RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 TRAV41A0A0B4J266 112 aa9.53□□□□□ -0.88
CHPF2-201ENST00000035307 SH2D1AO60880 128 aa9.53□□□□□ -0.88
CHPF2-201ENST00000035307 IGLC1P0CG04 106 aa9.53□□□□□ -0.88
CHPF2-201ENST00000035307 FAM159AQ6UWV7 190 aa9.53□□□□□ -0.88
CHPF2-201ENST00000035307 FAM181BA6NEQ2 426 aa9.53□□□□□ -0.88
CHPF2-201ENST00000035307 NDUFA3O95167 84 aa9.53□□□□□ -0.88
CHPF2-201ENST00000035307 LEPP41159 167 aa9.53□□□□□ -0.88
CHPF2-201ENST00000035307 SRSF2Q01130 221 aaKnown RBP9.53□□□□□ -0.88
CHPF2-201ENST00000035307 PAX8Q06710 450 aa9.53□□□□□ -0.88
CHPF2-201ENST00000035307 BCL6BQ8N143 479 aaPredicted RBP9.53□□□□□ -0.88
CHPF2-201ENST00000035307 Q6ZVH6 145 aa9.52□□□□□ -0.88
CHPF2-201ENST00000035307 ZANQ9Y493 2812 aa9.52□□□□□ -0.89
CHPF2-201ENST00000035307 TRAV9-1A0A075B6T8 112 aa9.52□□□□□ -0.89
CHPF2-201ENST00000035307 IGKV3OR2-268A0A0C4DH90 116 aa9.52□□□□□ -0.89
CHPF2-201ENST00000035307 CR1LQ2VPA4 569 aa9.52□□□□□ -0.89
CHPF2-201ENST00000035307 YPEL4Q96NS1 127 aa9.52□□□□□ -0.89
CHPF2-201ENST00000035307 DUX3Q96PT4 197 aa9.52□□□□□ -0.89
CHPF2-201ENST00000035307 IGHV4-59P01825 116 aa9.52□□□□□ -0.89
CHPF2-201ENST00000035307 IFI27P40305 119 aaPredicted RBP9.52□□□□□ -0.89
CHPF2-201ENST00000035307 ID1P41134 155 aa9.52□□□□□ -0.89
CHPF2-201ENST00000035307 C1orf194Q5T5A4 169 aa9.52□□□□□ -0.89
CHPF2-201ENST00000035307 RAI1Q7Z5J4 1906 aaPredicted RBP9.52□□□□□ -0.89
CHPF2-201ENST00000035307 LINC01548A6NM66 108 aa9.51□□□□□ -0.89
CHPF2-201ENST00000035307 DNLZQ5SXM8 178 aa9.51□□□□□ -0.89
CHPF2-201ENST00000035307 ITPR2Q14571 2701 aa9.51□□□□□ -0.89
CHPF2-201ENST00000035307 DCHS2Q6V1P9 2916 aa9.51□□□□□ -0.89
CHPF2-201ENST00000035307 A0A087X0K7 114 aa9.51□□□□□ -0.89
CHPF2-201ENST00000035307 A8MWP6 167 aa9.51□□□□□ -0.89
CHPF2-201ENST00000035307 CD7P09564 240 aa9.51□□□□□ -0.89
CHPF2-201ENST00000035307 HOXB4P17483 251 aaPredicted RBP9.51□□□□□ -0.89
CHPF2-201ENST00000035307 VWC2Q2TAL6 325 aa9.51□□□□□ -0.89
CHPF2-201ENST00000035307 ZNF562Q6V9R5 426 aa9.51□□□□□ -0.89
CHPF2-201ENST00000035307 OR1N2Q8NGR9 330 aa9.51□□□□□ -0.89
CHPF2-201ENST00000035307 SHANK2-AS3Q9BTD1 123 aa9.51□□□□□ -0.89
CHPF2-201ENST00000035307 SNHG12Q9BXW3 62 aa9.51□□□□□ -0.89
CHPF2-201ENST00000035307 TRAV9-2A0A087WT02 112 aa9.5□□□□□ -0.89
CHPF2-201ENST00000035307 M0R1W7 72 aa9.5□□□□□ -0.89
CHPF2-201ENST00000035307 OVOL3O00110 214 aa9.5□□□□□ -0.89
CHPF2-201ENST00000035307 FCN3O75636 299 aa9.5□□□□□ -0.89
CHPF2-201ENST00000035307 CGB3P0DN86 165 aa9.5□□□□□ -0.89
CHPF2-201ENST00000035307 CGB7P0DN87 165 aa9.5□□□□□ -0.89
CHPF2-201ENST00000035307 LOC107984156A0A0G2JMH3 177 aa9.5□□□□□ -0.89
CHPF2-201ENST00000035307 EMP1P54849 157 aa9.5□□□□□ -0.89
CHPF2-201ENST00000035307 DEFB1P60022 68 aa9.5□□□□□ -0.89
CHPF2-201ENST00000035307 PSG3Q16557 428 aa9.5□□□□□ -0.89
CHPF2-201ENST00000035307 TMEM249Q2WGJ8 235 aa9.5□□□□□ -0.89
CHPF2-201ENST00000035307 ARL17AQ8IVW1 177 aa9.5□□□□□ -0.89
CHPF2-201ENST00000035307 IGHV1-69DA0A0B4J2H0 117 aa9.5□□□□□ -0.89
CHPF2-201ENST00000035307 CENPVL3A0A0U1RRI6 287 aa9.5□□□□□ -0.89
CHPF2-201ENST00000035307 GAGE10A6NGK3 116 aa9.5□□□□□ -0.89
CHPF2-201ENST00000035307 IGHV1-69P01742 117 aa9.5□□□□□ -0.89
CHPF2-201ENST00000035307 POU2AF1Q16633 256 aa9.5□□□□□ -0.89
CHPF2-201ENST00000035307 OR10J3Q5JRS4 329 aa9.5□□□□□ -0.89
CHPF2-201ENST00000035307 STPG4Q8N801 248 aa9.5□□□□□ -0.89
CHPF2-201ENST00000035307 JMJD8Q96S16 334 aa9.5□□□□□ -0.89
CHPF2-201ENST00000035307 VGLL1Q99990 258 aa9.5□□□□□ -0.89
CHPF2-201ENST00000035307 IGHV3-73A0A0B4J1V6 119 aa9.49□□□□□ -0.89
CHPF2-201ENST00000035307 TOMM40O96008 361 aa9.49□□□□□ -0.89
CHPF2-201ENST00000035307 PRSS2P07478 247 aa9.49□□□□□ -0.89
CHPF2-201ENST00000035307 RPS20P60866 119 aaKnown RBP9.49□□□□□ -0.89
CHPF2-201ENST00000035307 MPV17L2Q567V2 206 aa9.49□□□□□ -0.89
CHPF2-201ENST00000035307 DTX2Q86UW9 622 aa9.49□□□□□ -0.89
CHPF2-201ENST00000035307 ZC2HC1AQ96GY0 325 aa9.49□□□□□ -0.89
CHPF2-201ENST00000035307 HIST1H4GQ99525 98 aa9.49□□□□□ -0.89
CHPF2-201ENST00000035307 MAST4O15021 2626 aa9.49□□□□□ -0.89
CHPF2-201ENST00000035307 P0C879 139 aa9.49□□□□□ -0.89
CHPF2-201ENST00000035307 UBE2E1P51965 193 aa9.49□□□□□ -0.89
CHPF2-201ENST00000035307 LMO4P61968 165 aa9.49□□□□□ -0.89
CHPF2-201ENST00000035307 DEFB112Q30KQ8 113 aa9.49□□□□□ -0.89
CHPF2-201ENST00000035307 PSMG4Q5JS54 123 aa9.49□□□□□ -0.89
CHPF2-201ENST00000035307 GTF2H5Q6ZYL4 71 aa9.49□□□□□ -0.89
CHPF2-201ENST00000035307 WFDC11Q8NEX6 87 aa9.49□□□□□ -0.89
CHPF2-201ENST00000035307 C2orf88Q9BSF0 95 aa9.49□□□□□ -0.89
CHPF2-201ENST00000035307 TRBV19A0A075B6N1 114 aa9.49□□□□□ -0.89
CHPF2-201ENST00000035307 PSMB11A5LHX3 300 aa9.49□□□□□ -0.89
CHPF2-201ENST00000035307 IGKV1-17P01599 117 aa9.49□□□□□ -0.89
CHPF2-201ENST00000035307 C12orf54Q6X4T0 127 aa9.49□□□□□ -0.89
CHPF2-201ENST00000035307 PIP4P2Q8N4L2 257 aa9.49□□□□□ -0.89
CHPF2-201ENST00000035307 BEND2Q8NDZ0 799 aa9.49□□□□□ -0.89
CHPF2-201ENST00000035307 A6NDN8 102 aa9.48□□□□□ -0.89
CHPF2-201ENST00000035307 TMEM170BQ5T4T1 132 aa9.48□□□□□ -0.89
CHPF2-201ENST00000035307 SIGLEC15Q6ZMC9 328 aa9.48□□□□□ -0.89
CHPF2-201ENST00000035307 NPFFR1Q9GZQ6 430 aa9.48□□□□□ -0.89
CHPF2-201ENST00000035307 TYMSP04818 313 aa9.48□□□□□ -0.89
CHPF2-201ENST00000035307 ASIPP42127 132 aa9.48□□□□□ -0.89
CHPF2-201ENST00000035307 LDLRAD2Q5SZI1 272 aa9.48□□□□□ -0.89
CHPF2-201ENST00000035307 C14orf178Q8N769 122 aaPredicted RBP9.48□□□□□ -0.89
CHPF2-201ENST00000035307 ZNF491Q8N8L2 437 aa9.48□□□□□ -0.89
CHPF2-201ENST00000035307 C10orf105Q8TEF2 133 aa9.48□□□□□ -0.89
CHPF2-201ENST00000035307 LINC00477Q96M19 166 aa9.48□□□□□ -0.89
CHPF2-201ENST00000035307 TRAV26-2A0A0B4J265 109 aa9.48□□□□□ -0.89
CHPF2-201ENST00000035307 IGLV1-47P01700 117 aa9.48□□□□□ -0.89
CHPF2-201ENST00000035307 TSPOP30536 169 aa9.48□□□□□ -0.89
CHPF2-201ENST00000035307 C1orf122Q6ZSJ8 110 aa9.48□□□□□ -0.89
CHPF2-201ENST00000035307 LINC00173Q6ZV60 143 aa9.48□□□□□ -0.89
CHPF2-201ENST00000035307 LINC01356Q8N9X3 169 aa9.48□□□□□ -0.89
CHPF2-201ENST00000035307 IGHV3-64A0A075B6Q5 118 aa9.47□□□□□ -0.89
CHPF2-201ENST00000035307 IGKV3D-20A0A0C4DH25 116 aa9.47□□□□□ -0.89
CHPF2-201ENST00000035307 F6UB75 175 aa9.47□□□□□ -0.89
CHPF2-201ENST00000035307 PSMB2P49721 201 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms