RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 K7EP13 123 aa11.81□□□□□ -0.52
EFNB1-201ENST00000204961 LY6EQ16553 131 aa11.81□□□□□ -0.52
EFNB1-201ENST00000204961 ZNF414Q96IQ9 312 aa11.81□□□□□ -0.52
EFNB1-201ENST00000204961 SHANK2-AS3Q9BTD1 123 aa11.81□□□□□ -0.52
EFNB1-201ENST00000204961 RIGQ13278 110 aa11.81□□□□□ -0.52
EFNB1-201ENST00000204961 PRSS22Q9GZN4 317 aa11.81□□□□□ -0.52
EFNB1-201ENST00000204961 ABCA2Q9BZC7 2435 aa11.81□□□□□ -0.52
EFNB1-201ENST00000204961 IGHV3-11P01762 117 aa11.81□□□□□ -0.52
EFNB1-201ENST00000204961 SMIM15Q7Z3B0 74 aa11.81□□□□□ -0.52
EFNB1-201ENST00000204961 RAB1BQ9H0U4 201 aa11.81□□□□□ -0.52
EFNB1-201ENST00000204961 JMJD1CQ15652 2540 aa11.8□□□□□ -0.52
EFNB1-201ENST00000204961 EGR2P11161 476 aaPredicted RBP11.8□□□□□ -0.52
EFNB1-201ENST00000204961 MFAP4P55083 255 aa11.8□□□□□ -0.52
EFNB1-201ENST00000204961 PSG3Q16557 428 aa11.8□□□□□ -0.52
EFNB1-201ENST00000204961 C5orf64Q2M2E5 130 aa11.8□□□□□ -0.52
EFNB1-201ENST00000204961 THYN1Q9P016 225 aa11.8□□□□□ -0.52
EFNB1-201ENST00000204961 KLF12Q9Y4X4 402 aa11.8□□□□□ -0.52
EFNB1-201ENST00000204961 C15orf32Q32M92 178 aa11.8□□□□□ -0.52
EFNB1-201ENST00000204961 FANCD2OSQ96PS1 177 aa11.8□□□□□ -0.52
EFNB1-201ENST00000204961 A0A1W2PPR1 153 aa11.8□□□□□ -0.52
EFNB1-201ENST00000204961 CRYGBP07316 175 aa11.8□□□□□ -0.52
EFNB1-201ENST00000204961 NEU4Q8WWR8 484 aaPredicted RBP11.8□□□□□ -0.52
EFNB1-201ENST00000204961 HIF1ANQ9NWT6 349 aa11.79□□□□□ -0.52
EFNB1-201ENST00000204961 KAAG1Q9UBP8 84 aa11.79□□□□□ -0.52
EFNB1-201ENST00000204961 PRSS47A8MTI9 375 aa11.79□□□□□ -0.52
EFNB1-201ENST00000204961 TMEM30BQ3MIR4 351 aa11.79□□□□□ -0.52
EFNB1-201ENST00000204961 FAM71F2Q6NXP2 309 aa11.79□□□□□ -0.52
EFNB1-201ENST00000204961 EPG5Q9HCE0 2579 aa11.79□□□□□ -0.52
EFNB1-201ENST00000204961 MTORP42345 2549 aa11.79□□□□□ -0.52
EFNB1-201ENST00000204961 AGRNO00468 2067 aa11.79□□□□□ -0.52
EFNB1-201ENST00000204961 C7orf71A4D174 169 aa11.78□□□□□ -0.52
EFNB1-201ENST00000204961 GAGE10A6NGK3 116 aa11.78□□□□□ -0.52
EFNB1-201ENST00000204961 NPYP01303 97 aa11.78□□□□□ -0.52
EFNB1-201ENST00000204961 SIGLEC8Q9NYZ4 499 aa11.78□□□□□ -0.52
EFNB1-201ENST00000204961 PRSS1P07477 247 aa11.78□□□□□ -0.52
EFNB1-201ENST00000204961 WIPF2Q8TF74 440 aaPredicted RBP11.78□□□□□ -0.52
EFNB1-201ENST00000204961 DKK2Q9UBU2 259 aa11.78□□□□□ -0.52
EFNB1-201ENST00000204961 H3BUT2 72 aa11.77□□□□□ -0.52
EFNB1-201ENST00000204961 H3BRN7 92 aa11.77□□□□□ -0.53
EFNB1-201ENST00000204961 FCER1GP30273 86 aa11.77□□□□□ -0.53
EFNB1-201ENST00000204961 C3orf36Q3SXR2 165 aa11.77□□□□□ -0.53
EFNB1-201ENST00000204961 C12orf54Q6X4T0 127 aa11.77□□□□□ -0.53
EFNB1-201ENST00000204961 IL17RELQ6ZVW7 336 aa11.77□□□□□ -0.53
EFNB1-201ENST00000204961 PCP2Q8IVA1 136 aa11.77□□□□□ -0.53
EFNB1-201ENST00000204961 VKORC1Q9BQB6 163 aa11.77□□□□□ -0.53
EFNB1-201ENST00000204961 FAM231BA6NCW3 169 aa11.76□□□□□ -0.53
EFNB1-201ENST00000204961 RHOGP84095 191 aa11.76□□□□□ -0.53
EFNB1-201ENST00000204961 KLF5Q13887 457 aaPredicted RBP11.76□□□□□ -0.53
EFNB1-201ENST00000204961 ATP5L2Q7Z4Y8 100 aa11.76□□□□□ -0.53
EFNB1-201ENST00000204961 MRPL51Q4U2R6 128 aaKnown RBP11.76□□□□□ -0.53
EFNB1-201ENST00000204961 ST20Q9HBF5 79 aa11.76□□□□□ -0.53
EFNB1-201ENST00000204961 CEACAM3P40198 252 aa11.76□□□□□ -0.53
EFNB1-201ENST00000204961 OR10AG1Q8NH19 301 aa11.76□□□□□ -0.53
EFNB1-201ENST00000204961 IGF1P05019 195 aa11.75□□□□□ -0.53
EFNB1-201ENST00000204961 DEFB125Q8N687 156 aa11.75□□□□□ -0.53
EFNB1-201ENST00000204961 ACANP16112 2415 aa11.75□□□□□ -0.53
EFNB1-201ENST00000204961 K7ERU9 68 aa11.75□□□□□ -0.53
EFNB1-201ENST00000204961 ATP6V0E1O15342 81 aa11.75□□□□□ -0.53
EFNB1-201ENST00000204961 HSPB8Q9UJY1 196 aa11.75□□□□□ -0.53
EFNB1-201ENST00000204961 JKAMPQ9P055 326 aa11.75□□□□□ -0.53
EFNB1-201ENST00000204961 RABAC1Q9UI14 185 aa11.75□□□□□ -0.53
EFNB1-201ENST00000204961 CTSGP08311 255 aa11.74□□□□□ -0.53
EFNB1-201ENST00000204961 FER1L6-AS1Q8NA97 138 aa11.74□□□□□ -0.53
EFNB1-201ENST00000204961 ADORA2A-AS1P86434 159 aa11.74□□□□□ -0.53
EFNB1-201ENST00000204961 FAM162BQ5T6X4 162 aa11.74□□□□□ -0.53
EFNB1-201ENST00000204961 ZNF747Q9BV97 191 aa11.74□□□□□ -0.53
EFNB1-201ENST00000204961 BPESC1Q9GZL8 116 aa11.74□□□□□ -0.53
EFNB1-201ENST00000204961 K7ENP7 123 aa11.73□□□□□ -0.53
EFNB1-201ENST00000204961 IGKV3-20P01619 116 aa11.73□□□□□ -0.53
EFNB1-201ENST00000204961 FBN2P35556 2912 aa11.73□□□□□ -0.53
EFNB1-201ENST00000204961 SFTA2Q6UW10 78 aa11.73□□□□□ -0.53
EFNB1-201ENST00000204961 CFHR4Q92496 578 aa11.73□□□□□ -0.53
EFNB1-201ENST00000204961 PRR25Q96S07 402 aa11.73□□□□□ -0.53
EFNB1-201ENST00000204961 TMEM238C9JI98 176 aa11.73□□□□□ -0.53
EFNB1-201ENST00000204961 RPL24P83731 157 aaKnown RBP11.73□□□□□ -0.53
EFNB1-201ENST00000204961 RASL11AQ6T310 242 aa11.73□□□□□ -0.53
EFNB1-201ENST00000204961 ORMDL3Q8N138 153 aa11.73□□□□□ -0.53
EFNB1-201ENST00000204961 ZNF492Q9P255 531 aa11.73□□□□□ -0.53
EFNB1-201ENST00000204961 SMAD5-AS1Q9Y6J3 95 aa11.73□□□□□ -0.53
EFNB1-201ENST00000204961 ZNF462Q96JM2 2506 aa11.73□□□□□ -0.53
EFNB1-201ENST00000204961 F6UB75 175 aa11.72□□□□□ -0.53
EFNB1-201ENST00000204961 M0R381 172 aa11.72□□□□□ -0.53
EFNB1-201ENST00000204961 HAX1O00165 279 aa11.72□□□□□ -0.53
EFNB1-201ENST00000204961 SAA4P35542 130 aa11.72□□□□□ -0.53
EFNB1-201ENST00000204961 MTURNQ8N3F0 131 aa11.72□□□□□ -0.53
EFNB1-201ENST00000204961 SCRT2Q9NQ03 307 aa11.72□□□□□ -0.53
EFNB1-201ENST00000204961 PEF1Q9UBV8 284 aaKnown RBP11.72□□□□□ -0.53
EFNB1-201ENST00000204961 F8W735 103 aaPredicted RBP11.72□□□□□ -0.53
EFNB1-201ENST00000204961 INS-IGF2F8WCM5 200 aa11.72□□□□□ -0.53
EFNB1-201ENST00000204961 TRGV3P03979 118 aa11.72□□□□□ -0.53
EFNB1-201ENST00000204961 LEPP41159 167 aa11.72□□□□□ -0.53
EFNB1-201ENST00000204961 GTSCR1Q86UQ5 136 aa11.72□□□□□ -0.53
EFNB1-201ENST00000204961 CSTL1Q9H114 145 aa11.72□□□□□ -0.53
EFNB1-201ENST00000204961 TMEM160Q9NX00 188 aa11.72□□□□□ -0.53
EFNB1-201ENST00000204961 KIR3DS1Q14943 382 aa11.71□□□□□ -0.53
EFNB1-201ENST00000204961 HIST2H2BDQ6DRA6 164 aa11.71□□□□□ -0.53
EFNB1-201ENST00000204961 CHCHD1Q96BP2 118 aaKnown RBP11.71□□□□□ -0.53
EFNB1-201ENST00000204961 NDFIP1Q9BT67 221 aa11.71□□□□□ -0.53
EFNB1-201ENST00000204961 ANKRD17O75179 2603 aaKnown RBP11.71□□□□□ -0.53
EFNB1-201ENST00000204961 IGHV7-81A0A0B4J1V7 117 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms