RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 SNHG12Q9BXW3 62 aa3.56□□□□□ -1.84
CHD9-201ENST00000219084 CRIM1Q9NZV1 1036 aa3.56□□□□□ -1.84
CHD9-201ENST00000219084 IGHV3OR16-12A0A075B7B8 117 aa3.56□□□□□ -1.84
CHD9-201ENST00000219084 TRAV8-1A0A0A6YYK1 113 aa3.56□□□□□ -1.84
CHD9-201ENST00000219084 NDUFA4O00483 81 aa3.56□□□□□ -1.84
CHD9-201ENST00000219084 SS18Q15532 418 aa3.56□□□□□ -1.84
CHD9-201ENST00000219084 A0A1W2PPI3 338 aa3.56□□□□□ -1.84
CHD9-201ENST00000219084 hDV102S1A0JD36 115 aa3.56□□□□□ -1.84
CHD9-201ENST00000219084 A6NNC1 897 aa3.56□□□□□ -1.84
CHD9-201ENST00000219084 SRRM4A7MD48 611 aaKnown RBP3.56□□□□□ -1.84
CHD9-201ENST00000219084 K7EP13 123 aa3.56□□□□□ -1.84
CHD9-201ENST00000219084 Q6ZWC4 215 aa3.56□□□□□ -1.84
CHD9-201ENST00000219084 RNF166Q96A37 237 aaPredicted RBP3.56□□□□□ -1.84
CHD9-201ENST00000219084 TRGV4A0A0C4DH28 118 aa3.56□□□□□ -1.84
CHD9-201ENST00000219084 IGLV1-44P01699 117 aa3.56□□□□□ -1.84
CHD9-201ENST00000219084 ZC2HC1BQ5TFG8 222 aa3.56□□□□□ -1.84
CHD9-201ENST00000219084 LINC01560Q8TB33 94 aa3.56□□□□□ -1.84
CHD9-201ENST00000219084 HIGD1BQ9P298 99 aa3.56□□□□□ -1.84
CHD9-201ENST00000219084 IGHV1-69DA0A0B4J2H0 117 aa3.56□□□□□ -1.84
CHD9-201ENST00000219084 SLAQ13239 276 aa3.56□□□□□ -1.84
CHD9-201ENST00000219084 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.56□□□□□ -1.84
CHD9-201ENST00000219084 ATP6V0E2Q8NHE4 81 aa3.56□□□□□ -1.84
CHD9-201ENST00000219084 NOTCH3Q9UM47 2321 aa3.56□□□□□ -1.84
CHD9-201ENST00000219084 IGKV1-6A0A0C4DH72 117 aa3.56□□□□□ -1.84
CHD9-201ENST00000219084 CDKN1AP38936 164 aa3.56□□□□□ -1.84
CHD9-201ENST00000219084 ZNF134P52741 427 aa3.56□□□□□ -1.84
CHD9-201ENST00000219084 HERVK_113P63121 156 aa3.56□□□□□ -1.84
CHD9-201ENST00000219084 BVES-AS1Q5T3Y7 98 aa3.56□□□□□ -1.84
CHD9-201ENST00000219084 C15orf65H3BRN8 121 aa3.55□□□□□ -1.84
CHD9-201ENST00000219084 IGHV3-23P01764 117 aa3.55□□□□□ -1.84
CHD9-201ENST00000219084 RPL15P61313 204 aaKnown RBP3.55□□□□□ -1.84
CHD9-201ENST00000219084 PINLYPA6NC86 204 aa3.55□□□□□ -1.84
CHD9-201ENST00000219084 VWC2LB2RUY7 222 aa3.55□□□□□ -1.84
CHD9-201ENST00000219084 JPT2Q9H910 190 aa3.55□□□□□ -1.84
CHD9-201ENST00000219084 PRO1854Q9UHT4 67 aa3.55□□□□□ -1.84
CHD9-201ENST00000219084 SOCS3O14543 225 aa3.55□□□□□ -1.84
CHD9-201ENST00000219084 ATP5G1P05496 136 aa3.55□□□□□ -1.84
CHD9-201ENST00000219084 Q6ZRM9 215 aa3.55□□□□□ -1.84
CHD9-201ENST00000219084 FXYD5Q96DB9 178 aa3.55□□□□□ -1.84
CHD9-201ENST00000219084 HS3ST6Q96QI5 342 aa3.55□□□□□ -1.84
CHD9-201ENST00000219084 PTPRQQ9UMZ3 2332 aa3.55□□□□□ -1.84
CHD9-201ENST00000219084 Q0VFX4 171 aa3.55□□□□□ -1.84
CHD9-201ENST00000219084 FOXE3Q13461 319 aa3.55□□□□□ -1.84
CHD9-201ENST00000219084 IGF2-ASQ6U949 168 aa3.55□□□□□ -1.84
CHD9-201ENST00000219084 GVINP1Q7Z2Y8 2422 aa3.55□□□□□ -1.84
CHD9-201ENST00000219084 A0A087WX48 190 aa3.55□□□□□ -1.84
CHD9-201ENST00000219084 TRAV3A0A0B4J244 114 aa3.55□□□□□ -1.84
CHD9-201ENST00000219084 Q6ZS92 163 aa3.55□□□□□ -1.84
CHD9-201ENST00000219084 VGLL1Q99990 258 aa3.55□□□□□ -1.84
CHD9-201ENST00000219084 IGHV3-66A0A0C4DH42 116 aa3.55□□□□□ -1.84
CHD9-201ENST00000219084 LINC00158P58513 81 aa3.55□□□□□ -1.84
CHD9-201ENST00000219084 LINC01356Q8N9X3 169 aa3.55□□□□□ -1.84
CHD9-201ENST00000219084 ZNF48Q96MX3 618 aaPredicted RBP3.55□□□□□ -1.84
CHD9-201ENST00000219084 PRR25Q96S07 402 aa3.55□□□□□ -1.84
CHD9-201ENST00000219084 TOMM7Q9P0U1 55 aa3.55□□□□□ -1.84
CHD9-201ENST00000219084 COLQQ9Y215 455 aaPredicted RBP3.55□□□□□ -1.84
CHD9-201ENST00000219084 LSM4Q9Y4Z0 139 aaKnown RBP3.55□□□□□ -1.84
CHD9-201ENST00000219084 HERV-K104P63124 156 aa3.55□□□□□ -1.84
CHD9-201ENST00000219084 MRPL51Q4U2R6 128 aaKnown RBP3.55□□□□□ -1.84
CHD9-201ENST00000219084 RNF138Q8WVD3 245 aa3.55□□□□□ -1.84
CHD9-201ENST00000219084 SMIM2Q9BVW6 85 aa3.55□□□□□ -1.84
CHD9-201ENST00000219084 IGHV2-70DA0A0C4DH43 119 aa3.54□□□□□ -1.84
CHD9-201ENST00000219084 F8WEM9 126 aa3.54□□□□□ -1.84
CHD9-201ENST00000219084 CD59P13987 128 aa3.54□□□□□ -1.84
CHD9-201ENST00000219084 SSC4DQ8WTU2 575 aa3.54□□□□□ -1.84
CHD9-201ENST00000219084 EREGO14944 169 aa3.54□□□□□ -1.84
CHD9-201ENST00000219084 IGKV1-16P04430 117 aa3.54□□□□□ -1.84
CHD9-201ENST00000219084 ATP1A1-AS1Q5TC04 95 aa3.54□□□□□ -1.84
CHD9-201ENST00000219084 SMIM20Q8N5G0 67 aa3.54□□□□□ -1.84
CHD9-201ENST00000219084 IGLV3-9A0A075B6K5 115 aa3.54□□□□□ -1.84
CHD9-201ENST00000219084 ARMS2P0C7Q2 107 aa3.54□□□□□ -1.84
CHD9-201ENST00000219084 MED14OSP0DP75 135 aa3.54□□□□□ -1.84
CHD9-201ENST00000219084 ZNF726P1Q15940 193 aa3.54□□□□□ -1.84
CHD9-201ENST00000219084 FAM201AQ5SY85 155 aa3.54□□□□□ -1.84
CHD9-201ENST00000219084 TMEM126AQ9H061 195 aa3.54□□□□□ -1.84
CHD9-201ENST00000219084 A0A0G2JNJ9 132 aa3.54□□□□□ -1.84
CHD9-201ENST00000219084 A0A0G2JRQ6 117 aa3.54□□□□□ -1.84
CHD9-201ENST00000219084 SIGLEC8Q9NYZ4 499 aa3.54□□□□□ -1.84
CHD9-201ENST00000219084 Q9UFV3 132 aa3.54□□□□□ -1.84
CHD9-201ENST00000219084 RNF114Q9Y508 228 aa3.54□□□□□ -1.84
CHD9-201ENST00000219084 HIVEP3Q5T1R4 2406 aa3.54□□□□□ -1.84
CHD9-201ENST00000219084 TRAV12-1A0A0B4J245 112 aa3.54□□□□□ -1.84
CHD9-201ENST00000219084 GAGE12HA6NDE8 117 aa3.54□□□□□ -1.84
CHD9-201ENST00000219084 PRR20EP86478 221 aa3.54□□□□□ -1.84
CHD9-201ENST00000219084 PRR20CP86479 221 aa3.54□□□□□ -1.84
CHD9-201ENST00000219084 PRR20DP86480 221 aa3.54□□□□□ -1.84
CHD9-201ENST00000219084 PRR20BP86481 221 aa3.54□□□□□ -1.84
CHD9-201ENST00000219084 PRR20AP86496 221 aa3.54□□□□□ -1.84
CHD9-201ENST00000219084 C17orf58Q2M2W7 97 aa3.54□□□□□ -1.84
CHD9-201ENST00000219084 C9JQL5 133 aa3.54□□□□□ -1.84
CHD9-201ENST00000219084 NCR2O95944 276 aa3.54□□□□□ -1.84
CHD9-201ENST00000219084 DEFB125Q8N687 156 aa3.54□□□□□ -1.84
CHD9-201ENST00000219084 STPG4Q8N801 248 aa3.54□□□□□ -1.84
CHD9-201ENST00000219084 CHCHD5Q9BSY4 110 aa3.54□□□□□ -1.84
CHD9-201ENST00000219084 TRBV25-1A0A075B6N4 114 aa3.53□□□□□ -1.84
CHD9-201ENST00000219084 ZNF876PQ49A33 203 aa3.53□□□□□ -1.84
CHD9-201ENST00000219084 C2orf66Q6UXQ4 117 aa3.53□□□□□ -1.84
CHD9-201ENST00000219084 VOPP1Q96AW1 172 aa3.53□□□□□ -1.84
CHD9-201ENST00000219084 UBL5Q9BZL1 73 aa3.53□□□□□ -1.84
CHD9-201ENST00000219084 GTSF1LQ9H1H1 148 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 138.8 ms