RNA–Protein interactions for RNA: ENST00000238628.10

IFT43-201, Transcript of intraflagellar transport 43, humanhuman

TSL 1 (best) BASIC

Gene IFT43, Length 816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-201ENST00000238628 IGLC2P0DOY2 106 aa5.59□□□□□ -1.51
IFT43-201ENST00000238628 SRIP30626 198 aa5.59□□□□□ -1.51
IFT43-201ENST00000238628 RNASE4P34096 147 aaKnown RBP5.59□□□□□ -1.51
IFT43-201ENST00000238628 TCL1AP56279 114 aa5.59□□□□□ -1.51
IFT43-201ENST00000238628 CD300CQ08708 224 aa5.59□□□□□ -1.51
IFT43-201ENST00000238628 ERCC8Q13216 396 aa5.59□□□□□ -1.51
IFT43-201ENST00000238628 PPP1R1AQ13522 171 aa5.59□□□□□ -1.51
IFT43-201ENST00000238628 OPCMLQ14982 345 aa5.59□□□□□ -1.51
IFT43-201ENST00000238628 C10orf113Q5VZT2 155 aa5.59□□□□□ -1.51
IFT43-201ENST00000238628 NTN5Q8WTR8 489 aaPredicted RBP5.59□□□□□ -1.51
IFT43-201ENST00000238628 TMEM37Q8WXS4 190 aa5.59□□□□□ -1.51
IFT43-201ENST00000238628 LINC00477Q96M19 166 aa5.59□□□□□ -1.51
IFT43-201ENST00000238628 MRPL32Q9BYC8 188 aaKnown RBP5.59□□□□□ -1.51
IFT43-201ENST00000238628 MRPL16Q9NX20 251 aaKnown RBP5.59□□□□□ -1.51
IFT43-201ENST00000238628 FAM30AQ9NZY2 134 aa5.59□□□□□ -1.51
IFT43-201ENST00000238628 PKHD1L1Q86WI1 4243 aa5.59□□□□□ -1.51
IFT43-201ENST00000238628 FAT4Q6V0I7 4981 aa5.58□□□□□ -1.52
IFT43-201ENST00000238628 TRAV5A0A0B4J249 113 aa5.58□□□□□ -1.52
IFT43-201ENST00000238628 TRGV4A0A0C4DH28 118 aa5.58□□□□□ -1.52
IFT43-201ENST00000238628 LRCOL1A6NCL2 159 aa5.58□□□□□ -1.52
IFT43-201ENST00000238628 FABP12A6NFH5 140 aa5.58□□□□□ -1.52
IFT43-201ENST00000238628 KLLNB2CW77 178 aa5.58□□□□□ -1.52
IFT43-201ENST00000238628 K7EQD1 137 aa5.58□□□□□ -1.52
IFT43-201ENST00000238628 RGS13O14921 159 aa5.58□□□□□ -1.52
IFT43-201ENST00000238628 SSSCA1O60232 199 aa5.58□□□□□ -1.52
IFT43-201ENST00000238628 GPX1P07203 203 aa5.58□□□□□ -1.52
IFT43-201ENST00000238628 CRYGDP07320 174 aa5.58□□□□□ -1.52
IFT43-201ENST00000238628 BTN1A1Q13410 526 aa5.58□□□□□ -1.52
IFT43-201ENST00000238628 SPCS2Q15005 226 aa5.58□□□□□ -1.52
IFT43-201ENST00000238628 GUK1Q16774 197 aa5.58□□□□□ -1.52
IFT43-201ENST00000238628 IBA57Q5T440 356 aaKnown RBP5.58□□□□□ -1.52
IFT43-201ENST00000238628 MORN5Q5VZ52 161 aa5.58□□□□□ -1.52
IFT43-201ENST00000238628 TMEM14EPQ6UXP3 125 aa5.58□□□□□ -1.52
IFT43-201ENST00000238628 Q6ZRG5 221 aa5.58□□□□□ -1.52
IFT43-201ENST00000238628 ZNF546Q86UE3 836 aa5.58□□□□□ -1.52
IFT43-201ENST00000238628 TOMM5Q8N4H5 51 aa5.58□□□□□ -1.52
IFT43-201ENST00000238628 C10orf126Q8N4M7 172 aa5.58□□□□□ -1.52
IFT43-201ENST00000238628 VGLL1Q99990 258 aa5.58□□□□□ -1.52
IFT43-201ENST00000238628 SLC25A21Q9BQT8 299 aaPredicted RBP5.58□□□□□ -1.52
IFT43-201ENST00000238628 DNAJC4Q9NNZ3 241 aa5.58□□□□□ -1.52
IFT43-201ENST00000238628 TP53TG3Q9ULZ0 132 aa5.58□□□□□ -1.52
IFT43-201ENST00000238628 KRTAP4-8A0A0G2JLE6 195 aa5.57□□□□□ -1.52
IFT43-201ENST00000238628 OR4E1P0C645 316 aa5.57□□□□□ -1.52
IFT43-201ENST00000238628 TNFSF8P32971 234 aa5.57□□□□□ -1.52
IFT43-201ENST00000238628 ZNF415Q09FC8 603 aa5.57□□□□□ -1.52
IFT43-201ENST00000238628 MCFD2Q8NI22 146 aa5.57□□□□□ -1.52
IFT43-201ENST00000238628 PCNPQ8WW12 178 aaKnown RBP5.57□□□□□ -1.52
IFT43-201ENST00000238628 FAM19A4Q96LR4 140 aa5.57□□□□□ -1.52
IFT43-201ENST00000238628 ARPC5LQ9BPX5 153 aa5.57□□□□□ -1.52
IFT43-201ENST00000238628 AGPAT4-IT1Q9H0P7 198 aa5.57□□□□□ -1.52
IFT43-201ENST00000238628 IGHV1OR15-1A0A075B7D0 117 aa5.56□□□□□ -1.52
IFT43-201ENST00000238628 M0R3E3 92 aa5.56□□□□□ -1.52
IFT43-201ENST00000238628 ZNF253O75346 499 aa5.56□□□□□ -1.52
IFT43-201ENST00000238628 SCGB1D2O95969 90 aa5.56□□□□□ -1.52
IFT43-201ENST00000238628 C1QBP02746 253 aa5.56□□□□□ -1.52
IFT43-201ENST00000238628 ORM1P02763 201 aa5.56□□□□□ -1.52
IFT43-201ENST00000238628 SFTA3P0C7M3 94 aa5.56□□□□□ -1.52
IFT43-201ENST00000238628 GYPEP15421 78 aa5.56□□□□□ -1.52
IFT43-201ENST00000238628 AP3S2P59780 193 aa5.56□□□□□ -1.52
IFT43-201ENST00000238628 ARL16Q0P5N6 197 aa5.56□□□□□ -1.52
IFT43-201ENST00000238628 RAB31Q13636 194 aa5.56□□□□□ -1.52
IFT43-201ENST00000238628 IQCF2Q8IXL9 164 aa5.56□□□□□ -1.52
IFT43-201ENST00000238628 Q8N814 137 aa5.56□□□□□ -1.52
IFT43-201ENST00000238628 RAB2BQ8WUD1 216 aa5.56□□□□□ -1.52
IFT43-201ENST00000238628 MRPL53Q96EL3 112 aaKnown RBP5.56□□□□□ -1.52
IFT43-201ENST00000238628 MGST2Q99735 147 aa5.56□□□□□ -1.52
IFT43-201ENST00000238628 SOSTQ9BQB4 213 aa5.56□□□□□ -1.52
IFT43-201ENST00000238628 GGACTQ9BVM4 153 aa5.56□□□□□ -1.52
IFT43-201ENST00000238628 PRELID1Q9Y255 219 aa5.56□□□□□ -1.52
IFT43-201ENST00000238628 RCL1Q9Y2P8 373 aaKnown RBP5.56□□□□□ -1.52
IFT43-201ENST00000238628 TRBV19A0A075B6N1 114 aa5.55□□□□□ -1.52
IFT43-201ENST00000238628 C9orf170A2RU37 121 aa5.55□□□□□ -1.52
IFT43-201ENST00000238628 TSC22D2O75157 780 aa5.55□□□□□ -1.52
IFT43-201ENST00000238628 NMBP08949 121 aa5.55□□□□□ -1.52
IFT43-201ENST00000238628 CRISP2P16562 243 aa5.55□□□□□ -1.52
IFT43-201ENST00000238628 CAMLGP49069 296 aa5.55□□□□□ -1.52
IFT43-201ENST00000238628 TAS2R30P59541 319 aa5.55□□□□□ -1.52
IFT43-201ENST00000238628 PYDC2Q56P42 97 aa5.55□□□□□ -1.52
IFT43-201ENST00000238628 MIC13Q5XKP0 118 aa5.55□□□□□ -1.52
IFT43-201ENST00000238628 Q6ZQT7 251 aa5.55□□□□□ -1.52
IFT43-201ENST00000238628 C12orf45Q8N5I9 185 aaPredicted RBP5.55□□□□□ -1.52
IFT43-201ENST00000238628 OR1L4Q8NGR5 311 aa5.55□□□□□ -1.52
IFT43-201ENST00000238628 DYNC2LI1Q8TCX1 351 aa5.55□□□□□ -1.52
IFT43-201ENST00000238628 ZNF479Q96JC4 524 aa5.55□□□□□ -1.52
IFT43-201ENST00000238628 TXNDC17Q9BRA2 123 aa5.55□□□□□ -1.52
IFT43-201ENST00000238628 TIMM9Q9Y5J7 89 aa5.55□□□□□ -1.52
IFT43-201ENST00000238628 IGHV3-38A0A0C4DH36 116 aa5.54□□□□□ -1.52
IFT43-201ENST00000238628 IBA57-AS1B1ANH7 110 aa5.54□□□□□ -1.52
IFT43-201ENST00000238628 RS1O15537 224 aa5.54□□□□□ -1.52
IFT43-201ENST00000238628 SMIM18P0DKX4 95 aa5.54□□□□□ -1.52
IFT43-201ENST00000238628 HIST1H1EP10412 219 aaKnown RBP5.54□□□□□ -1.52
IFT43-201ENST00000238628 UBE2MP61081 183 aaKnown RBP5.54□□□□□ -1.52
IFT43-201ENST00000238628 TMEM78Q5T7P6 136 aa5.54□□□□□ -1.52
IFT43-201ENST00000238628 PRR9Q5T870 116 aa5.54□□□□□ -1.52
IFT43-201ENST00000238628 C9orf47Q6ZRZ4 202 aa5.54□□□□□ -1.52
IFT43-201ENST00000238628 NRARPQ7Z6K4 114 aa5.54□□□□□ -1.52
IFT43-201ENST00000238628 EXOC3-AS1Q8N2X6 119 aa5.54□□□□□ -1.52
IFT43-201ENST00000238628 ZFAND2AQ8N6M9 145 aa5.54□□□□□ -1.52
IFT43-201ENST00000238628 PFDN5Q99471 154 aa5.54□□□□□ -1.52
IFT43-201ENST00000238628 SRRQ9GZT4 340 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms