RNA–Protein interactions for RNA: ENST00000223073.6

RBM28-201, Transcript of RNA binding motif protein 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RBM28, Length 15,507 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-201ENST00000223073 PATE1Q8WXA2 126 aa5.55□□□□□ -1.52
RBM28-201ENST00000223073 PTPRDP23468 1912 aa5.55□□□□□ -1.52
RBM28-201ENST00000223073 IGKV3D-7A0A0C4DH55 119 aa5.55□□□□□ -1.52
RBM28-201ENST00000223073 CELA3BP08861 270 aa5.55□□□□□ -1.52
RBM28-201ENST00000223073 SAA2P0DJI9 122 aaPredicted RBP5.55□□□□□ -1.52
RBM28-201ENST00000223073 SLC25A29Q8N8R3 303 aa5.54□□□□□ -1.52
RBM28-201ENST00000223073 ERCC8Q13216 396 aa5.54□□□□□ -1.52
RBM28-201ENST00000223073 DPM3Q9P2X0 92 aa5.54□□□□□ -1.52
RBM28-201ENST00000223073 CSRP2Q16527 193 aa5.54□□□□□ -1.52
RBM28-201ENST00000223073 SMIM2Q9BVW6 85 aa5.54□□□□□ -1.52
RBM28-201ENST00000223073 HAMPP81172 84 aa5.54□□□□□ -1.52
RBM28-201ENST00000223073 LY75O60449 1722 aa5.54□□□□□ -1.52
RBM28-201ENST00000223073 CXCL10P02778 98 aa5.54□□□□□ -1.52
RBM28-201ENST00000223073 TOPAZ1Q8N9V7 1692 aa5.54□□□□□ -1.52
RBM28-201ENST00000223073 FAM208BQ5VWN6 2430 aa5.54□□□□□ -1.52
RBM28-201ENST00000223073 ARFGEF1Q9Y6D6 1849 aa5.54□□□□□ -1.52
RBM28-201ENST00000223073 MBD3L4A6NDZ8 208 aaPredicted RBP5.54□□□□□ -1.52
RBM28-201ENST00000223073 MBD3L3A6NE82 208 aaPredicted RBP5.54□□□□□ -1.52
RBM28-201ENST00000223073 MBD3L5A6NJ08 208 aaPredicted RBP5.54□□□□□ -1.52
RBM28-201ENST00000223073 CCL3P10147 92 aa5.54□□□□□ -1.52
RBM28-201ENST00000223073 LOXL1Q08397 574 aaPredicted RBP5.54□□□□□ -1.52
RBM28-201ENST00000223073 Q6ZRM9 215 aa5.54□□□□□ -1.52
RBM28-201ENST00000223073 IGHV1-69DA0A0B4J2H0 117 aa5.54□□□□□ -1.52
RBM28-201ENST00000223073 C16orf97H3BN30 126 aa5.54□□□□□ -1.52
RBM28-201ENST00000223073 APELAP0DMC3 54 aa5.54□□□□□ -1.52
RBM28-201ENST00000223073 I3L3M4 83 aa5.54□□□□□ -1.52
RBM28-201ENST00000223073 CSRP1P21291 193 aaKnown RBP5.54□□□□□ -1.52
RBM28-201ENST00000223073 ALS2Q96Q42 1657 aa5.54□□□□□ -1.52
RBM28-201ENST00000223073 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.53□□□□□ -1.52
RBM28-201ENST00000223073 TRAV12-2A0A075B6T6 113 aa5.53□□□□□ -1.52
RBM28-201ENST00000223073 PMS2P5A8MQ11 134 aa5.53□□□□□ -1.52
RBM28-201ENST00000223073 TMEM133Q9H2Q1 129 aa5.53□□□□□ -1.52
RBM28-201ENST00000223073 TEX49A0A1B0GTD5 131 aa5.53□□□□□ -1.52
RBM28-201ENST00000223073 PRIMA1Q86XR5 153 aa5.53□□□□□ -1.52
RBM28-201ENST00000223073 TRBV19A0A075B6N1 114 aa5.53□□□□□ -1.52
RBM28-201ENST00000223073 RGPD8O14715 1765 aaPredicted RBP5.53□□□□□ -1.52
RBM28-201ENST00000223073 RGPD5Q99666 1765 aa5.53□□□□□ -1.52
RBM28-201ENST00000223073 IGHV1-45A0A0A0MS14 117 aa5.53□□□□□ -1.52
RBM28-201ENST00000223073 LINC01619G3V211 115 aa5.53□□□□□ -1.52
RBM28-201ENST00000223073 EML6Q6ZMW3 1958 aa5.53□□□□□ -1.52
RBM28-201ENST00000223073 TRAV3A0A0B4J244 114 aa5.53□□□□□ -1.52
RBM28-201ENST00000223073 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.53□□□□□ -1.52
RBM28-201ENST00000223073 RGPD2P0DJD1 1756 aa5.53□□□□□ -1.52
RBM28-201ENST00000223073 TOMM7Q9P0U1 55 aa5.53□□□□□ -1.52
RBM28-201ENST00000223073 TRBV6-1A0A0K0K1D8 114 aa5.53□□□□□ -1.52
RBM28-201ENST00000223073 LOC107984640A0A0U1RRK4 108 aa5.53□□□□□ -1.52
RBM28-201ENST00000223073 F8WEM9 126 aa5.53□□□□□ -1.52
RBM28-201ENST00000223073 ZNF501Q96CX3 271 aaPredicted RBP5.53□□□□□ -1.52
RBM28-201ENST00000223073 EXOC3-AS1Q8N2X6 119 aa5.53□□□□□ -1.52
RBM28-201ENST00000223073 NEU4Q8WWR8 484 aaPredicted RBP5.53□□□□□ -1.52
RBM28-201ENST00000223073 XGP55808 180 aa5.52□□□□□ -1.53
RBM28-201ENST00000223073 ZNF625Q96I27 306 aaPredicted RBP5.52□□□□□ -1.53
RBM28-201ENST00000223073 ZC2HC1AQ96GY0 325 aa5.52□□□□□ -1.53
RBM28-201ENST00000223073 RGPD3A6NKT7 1758 aaPredicted RBP5.52□□□□□ -1.53
RBM28-201ENST00000223073 RGPD4Q7Z3J3 1758 aa5.52□□□□□ -1.53
RBM28-201ENST00000223073 TAF1LQ8IZX4 1826 aa5.52□□□□□ -1.53
RBM28-201ENST00000223073 TRBV7-1A0A0A6YYK4 115 aa5.52□□□□□ -1.53
RBM28-201ENST00000223073 NBL1P41271 181 aa5.52□□□□□ -1.53
RBM28-201ENST00000223073 C2orf70A6NJV1 201 aa5.52□□□□□ -1.53
RBM28-201ENST00000223073 K7EM74 188 aa5.52□□□□□ -1.53
RBM28-201ENST00000223073 ZNF106Q9H2Y7 1883 aaKnown RBP5.52□□□□□ -1.53
RBM28-201ENST00000223073 C1orf210Q8IVY1 113 aa5.52□□□□□ -1.53
RBM28-201ENST00000223073 CMC4P56277 68 aaPredicted RBP5.52□□□□□ -1.53
RBM28-201ENST00000223073 SPINK14Q6IE38 97 aa5.52□□□□□ -1.53
RBM28-201ENST00000223073 EDN2P20800 178 aa5.51□□□□□ -1.53
RBM28-201ENST00000223073 C4orf48Q5BLP8 95 aa5.51□□□□□ -1.53
RBM28-201ENST00000223073 IGKV3D-11A0A0A0MRZ8 115 aa5.51□□□□□ -1.53
RBM28-201ENST00000223073 SUMO4Q6EEV6 95 aa5.51□□□□□ -1.53
RBM28-201ENST00000223073 TMEM167AQ8TBQ9 72 aa5.51□□□□□ -1.53
RBM28-201ENST00000223073 TP53TG1Q9Y2A0 90 aa5.51□□□□□ -1.53
RBM28-201ENST00000223073 GREB1LQ9C091 1923 aaPredicted RBP5.51□□□□□ -1.53
RBM28-201ENST00000223073 C16orf47Q6ZP98 133 aaPredicted RBP5.51□□□□□ -1.53
RBM28-201ENST00000223073 DAND5Q8N907 189 aa5.51□□□□□ -1.53
RBM28-201ENST00000223073 TMEM256-PLSCR3K7ERE1 68 aa5.51□□□□□ -1.53
RBM28-201ENST00000223073 C14orf178Q8N769 122 aaPredicted RBP5.51□□□□□ -1.53
RBM28-201ENST00000223073 FOXF2Q12947 444 aa5.51□□□□□ -1.53
RBM28-201ENST00000223073 NBR2O15453 112 aa5.51□□□□□ -1.53
RBM28-201ENST00000223073 AGPAT4-IT1Q9H0P7 198 aa5.51□□□□□ -1.53
RBM28-201ENST00000223073 COL11A1P12107 1806 aaPredicted RBP5.51□□□□□ -1.53
RBM28-201ENST00000223073 SCN7AQ01118 1682 aa5.51□□□□□ -1.53
RBM28-201ENST00000223073 IGHV3-64A0A075B6Q5 118 aa5.5□□□□□ -1.53
RBM28-201ENST00000223073 TCL1BO95988 128 aa5.5□□□□□ -1.53
RBM28-201ENST00000223073 LTBP4Q8N2S1 1624 aa5.5□□□□□ -1.53
RBM28-201ENST00000223073 IGKV1D-33P01593 117 aa5.5□□□□□ -1.53
RBM28-201ENST00000223073 IGKV1-33P01594 117 aa5.5□□□□□ -1.53
RBM28-201ENST00000223073 SRXN1Q9BYN0 137 aa5.5□□□□□ -1.53
RBM28-201ENST00000223073 A0A087WV48 116 aa5.5□□□□□ -1.53
RBM28-201ENST00000223073 FXYD7P58549 80 aa5.5□□□□□ -1.53
RBM28-201ENST00000223073 ARAP2Q8WZ64 1704 aa5.5□□□□□ -1.53
RBM28-201ENST00000223073 IGKV1-12A0A0C4DH73 117 aa5.5□□□□□ -1.53
RBM28-201ENST00000223073 IGKV1D-12P01611 117 aa5.5□□□□□ -1.53
RBM28-201ENST00000223073 SLC25A45Q8N413 288 aa5.5□□□□□ -1.53
RBM28-201ENST00000223073 FAM201AQ5SY85 155 aa5.5□□□□□ -1.53
RBM28-201ENST00000223073 TIMM17AQ99595 171 aa5.5□□□□□ -1.53
RBM28-201ENST00000223073 PLA2G2EQ9NZK7 142 aa5.5□□□□□ -1.53
RBM28-201ENST00000223073 DDX60LQ5H9U9 1706 aaKnown RBP5.5□□□□□ -1.53
RBM28-201ENST00000223073 TRBV30A0A0K0K1B3 111 aa5.5□□□□□ -1.53
RBM28-201ENST00000223073 A0A0J9YXY3 114 aa5.5□□□□□ -1.53
RBM28-201ENST00000223073 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.5□□□□□ -1.53
RBM28-201ENST00000223073 IGHV3-48P01763 117 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms