RNA–Protein interactions for RNA: ENST00000222728.3

HOXA6-201, Transcript of homeobox A6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA6, Length 989 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA6-201ENST00000222728 C5orf17Q8NAS9 161 aa14.4□□□□□ -0.1
HOXA6-201ENST00000222728 Q8TAT8 98 aa14.4□□□□□ -0.1
HOXA6-201ENST00000222728 TP53TG1Q9Y2A0 90 aa14.4□□□□□ -0.1
HOXA6-201ENST00000222728 CRXO43186 299 aaPredicted RBP14.39□□□□□ -0.11
HOXA6-201ENST00000222728 PAGE4O60829 102 aa14.39□□□□□ -0.11
HOXA6-201ENST00000222728 TMEM78Q5T7P6 136 aa14.39□□□□□ -0.11
HOXA6-201ENST00000222728 CST9LP1Q5W188 147 aa14.39□□□□□ -0.11
HOXA6-201ENST00000222728 OR11H2Q8NH07 326 aa14.39□□□□□ -0.11
HOXA6-201ENST00000222728 LINC00477Q96M19 166 aa14.39□□□□□ -0.11
HOXA6-201ENST00000222728 IGHV3OR16-12A0A075B7B8 117 aa14.38□□□□□ -0.11
HOXA6-201ENST00000222728 RBAKDNA6NC62 111 aa14.38□□□□□ -0.11
HOXA6-201ENST00000222728 RARRES2Q99969 163 aa14.38□□□□□ -0.11
HOXA6-201ENST00000222728 EPDR1Q9UM22 224 aa14.38□□□□□ -0.11
HOXA6-201ENST00000222728 TRAV8-1A0A0A6YYK1 113 aa14.37□□□□□ -0.11
HOXA6-201ENST00000222728 TRAV1-1A0A0B4J248 108 aa14.37□□□□□ -0.11
HOXA6-201ENST00000222728 IFNA7P01567 189 aa14.37□□□□□ -0.11
HOXA6-201ENST00000222728 TCRAP04437 139 aa14.37□□□□□ -0.11
HOXA6-201ENST00000222728 LEPP41159 167 aa14.37□□□□□ -0.11
HOXA6-201ENST00000222728 CDKN1BP46527 198 aa14.37□□□□□ -0.11
HOXA6-201ENST00000222728 ATP5G3P48201 142 aa14.37□□□□□ -0.11
HOXA6-201ENST00000222728 C1orf158Q8N1D5 194 aa14.37□□□□□ -0.11
HOXA6-201ENST00000222728 SGK494Q96LW2 274 aa14.37□□□□□ -0.11
HOXA6-201ENST00000222728 IGF2BP2-AS1Q96M15 143 aa14.37□□□□□ -0.11
HOXA6-201ENST00000222728 INSP01308 110 aa14.36□□□□□ -0.11
HOXA6-201ENST00000222728 HBE1P02100 147 aa14.36□□□□□ -0.11
HOXA6-201ENST00000222728 AMBPP02760 352 aa14.36□□□□□ -0.11
HOXA6-201ENST00000222728 RBMY1A1P0DJD3 496 aaKnown RBP14.36□□□□□ -0.11
HOXA6-201ENST00000222728 RBMY1CP0DJD4 496 aa14.36□□□□□ -0.11
HOXA6-201ENST00000222728 TSPOP30536 169 aa14.36□□□□□ -0.11
HOXA6-201ENST00000222728 ZNF138P52744 262 aa14.36□□□□□ -0.11
HOXA6-201ENST00000222728 RBMY1FQ15415 496 aaKnown RBP14.36□□□□□ -0.11
HOXA6-201ENST00000222728 FAM19A4Q96LR4 140 aa14.36□□□□□ -0.11
HOXA6-201ENST00000222728 ODF3Q96PU9 254 aa14.36□□□□□ -0.11
HOXA6-201ENST00000222728 ZNF492Q9P255 531 aa14.36□□□□□ -0.11
HOXA6-201ENST00000222728 GNG13Q9P2W3 67 aa14.36□□□□□ -0.11
HOXA6-201ENST00000222728 TEX46H3BTG2 121 aa14.35□□□□□ -0.11
HOXA6-201ENST00000222728 GFI1BQ5VTD9 330 aa14.35□□□□□ -0.11
HOXA6-201ENST00000222728 ARL6IP6Q8N6S5 226 aa14.35□□□□□ -0.11
HOXA6-201ENST00000222728 X6R8D5 127 aa14.35□□□□□ -0.11
HOXA6-201ENST00000222728 ZNF705AQ6ZN79 300 aaPredicted RBP14.34□□□□□ -0.11
HOXA6-201ENST00000222728 CCDC28AQ8IWP9 274 aa14.34□□□□□ -0.11
HOXA6-201ENST00000222728 ATG101Q9BSB4 218 aa14.34□□□□□ -0.11
HOXA6-201ENST00000222728 NKX6-2Q9C056 277 aaPredicted RBP14.34□□□□□ -0.11
HOXA6-201ENST00000222728 GOLT1BQ9Y3E0 138 aa14.34□□□□□ -0.11
HOXA6-201ENST00000222728 ARL2-SNX15V9GYD0 113 aa14.34□□□□□ -0.11
HOXA6-201ENST00000222728 TRAV34A0A0B4J273 112 aa14.33□□□□□ -0.12
HOXA6-201ENST00000222728 PEX7O00628 323 aa14.33□□□□□ -0.12
HOXA6-201ENST00000222728 DEFB4AO15263 64 aa14.33□□□□□ -0.12
HOXA6-201ENST00000222728 PPT1P50897 306 aa14.33□□□□□ -0.12
HOXA6-201ENST00000222728 BLOC1S1P78537 153 aa14.33□□□□□ -0.12
HOXA6-201ENST00000222728 BTN1A1Q13410 526 aa14.33□□□□□ -0.12
HOXA6-201ENST00000222728 PRR9Q5T870 116 aa14.33□□□□□ -0.12
HOXA6-201ENST00000222728 TEX261Q6UWH6 196 aa14.33□□□□□ -0.12
HOXA6-201ENST00000222728 ZFAND2AQ8N6M9 145 aa14.33□□□□□ -0.12
HOXA6-201ENST00000222728 CYB561D1Q8N8Q1 229 aa14.33□□□□□ -0.12
HOXA6-201ENST00000222728 LINC00479Q96M42 142 aa14.33□□□□□ -0.12
HOXA6-201ENST00000222728 TMEM208Q9BTX3 173 aa14.33□□□□□ -0.12
HOXA6-201ENST00000222728 TRAV12-3A0A0B4J271 114 aa14.32□□□□□ -0.12
HOXA6-201ENST00000222728 A0A0J9YWU9 116 aa14.32□□□□□ -0.12
HOXA6-201ENST00000222728 PRM2P04554 102 aa14.32□□□□□ -0.12
HOXA6-201ENST00000222728 CRISP2P16562 243 aa14.32□□□□□ -0.12
HOXA6-201ENST00000222728 RNASE4P34096 147 aaKnown RBP14.32□□□□□ -0.12
HOXA6-201ENST00000222728 PCNPQ8WW12 178 aaKnown RBP14.32□□□□□ -0.12
HOXA6-201ENST00000222728 MANBALQ9NQG1 85 aa14.32□□□□□ -0.12
HOXA6-201ENST00000222728 SERTM2A0A1B0GWG4 89 aa14.31□□□□□ -0.12
HOXA6-201ENST00000222728 KLLNB2CW77 178 aa14.31□□□□□ -0.12
HOXA6-201ENST00000222728 C11orf94C9JXX5 98 aa14.31□□□□□ -0.12
HOXA6-201ENST00000222728 K7EQM0 130 aa14.31□□□□□ -0.12
HOXA6-201ENST00000222728 IGLV2-11P01706 119 aa14.31□□□□□ -0.12
HOXA6-201ENST00000222728 GPX1P07203 203 aa14.31□□□□□ -0.12
HOXA6-201ENST00000222728 Q8NAQ8 132 aa14.31□□□□□ -0.12
HOXA6-201ENST00000222728 ZNF680Q8NEM1 530 aa14.31□□□□□ -0.12
HOXA6-201ENST00000222728 TVP23CQ96ET8 276 aa14.31□□□□□ -0.12
HOXA6-201ENST00000222728 PSG8Q9UQ74 426 aa14.31□□□□□ -0.12
HOXA6-201ENST00000222728 IGHV4-28A0A0C4DH34 117 aa14.3□□□□□ -0.12
HOXA6-201ENST00000222728 C7orf71A4D174 169 aa14.3□□□□□ -0.12
HOXA6-201ENST00000222728 ZNF705GA8MUZ8 300 aaPredicted RBP14.3□□□□□ -0.12
HOXA6-201ENST00000222728 Q6ZQT7 251 aa14.3□□□□□ -0.12
HOXA6-201ENST00000222728 PRNTQ86SH4 94 aa14.3□□□□□ -0.12
HOXA6-201ENST00000222728 TMEM75Q8N9X5 138 aa14.3□□□□□ -0.12
HOXA6-201ENST00000222728 HIST1H2BAQ96A08 127 aa14.3□□□□□ -0.12
HOXA6-201ENST00000222728 LINC01587Q99440 93 aa14.3□□□□□ -0.12
HOXA6-201ENST00000222728 EDA2RQ9HAV5 297 aa14.3□□□□□ -0.12
HOXA6-201ENST00000222728 SCO2A0A1W2PP80 73 aa14.29□□□□□ -0.12
HOXA6-201ENST00000222728 F6UZH7 168 aa14.29□□□□□ -0.12
HOXA6-201ENST00000222728 FLI1Q01543 452 aaPredicted RBP14.29□□□□□ -0.12
HOXA6-201ENST00000222728 IFNA1P01562 189 aa14.28□□□□□ -0.12
HOXA6-201ENST00000222728 MIFP14174 115 aa14.28□□□□□ -0.12
HOXA6-201ENST00000222728 HTN1P15515 57 aa14.28□□□□□ -0.12
HOXA6-201ENST00000222728 C8orf49Q96NF6 230 aa14.28□□□□□ -0.12
HOXA6-201ENST00000222728 TREM1Q9NP99 234 aa14.28□□□□□ -0.12
HOXA6-201ENST00000222728 DNAH7Q8WXX0 4024 aa14.28□□□□□ -0.12
HOXA6-201ENST00000222728 TRBV7-9A0A0J9YWB2 115 aa14.27□□□□□ -0.13
HOXA6-201ENST00000222728 NMBP08949 121 aa14.27□□□□□ -0.13
HOXA6-201ENST00000222728 BCL2P10415 239 aa14.27□□□□□ -0.13
HOXA6-201ENST00000222728 AKR1C3P42330 323 aa14.27□□□□□ -0.13
HOXA6-201ENST00000222728 TMEM256Q8N2U0 113 aa14.27□□□□□ -0.13
HOXA6-201ENST00000222728 LYPD6BQ8NI32 183 aa14.27□□□□□ -0.13
HOXA6-201ENST00000222728 NEU1Q99519 415 aa14.27□□□□□ -0.13
HOXA6-201ENST00000222728 LENEPQ9Y5L5 61 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms