RNA–Protein interactions for RNA: ENST00000221494.9

SF3A2-201, Transcript of splicing factor 3a subunit 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SF3A2, Length 1,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-201ENST00000221494 ZNF843Q8N446 348 aa12.49□□□□□ -0.41
SF3A2-201ENST00000221494 RNF125Q96EQ8 232 aa12.49□□□□□ -0.41
SF3A2-201ENST00000221494 CTSZQ9UBR2 303 aa12.49□□□□□ -0.41
SF3A2-201ENST00000221494 TIMM8BQ9Y5J9 83 aaPredicted RBP12.49□□□□□ -0.41
SF3A2-201ENST00000221494 INSIG2Q9Y5U4 225 aa12.49□□□□□ -0.41
SF3A2-201ENST00000221494 SAP30O75446 220 aa12.49□□□□□ -0.41
SF3A2-201ENST00000221494 MRPL51Q4U2R6 128 aaKnown RBP12.49□□□□□ -0.41
SF3A2-201ENST00000221494 ZNF491Q8N8L2 437 aa12.49□□□□□ -0.41
SF3A2-201ENST00000221494 CITED1Q99966 193 aa12.49□□□□□ -0.41
SF3A2-201ENST00000221494 ZMAT4Q9H898 229 aa12.49□□□□□ -0.41
SF3A2-201ENST00000221494 SPCS1Q9Y6A9 102 aa12.49□□□□□ -0.41
SF3A2-201ENST00000221494 K7EIM0 57 aa12.48□□□□□ -0.41
SF3A2-201ENST00000221494 LYPD2Q6UXB3 125 aa12.48□□□□□ -0.41
SF3A2-201ENST00000221494 CCL17Q92583 94 aa12.48□□□□□ -0.41
SF3A2-201ENST00000221494 ABCA4P78363 2273 aa12.48□□□□□ -0.41
SF3A2-201ENST00000221494 SH2D1AO60880 128 aa12.47□□□□□ -0.41
SF3A2-201ENST00000221494 NDUFS7O75251 213 aa12.47□□□□□ -0.41
SF3A2-201ENST00000221494 FAM106CPP0CH98 169 aa12.47□□□□□ -0.41
SF3A2-201ENST00000221494 SMIM13P0DJ93 91 aa12.47□□□□□ -0.41
SF3A2-201ENST00000221494 SRSF1Q07955 248 aaKnown RBP eCLIP12.47□□□□□ -0.41
SF3A2-201ENST00000221494 LOXL1Q08397 574 aaPredicted RBP12.47□□□□□ -0.41
SF3A2-201ENST00000221494 FOXE3Q13461 319 aa12.47□□□□□ -0.41
SF3A2-201ENST00000221494 FAM106AQ4KMX7 169 aa12.47□□□□□ -0.41
SF3A2-201ENST00000221494 CNFNQ9BYD5 112 aa12.47□□□□□ -0.41
SF3A2-201ENST00000221494 NXT2Q9NPJ8 142 aaKnown RBP12.47□□□□□ -0.41
SF3A2-201ENST00000221494 FLNCQ14315 2725 aa12.47□□□□□ -0.41
SF3A2-201ENST00000221494 A0A1W2PPR1 153 aa12.47□□□□□ -0.41
SF3A2-201ENST00000221494 BUB1B-PAK6H3BSN5 160 aa12.47□□□□□ -0.41
SF3A2-201ENST00000221494 SNAI2O43623 268 aa12.47□□□□□ -0.41
SF3A2-201ENST00000221494 SAMD13Q5VXD3 122 aa12.47□□□□□ -0.41
SF3A2-201ENST00000221494 AMN1Q8IY45 258 aa12.47□□□□□ -0.41
SF3A2-201ENST00000221494 MAP1LC3AQ9H492 121 aa12.47□□□□□ -0.41
SF3A2-201ENST00000221494 ZNF462Q96JM2 2506 aa12.46□□□□□ -0.41
SF3A2-201ENST00000221494 IGHV3-21A0A0B4J1V1 117 aa12.46□□□□□ -0.41
SF3A2-201ENST00000221494 IGHV3-72A0A0B4J1Y9 119 aa12.46□□□□□ -0.41
SF3A2-201ENST00000221494 IGLC6P0CF74 106 aa12.46□□□□□ -0.41
SF3A2-201ENST00000221494 CKS2P33552 79 aa12.46□□□□□ -0.41
SF3A2-201ENST00000221494 HRNRQ86YZ3 2850 aaPredicted RBP12.46□□□□□ -0.42
SF3A2-201ENST00000221494 CNTFRP26992 372 aa12.45□□□□□ -0.42
SF3A2-201ENST00000221494 LRBAP50851 2863 aa12.45□□□□□ -0.42
SF3A2-201ENST00000221494 TRAV26-1A0A087WT03 109 aa12.45□□□□□ -0.42
SF3A2-201ENST00000221494 LOC389332A0A1B0GUA5 103 aa12.45□□□□□ -0.42
SF3A2-201ENST00000221494 TMEM213A2RRL7 107 aa12.45□□□□□ -0.42
SF3A2-201ENST00000221494 ATP5LO75964 103 aa12.45□□□□□ -0.42
SF3A2-201ENST00000221494 EVI2AP22794 236 aa12.45□□□□□ -0.42
SF3A2-201ENST00000221494 SAMD5Q5TGI4 173 aa12.45□□□□□ -0.42
SF3A2-201ENST00000221494 C11orf71Q6IPW1 123 aa12.45□□□□□ -0.42
SF3A2-201ENST00000221494 Q71RC1 249 aaPredicted RBP12.45□□□□□ -0.42
SF3A2-201ENST00000221494 IGFBPL1Q8WX77 278 aa12.45□□□□□ -0.42
SF3A2-201ENST00000221494 C17orf77Q96MU5 243 aa12.45□□□□□ -0.42
SF3A2-201ENST00000221494 C8orf49Q96NF6 230 aa12.45□□□□□ -0.42
SF3A2-201ENST00000221494 TPPP3Q9BW30 176 aa12.45□□□□□ -0.42
SF3A2-201ENST00000221494 FCER1GP30273 86 aa12.44□□□□□ -0.42
SF3A2-201ENST00000221494 TAL2Q16559 108 aa12.44□□□□□ -0.42
SF3A2-201ENST00000221494 RALYQ9UKM9 306 aaKnown RBP12.44□□□□□ -0.42
SF3A2-201ENST00000221494 SCGB2A1O75556 95 aa12.43□□□□□ -0.42
SF3A2-201ENST00000221494 NPYP01303 97 aa12.43□□□□□ -0.42
SF3A2-201ENST00000221494 IL4P05112 153 aa12.43□□□□□ -0.42
SF3A2-201ENST00000221494 RPL7P18124 248 aaKnown RBP12.43□□□□□ -0.42
SF3A2-201ENST00000221494 DTX2Q86UW9 622 aa12.43□□□□□ -0.42
SF3A2-201ENST00000221494 RPEQ96AT9 228 aa12.43□□□□□ -0.42
SF3A2-201ENST00000221494 FBXL15Q9H469 300 aa12.43□□□□□ -0.42
SF3A2-201ENST00000221494 HILPDAQ9Y5L2 63 aa12.43□□□□□ -0.42
SF3A2-201ENST00000221494 ARFGEF3Q5TH69 2177 aa12.43□□□□□ -0.42
SF3A2-201ENST00000221494 COL12A1Q99715 3063 aa12.43□□□□□ -0.42
SF3A2-201ENST00000221494 PLXNB1O43157 2135 aa12.43□□□□□ -0.42
SF3A2-201ENST00000221494 USP9XQ93008 2570 aaPredicted RBP12.43□□□□□ -0.42
SF3A2-201ENST00000221494 NMUP48645 174 aa12.43□□□□□ -0.42
SF3A2-201ENST00000221494 HERV-K104P63124 156 aa12.43□□□□□ -0.42
SF3A2-201ENST00000221494 PRR25Q96S07 402 aa12.43□□□□□ -0.42
SF3A2-201ENST00000221494 TM2D2Q9BX73 214 aa12.43□□□□□ -0.42
SF3A2-201ENST00000221494 DOPEY1Q5JWR5 2465 aa12.42□□□□□ -0.42
SF3A2-201ENST00000221494 MALRD1Q5VYJ5 2156 aa12.42□□□□□ -0.42
SF3A2-201ENST00000221494 LYNX1G3V0Z9 82 aa12.42□□□□□ -0.42
SF3A2-201ENST00000221494 LY6LH3BQJ8 138 aa12.42□□□□□ -0.42
SF3A2-201ENST00000221494 LYNX1P0DP58 116 aa12.42□□□□□ -0.42
SF3A2-201ENST00000221494 GLMPQ8WWB7 406 aa12.42□□□□□ -0.42
SF3A2-201ENST00000221494 VCX2Q9H322 139 aa12.42□□□□□ -0.42
SF3A2-201ENST00000221494 MYO18BQ8IUG5 2567 aa12.42□□□□□ -0.42
SF3A2-201ENST00000221494 FCGR2BP31994 310 aaPredicted RBP12.41□□□□□ -0.42
SF3A2-201ENST00000221494 MFAP4P55083 255 aa12.41□□□□□ -0.42
SF3A2-201ENST00000221494 RIPPLY3P57055 190 aa12.41□□□□□ -0.42
SF3A2-201ENST00000221494 PCP2Q8IVA1 136 aa12.41□□□□□ -0.42
SF3A2-201ENST00000221494 NPIPB5A8MRT5 1133 aa12.41□□□□□ -0.42
SF3A2-201ENST00000221494 M0R3E3 92 aa12.41□□□□□ -0.42
SF3A2-201ENST00000221494 ZNF207O43670 478 aaKnown RBP12.41□□□□□ -0.42
SF3A2-201ENST00000221494 APELAP0DMC3 54 aa12.41□□□□□ -0.42
SF3A2-201ENST00000221494 TWIST1Q15672 202 aa12.41□□□□□ -0.42
SF3A2-201ENST00000221494 CNIH1O95406 144 aa12.4□□□□□ -0.42
SF3A2-201ENST00000221494 NPBQ8NG41 125 aa12.4□□□□□ -0.42
SF3A2-201ENST00000221494 CHAC1Q9BUX1 264 aa12.4□□□□□ -0.42
SF3A2-201ENST00000221494 HHLA3Q9XRX5 114 aa12.4□□□□□ -0.42
SF3A2-201ENST00000221494 LINC01619G3V211 115 aa12.39□□□□□ -0.43
SF3A2-201ENST00000221494 J3QR89 54 aa12.39□□□□□ -0.43
SF3A2-201ENST00000221494 GNG7O60262 68 aa12.39□□□□□ -0.43
SF3A2-201ENST00000221494 NDUFA3O95167 84 aa12.39□□□□□ -0.43
SF3A2-201ENST00000221494 IGKCP01834 107 aa12.39□□□□□ -0.43
SF3A2-201ENST00000221494 EGR2P11161 476 aaPredicted RBP12.39□□□□□ -0.43
SF3A2-201ENST00000221494 ARL3P36405 182 aa12.39□□□□□ -0.43
SF3A2-201ENST00000221494 BCL6BQ8N143 479 aaPredicted RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms