00000239243 C20orf173Q96LM9 149 aa17.67■□□□□ 0.42
MSX2-201ENST00000239243 FOXC2Q99958 501 aa17.67■□□□□ 0.42
MSX2-201ENST00000239243 AMTP48728 403 aa17.66■□□□□ 0.42
MSX2-201ENST00000239243 ZNF493Q6ZR52 646 aa17.66■□□□□ 0.42
MSX2-201ENST00000239243 IGLC6P0CF74 106 aa17.66■□□□□ 0.42
MSX2-201ENST00000239243 REC114Q7Z4M0 266 aa17.66■□□□□ 0.42
MSX2-201ENST00000239243 LGALS9O00182 355 aa17.64■□□□□ 0.41
MSX2-201ENST00000239243 HSBP1O75506 76 aa17.63■□□□□ 0.41
MSX2-201ENST00000239243 SCGB1D1O95968 90 aa17.63■□□□□ 0.41
MSX2-201ENST00000239243 ID1P41134 155 aa17.63■□□□□ 0.41
MSX2-201ENST00000239243 Q6ZWC4 215 aa17.63■□□□□ 0.41
MSX2-201ENST00000239243 PMCHP20382 165 aa17.63■□□□□ 0.41
MSX2-201ENST00000239243 DMRTA1Q5VZB9 504 aa17.63■□□□□ 0.41
MSX2-201ENST00000239243 DUX5Q96PT3 197 aa17.63■□□□□ 0.41
MSX2-201ENST00000239243 TMEM213A2RRL7 107 aa17.62■□□□□ 0.41
MSX2-201ENST00000239243 TEX15Q9BXT5 2789 aa17.62■□□□□ 0.41
MSX2-201ENST00000239243 CNFNQ9BYD5 112 aa17.61■□□□□ 0.41
MSX2-201ENST00000239243 NAGKQ9UJ70 344 aa17.61■□□□□ 0.41
MSX2-201ENST00000239243 ITPR3Q14573 2671 aa17.61■□□□□ 0.41
MSX2-201ENST00000239243 IGKV3-7A0A075B6H7 116 aa17.6■□□□□ 0.41
MSX2-201ENST00000239243 RNASEKQ6P5S7 137 aaKnown RBP17.6■□□□□ 0.41
MSX2-201ENST00000239243 IGHV4OR15-8A0A075B7B6 117 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms