RNA–Protein interactions for RNA: ENST00000219299.8

CCDC113-201, Transcript of coiled-coil domain containing 113, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC113, Length 5,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-201ENST00000219299 SYS1-DBNDD2H3BUS1 97 aa7.54□□□□□ -1.2
CCDC113-201ENST00000219299 ORMDL2Q53FV1 153 aa7.54□□□□□ -1.2
CCDC113-201ENST00000219299 ZNF562Q6V9R5 426 aa7.54□□□□□ -1.2
CCDC113-201ENST00000219299 KIR3DL3Q8N743 410 aa7.54□□□□□ -1.2
CCDC113-201ENST00000219299 hDV102S1A0JD36 115 aa7.54□□□□□ -1.2
CCDC113-201ENST00000219299 PYYP10082 97 aa7.54□□□□□ -1.2
CCDC113-201ENST00000219299 PLA2G2AP14555 144 aa7.54□□□□□ -1.2
CCDC113-201ENST00000219299 SPSB3Q6PJ21 355 aa7.54□□□□□ -1.2
CCDC113-201ENST00000219299 SFTA2Q6UW10 78 aa7.54□□□□□ -1.2
CCDC113-201ENST00000219299 C1orf122Q6ZSJ8 110 aa7.54□□□□□ -1.2
CCDC113-201ENST00000219299 NAA38Q9BRA0 125 aaKnown RBP7.54□□□□□ -1.2
CCDC113-201ENST00000219299 SPANXA1Q9NS26 97 aa7.54□□□□□ -1.2
CCDC113-201ENST00000219299 IGKV3-20P01619 116 aa7.54□□□□□ -1.2
CCDC113-201ENST00000219299 ZNF833PQ6ZTB9 187 aa7.54□□□□□ -1.2
CCDC113-201ENST00000219299 OR13C6PQ8NH95 151 aa7.54□□□□□ -1.2
CCDC113-201ENST00000219299 PSG8Q9UQ74 426 aa7.54□□□□□ -1.2
CCDC113-201ENST00000219299 EYSQ5T1H1 3165 aa7.54□□□□□ -1.2
CCDC113-201ENST00000219299 ZNF815PA8K554 130 aa7.54□□□□□ -1.2
CCDC113-201ENST00000219299 KIR3DS1Q14943 382 aa7.54□□□□□ -1.2
CCDC113-201ENST00000219299 SELENOKQ9Y6D0 94 aa7.54□□□□□ -1.2
CCDC113-201ENST00000219299 LINC01549A6NIU2 74 aa7.53□□□□□ -1.2
CCDC113-201ENST00000219299 G3V318 75 aa7.53□□□□□ -1.2
CCDC113-201ENST00000219299 IGHV4-38-2P0DP08 117 aa7.53□□□□□ -1.2
CCDC113-201ENST00000219299 CHTOPQ9Y3Y2 248 aaKnown RBP7.53□□□□□ -1.2
CCDC113-201ENST00000219299 ANKRD17O75179 2603 aaKnown RBP7.53□□□□□ -1.2
CCDC113-201ENST00000219299 PFN1P07737 140 aaKnown RBP7.53□□□□□ -1.2
CCDC113-201ENST00000219299 MLANAQ16655 118 aa7.53□□□□□ -1.2
CCDC113-201ENST00000219299 DEFB112Q30KQ8 113 aa7.53□□□□□ -1.2
CCDC113-201ENST00000219299 NPSP0C0P6 89 aa7.53□□□□□ -1.2
CCDC113-201ENST00000219299 RFNGQ9Y644 331 aa7.53□□□□□ -1.2
CCDC113-201ENST00000219299 TNRC6BQ9UPQ9 1833 aaKnown RBP7.53□□□□□ -1.2
CCDC113-201ENST00000219299 A0A1W2PPI3 338 aa7.53□□□□□ -1.2
CCDC113-201ENST00000219299 ATP6V0E1O15342 81 aa7.52□□□□□ -1.2
CCDC113-201ENST00000219299 CD33P20138 364 aa7.52□□□□□ -1.2
CCDC113-201ENST00000219299 RNF125Q96EQ8 232 aa7.52□□□□□ -1.2
CCDC113-201ENST00000219299 TPSG1Q9NRR2 321 aa7.52□□□□□ -1.2
CCDC113-201ENST00000219299 PTPRBP23467 1997 aa7.52□□□□□ -1.21
CCDC113-201ENST00000219299 DLX4Q92988 240 aaPredicted RBP7.52□□□□□ -1.21
CCDC113-201ENST00000219299 TRAV5A0A0B4J249 113 aa7.52□□□□□ -1.21
CCDC113-201ENST00000219299 IGHV4-59P01825 116 aa7.52□□□□□ -1.21
CCDC113-201ENST00000219299 SSBP2P81877 361 aaPredicted RBP7.52□□□□□ -1.21
CCDC113-201ENST00000219299 TNFRSF18Q9Y5U5 241 aa7.52□□□□□ -1.21
CCDC113-201ENST00000219299 NCKAP5O14513 1909 aa7.52□□□□□ -1.21
CCDC113-201ENST00000219299 LAMA1P25391 3075 aa7.52□□□□□ -1.21
CCDC113-201ENST00000219299 SRRM4A7MD48 611 aaKnown RBP7.52□□□□□ -1.21
CCDC113-201ENST00000219299 F2Z2F3 143 aa7.52□□□□□ -1.21
CCDC113-201ENST00000219299 IGKV1-39P01597 117 aa7.52□□□□□ -1.21
CCDC113-201ENST00000219299 IGKV1D-39P04432 117 aa7.52□□□□□ -1.21
CCDC113-201ENST00000219299 ERG28Q9UKR5 140 aa7.52□□□□□ -1.21
CCDC113-201ENST00000219299 CENPVL3A0A0U1RRI6 287 aa7.51□□□□□ -1.21
CCDC113-201ENST00000219299 HOXB4P17483 251 aaPredicted RBP7.51□□□□□ -1.21
CCDC113-201ENST00000219299 PAX8Q06710 450 aa7.51□□□□□ -1.21
CCDC113-201ENST00000219299 WFDC11Q8NEX6 87 aa7.51□□□□□ -1.21
CCDC113-201ENST00000219299 CFAP54Q96N23 3096 aa7.51□□□□□ -1.21
CCDC113-201ENST00000219299 LMO4P61968 165 aa7.51□□□□□ -1.21
CCDC113-201ENST00000219299 FAM120AOSQ5T036 256 aa7.51□□□□□ -1.21
CCDC113-201ENST00000219299 PLNP26678 52 aa7.51□□□□□ -1.21
CCDC113-201ENST00000219299 PIP4P2Q8N4L2 257 aa7.51□□□□□ -1.21
CCDC113-201ENST00000219299 NUP35Q8NFH5 326 aa7.51□□□□□ -1.21
CCDC113-201ENST00000219299 DUX3Q96PT4 197 aa7.51□□□□□ -1.21
CCDC113-201ENST00000219299 A0A1B0GWJ7 208 aa7.51□□□□□ -1.21
CCDC113-201ENST00000219299 SPINK8P0C7L1 97 aa7.51□□□□□ -1.21
CCDC113-201ENST00000219299 ATXN8Q156A1 80 aa7.51□□□□□ -1.21
CCDC113-201ENST00000219299 ADAMTSL5Q6ZMM2 481 aa7.51□□□□□ -1.21
CCDC113-201ENST00000219299 SPATA31B1PQ5VZV4 182 aa7.5□□□□□ -1.21
CCDC113-201ENST00000219299 GTSCR1Q86UQ5 136 aa7.5□□□□□ -1.21
CCDC113-201ENST00000219299 TMEM101Q96IK0 257 aa7.5□□□□□ -1.21
CCDC113-201ENST00000219299 STHQ8IWL8 128 aa7.5□□□□□ -1.21
CCDC113-201ENST00000219299 OR11H6Q8NGC7 330 aa7.5□□□□□ -1.21
CCDC113-201ENST00000219299 MGST2Q99735 147 aa7.5□□□□□ -1.21
CCDC113-201ENST00000219299 IGLC2P0DOY2 106 aa7.5□□□□□ -1.21
CCDC113-201ENST00000219299 IGLC3P0DOY3 106 aa7.5□□□□□ -1.21
CCDC113-201ENST00000219299 RNF182Q8N6D2 247 aa7.5□□□□□ -1.21
CCDC113-201ENST00000219299 KLHL30-AS1Q8NEE0 82 aa7.5□□□□□ -1.21
CCDC113-201ENST00000219299 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.5□□□□□ -1.21
CCDC113-201ENST00000219299 TRAV2A0A0B4J234 112 aa7.5□□□□□ -1.21
CCDC113-201ENST00000219299 TRBV7-9A0A0J9YWB2 115 aa7.5□□□□□ -1.21
CCDC113-201ENST00000219299 RNASE2P10153 161 aaKnown RBP7.5□□□□□ -1.21
CCDC113-201ENST00000219299 LCNL1Q6ZST4 164 aa7.5□□□□□ -1.21
CCDC113-201ENST00000219299 SRSF8Q9BRL6 282 aaKnown RBP7.5□□□□□ -1.21
CCDC113-201ENST00000219299 RBMY1BA6NDE4 496 aaKnown RBP7.5□□□□□ -1.21
CCDC113-201ENST00000219299 RBMY1EA6NEQ0 496 aaKnown RBP7.5□□□□□ -1.21
CCDC113-201ENST00000219299 C15orf62A8K5M9 175 aa7.5□□□□□ -1.21
CCDC113-201ENST00000219299 RBMY1DP0C7P1 496 aaKnown RBP7.5□□□□□ -1.21
CCDC113-201ENST00000219299 RBMY1A1P0DJD3 496 aaKnown RBP7.5□□□□□ -1.21
CCDC113-201ENST00000219299 RBMY1CP0DJD4 496 aa7.5□□□□□ -1.21
CCDC113-201ENST00000219299 IFI27P40305 119 aaPredicted RBP7.5□□□□□ -1.21
CCDC113-201ENST00000219299 LAGE3Q14657 143 aa7.5□□□□□ -1.21
CCDC113-201ENST00000219299 PSG3Q16557 428 aa7.5□□□□□ -1.21
CCDC113-201ENST00000219299 SEPSECSQ9HD40 501 aaKnown RBP7.5□□□□□ -1.21
CCDC113-201ENST00000219299 OVOL1O14753 267 aa7.49□□□□□ -1.21
CCDC113-201ENST00000219299 C3orf56Q8N813 242 aa7.49□□□□□ -1.21
CCDC113-201ENST00000219299 HELZ2Q9BYK8 2649 aaKnown RBP7.49□□□□□ -1.21
CCDC113-201ENST00000219299 TMEM14BQ9NUH8 114 aa7.49□□□□□ -1.21
CCDC113-201ENST00000219299 SORL1Q92673 2214 aa7.49□□□□□ -1.21
CCDC113-201ENST00000219299 D6R8Y8 96 aa7.49□□□□□ -1.21
CCDC113-201ENST00000219299 USMG5Q96IX5 58 aa7.49□□□□□ -1.21
CCDC113-201ENST00000219299 SPAG8Q99932 426 aaPredicted RBP7.49□□□□□ -1.21
CCDC113-201ENST00000219299 C2CD3Q4AC94 2353 aa7.49□□□□□ -1.21
CCDC113-201ENST00000219299 Q8N7P7 452 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms