RNA–Protein interactions for RNA: ENST00000225603.8

CBX1-201, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-201ENST00000225603 COX19Q49B96 90 aa13.71□□□□□ -0.21
CBX1-201ENST00000225603 PRR27Q6MZM9 219 aa13.71□□□□□ -0.21
CBX1-201ENST00000225603 TMEM136Q6ZRR5 245 aa13.71□□□□□ -0.21
CBX1-201ENST00000225603 GRAMD2BQ96HH9 432 aa13.71□□□□□ -0.21
CBX1-201ENST00000225603 SGK494Q96LW2 274 aa13.71□□□□□ -0.21
CBX1-201ENST00000225603 GPR82Q96P67 336 aa13.71□□□□□ -0.21
CBX1-201ENST00000225603 DAZ1Q9NQZ3 744 aaKnown RBP13.71□□□□□ -0.21
CBX1-201ENST00000225603 TMEM213A2RRL7 107 aa13.71□□□□□ -0.22
CBX1-201ENST00000225603 IZUMO1RA6ND01 250 aa13.71□□□□□ -0.22
CBX1-201ENST00000225603 GZMBP10144 247 aa13.71□□□□□ -0.22
CBX1-201ENST00000225603 IGHV7-4-1A0A0J9YVY3 117 aa13.7□□□□□ -0.22
CBX1-201ENST00000225603 NUPR1O60356 82 aa13.7□□□□□ -0.22
CBX1-201ENST00000225603 CRISP2P16562 243 aa13.7□□□□□ -0.22
CBX1-201ENST00000225603 RPL7P18124 248 aaKnown RBP13.7□□□□□ -0.22
CBX1-201ENST00000225603 OR4F17Q8NGA8 305 aa13.7□□□□□ -0.22
CBX1-201ENST00000225603 DPF1Q92782 380 aa13.7□□□□□ -0.22
CBX1-201ENST00000225603 MLST8Q9BVC4 326 aa13.7□□□□□ -0.22
CBX1-201ENST00000225603 TP53TG3Q9ULZ0 132 aa13.7□□□□□ -0.22
CBX1-201ENST00000225603 K7EMT4 169 aa13.7□□□□□ -0.22
CBX1-201ENST00000225603 LTAP01374 205 aa13.7□□□□□ -0.22
CBX1-201ENST00000225603 MRPL54Q6P161 138 aaKnown RBP13.7□□□□□ -0.22
CBX1-201ENST00000225603 C16orf54Q6UWD8 224 aa13.7□□□□□ -0.22
CBX1-201ENST00000225603 REC114Q7Z4M0 266 aa13.7□□□□□ -0.22
CBX1-201ENST00000225603 GLMPQ8WWB7 406 aa13.7□□□□□ -0.22
CBX1-201ENST00000225603 NAT8BQ9UHF3 227 aa13.7□□□□□ -0.22
CBX1-201ENST00000225603 TRBV19A0A075B6N1 114 aa13.69□□□□□ -0.22
CBX1-201ENST00000225603 C1orf194Q5T5A4 169 aa13.69□□□□□ -0.22
CBX1-201ENST00000225603 RHPN1-AS1Q9BWJ2 59 aa13.69□□□□□ -0.22
CBX1-201ENST00000225603 SMPXQ9UHP9 88 aa13.69□□□□□ -0.22
CBX1-201ENST00000225603 UFC1Q9Y3C8 167 aa13.69□□□□□ -0.22
CBX1-201ENST00000225603 LGALS9O00182 355 aa13.68□□□□□ -0.22
CBX1-201ENST00000225603 S100A7P31151 101 aa13.68□□□□□ -0.22
CBX1-201ENST00000225603 PRIMA1Q86XR5 153 aa13.68□□□□□ -0.22
CBX1-201ENST00000225603 DLX4Q92988 240 aaPredicted RBP13.68□□□□□ -0.22
CBX1-201ENST00000225603 CHEK1O14757 476 aa13.68□□□□□ -0.22
CBX1-201ENST00000225603 NSUN5P1Q3KNT7 163 aa13.68□□□□□ -0.22
CBX1-201ENST00000225603 EXOC3-AS1Q8N2X6 119 aa13.68□□□□□ -0.22
CBX1-201ENST00000225603 CMTM2Q8TAZ6 248 aa13.68□□□□□ -0.22
CBX1-201ENST00000225603 A8MWP6 167 aa13.67□□□□□ -0.22
CBX1-201ENST00000225603 CCL24O00175 119 aa13.67□□□□□ -0.22
CBX1-201ENST00000225603 RNF24Q9Y225 148 aa13.67□□□□□ -0.22
CBX1-201ENST00000225603 ATRQ13535 2644 aa13.67□□□□□ -0.22
CBX1-201ENST00000225603 HLA-DQA1P01909 254 aa13.67□□□□□ -0.22
CBX1-201ENST00000225603 LINC00310P59036 64 aa13.67□□□□□ -0.22
CBX1-201ENST00000225603 RAB4BP61018 213 aa13.67□□□□□ -0.22
CBX1-201ENST00000225603 Q0VG73 95 aa13.67□□□□□ -0.22
CBX1-201ENST00000225603 FHL3Q13643 280 aa13.67□□□□□ -0.22
CBX1-201ENST00000225603 ADAMTSL5Q6ZMM2 481 aa13.67□□□□□ -0.22
CBX1-201ENST00000225603 TSKUQ8WUA8 353 aa13.67□□□□□ -0.22
CBX1-201ENST00000225603 ZNF785A8K8V0 405 aa13.66□□□□□ -0.22
CBX1-201ENST00000225603 PRB4P10163 310 aaPredicted RBP13.66□□□□□ -0.22
CBX1-201ENST00000225603 ESDP10768 282 aa13.66□□□□□ -0.22
CBX1-201ENST00000225603 KRTAP24-1Q3LI83 254 aa13.66□□□□□ -0.22
CBX1-201ENST00000225603 SIGLEC15Q6ZMC9 328 aa13.66□□□□□ -0.22
CBX1-201ENST00000225603 Q86TA4 180 aa13.66□□□□□ -0.22
CBX1-201ENST00000225603 NUP35Q8NFH5 326 aa13.66□□□□□ -0.22
CBX1-201ENST00000225603 C2orf70A6NJV1 201 aa13.66□□□□□ -0.22
CBX1-201ENST00000225603 SERF1AO75920 110 aa13.66□□□□□ -0.22
CBX1-201ENST00000225603 RASL11AQ6T310 242 aa13.66□□□□□ -0.22
CBX1-201ENST00000225603 LINC00322Q6ZN03 302 aaPredicted RBP13.66□□□□□ -0.22
CBX1-201ENST00000225603 NEU1Q99519 415 aa13.66□□□□□ -0.22
CBX1-201ENST00000225603 ZNF331Q9NQX6 463 aaPredicted RBP13.66□□□□□ -0.22
CBX1-201ENST00000225603 ZNF492Q9P255 531 aa13.66□□□□□ -0.22
CBX1-201ENST00000225603 TENM1Q9UKZ4 2725 aa13.65□□□□□ -0.22
CBX1-201ENST00000225603 A0A1W2PS18 150 aa13.65□□□□□ -0.22
CBX1-201ENST00000225603 IGFL4Q6B9Z1 124 aa13.65□□□□□ -0.22
CBX1-201ENST00000225603 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.65□□□□□ -0.22
CBX1-201ENST00000225603 GOLT1AQ6ZVE7 132 aa13.65□□□□□ -0.22
CBX1-201ENST00000225603 WNK1Q9H4A3 2382 aa13.65□□□□□ -0.22
CBX1-201ENST00000225603 BAGE3Q86Y29 109 aa13.64□□□□□ -0.23
CBX1-201ENST00000225603 LYPD1Q8N2G4 141 aa13.64□□□□□ -0.23
CBX1-201ENST00000225603 RPP21Q9H633 154 aaKnown RBP13.64□□□□□ -0.23
CBX1-201ENST00000225603 A0A087X0K7 114 aa13.64□□□□□ -0.23
CBX1-201ENST00000225603 TRAV8-1A0A0A6YYK1 113 aa13.64□□□□□ -0.23
CBX1-201ENST00000225603 C19orf71A6NCJ1 209 aa13.64□□□□□ -0.23
CBX1-201ENST00000225603 F2Z2F3 143 aa13.64□□□□□ -0.23
CBX1-201ENST00000225603 IGLV2-11P01706 119 aa13.64□□□□□ -0.23
CBX1-201ENST00000225603 PKIAP61925 76 aa13.64□□□□□ -0.23
CBX1-201ENST00000225603 KIAA1644Q3SXP7 199 aa13.64□□□□□ -0.23
CBX1-201ENST00000225603 TRBV6-1A0A0K0K1D8 114 aa13.63□□□□□ -0.23
CBX1-201ENST00000225603 HIGD1CA8MV81 97 aa13.63□□□□□ -0.23
CBX1-201ENST00000225603 APCSP02743 223 aa13.63□□□□□ -0.23
CBX1-201ENST00000225603 NDUFA11Q86Y39 141 aa13.63□□□□□ -0.23
CBX1-201ENST00000225603 OR9G4Q8NGQ1 327 aa13.63□□□□□ -0.23
CBX1-201ENST00000225603 P01737 135 aa13.63□□□□□ -0.23
CBX1-201ENST00000225603 HLA-DMBP28068 263 aa13.63□□□□□ -0.23
CBX1-201ENST00000225603 PAFAH1B2P68402 229 aa13.63□□□□□ -0.23
CBX1-201ENST00000225603 PDE6HQ13956 83 aa13.63□□□□□ -0.23
CBX1-201ENST00000225603 CT83Q5H943 113 aa13.63□□□□□ -0.23
CBX1-201ENST00000225603 IGKV3-7A0A075B6H7 116 aa13.62□□□□□ -0.23
CBX1-201ENST00000225603 OR10J3Q5JRS4 329 aa13.62□□□□□ -0.23
CBX1-201ENST00000225603 M0R3E3 92 aa13.62□□□□□ -0.23
CBX1-201ENST00000225603 GDF5OSQ5U4N7 250 aa13.62□□□□□ -0.23
CBX1-201ENST00000225603 TCF24Q7RTU0 167 aa13.62□□□□□ -0.23
CBX1-201ENST00000225603 PRNTQ86SH4 94 aa13.62□□□□□ -0.23
CBX1-201ENST00000225603 TRAV8-2A0A0B4J237 113 aa13.61□□□□□ -0.23
CBX1-201ENST00000225603 TSTD3H0UI37 97 aa13.61□□□□□ -0.23
CBX1-201ENST00000225603 SRIP30626 198 aa13.61□□□□□ -0.23
CBX1-201ENST00000225603 RPL11P62913 178 aaKnown RBP13.61□□□□□ -0.23
CBX1-201ENST00000225603 SLAQ13239 276 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms