RNA–Protein interactions for RNA: ENST00000023897.10

GABRA1-201, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRA1, Length 2,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-201ENST00000023897 NPFFR1Q9GZQ6 430 aa11.32□□□□□ -0.6
GABRA1-201ENST00000023897 MUC21A0A0G2JKD1 596 aa11.32□□□□□ -0.6
GABRA1-201ENST00000023897 MUC21A0A140T8X8 626 aa11.32□□□□□ -0.6
GABRA1-201ENST00000023897 TCF21O43680 179 aa11.32□□□□□ -0.6
GABRA1-201ENST00000023897 NPYP01303 97 aa11.32□□□□□ -0.6
GABRA1-201ENST00000023897 PAX8Q06710 450 aa11.32□□□□□ -0.6
GABRA1-201ENST00000023897 ERCC8Q13216 396 aa11.32□□□□□ -0.6
GABRA1-201ENST00000023897 MUC21Q5SSG8 566 aa11.32□□□□□ -0.6
GABRA1-201ENST00000023897 BVES-AS1Q5T3Y7 98 aa11.32□□□□□ -0.6
GABRA1-201ENST00000023897 CLEC19AQ6UXS0 136 aa11.32□□□□□ -0.6
GABRA1-201ENST00000023897 ZNF575Q86XF7 245 aa11.32□□□□□ -0.6
GABRA1-201ENST00000023897 METTL26Q96S19 204 aa11.32□□□□□ -0.6
GABRA1-201ENST00000023897 ATP6V0BQ99437 205 aa11.32□□□□□ -0.6
GABRA1-201ENST00000023897 BPESC1Q9GZL8 116 aa11.32□□□□□ -0.6
GABRA1-201ENST00000023897 DCHS2Q6V1P9 2916 aa11.31□□□□□ -0.6
GABRA1-201ENST00000023897 PRAC2D3DTV9 90 aa11.31□□□□□ -0.6
GABRA1-201ENST00000023897 NUDT3O95989 172 aa11.31□□□□□ -0.6
GABRA1-201ENST00000023897 C5orf56Q8N8D9 126 aa11.31□□□□□ -0.6
GABRA1-201ENST00000023897 LRBAP50851 2863 aa11.31□□□□□ -0.6
GABRA1-201ENST00000023897 G3V318 75 aa11.31□□□□□ -0.6
GABRA1-201ENST00000023897 PTTG1IPP53801 180 aa11.31□□□□□ -0.6
GABRA1-201ENST00000023897 UBE2V1Q13404 147 aa11.31□□□□□ -0.6
GABRA1-201ENST00000023897 OR1N2Q8NGR9 330 aa11.31□□□□□ -0.6
GABRA1-201ENST00000023897 MAP1LC3AQ9H492 121 aa11.31□□□□□ -0.6
GABRA1-201ENST00000023897 HIF1ANQ9NWT6 349 aa11.31□□□□□ -0.6
GABRA1-201ENST00000023897 PPP1R14DQ9NXH3 145 aa11.31□□□□□ -0.6
GABRA1-201ENST00000023897 LINC01546A6NGU7 62 aa11.3□□□□□ -0.6
GABRA1-201ENST00000023897 SFTPCP11686 197 aa11.3□□□□□ -0.6
GABRA1-201ENST00000023897 IL17RELQ6ZVW7 336 aa11.3□□□□□ -0.6
GABRA1-201ENST00000023897 PIP4P2Q8N4L2 257 aa11.3□□□□□ -0.6
GABRA1-201ENST00000023897 RNF182Q8N6D2 247 aa11.3□□□□□ -0.6
GABRA1-201ENST00000023897 RNF185Q96GF1 192 aa11.3□□□□□ -0.6
GABRA1-201ENST00000023897 SMKR1H3BMG3 65 aa11.29□□□□□ -0.6
GABRA1-201ENST00000023897 U3KQE9 123 aa11.29□□□□□ -0.6
GABRA1-201ENST00000023897 NHLH1Q02575 133 aa11.29□□□□□ -0.6
GABRA1-201ENST00000023897 ATP5G2Q06055 141 aa11.29□□□□□ -0.6
GABRA1-201ENST00000023897 Q6ZVH6 145 aa11.29□□□□□ -0.6
GABRA1-201ENST00000023897 IFI27L1Q96BM0 104 aa11.29□□□□□ -0.6
GABRA1-201ENST00000023897 MOB4Q9Y3A3 225 aa11.29□□□□□ -0.6
GABRA1-201ENST00000023897 TRAV8-2A0A0B4J237 113 aa11.28□□□□□ -0.6
GABRA1-201ENST00000023897 LINC01548A6NM66 108 aa11.28□□□□□ -0.6
GABRA1-201ENST00000023897 CCL25O15444 150 aa11.28□□□□□ -0.6
GABRA1-201ENST00000023897 TMEM78Q5T7P6 136 aa11.28□□□□□ -0.6
GABRA1-201ENST00000023897 DEFB125Q8N687 156 aa11.28□□□□□ -0.6
GABRA1-201ENST00000023897 ITLN2Q8WWU7 325 aaPredicted RBP11.28□□□□□ -0.6
GABRA1-201ENST00000023897 COL25A1Q9BXS0 654 aaPredicted RBP11.28□□□□□ -0.6
GABRA1-201ENST00000023897 IGHV3-66A0A0C4DH42 116 aa11.28□□□□□ -0.6
GABRA1-201ENST00000023897 FAM223BA6NKX1 122 aa11.28□□□□□ -0.6
GABRA1-201ENST00000023897 CRIP2P52943 208 aaPredicted RBP11.28□□□□□ -0.6
GABRA1-201ENST00000023897 CACNG7P62955 275 aa11.28□□□□□ -0.6
GABRA1-201ENST00000023897 C8orf86Q6ZUL3 223 aa11.28□□□□□ -0.6
GABRA1-201ENST00000023897 FAM223AQ8IWN6 122 aa11.28□□□□□ -0.6
GABRA1-201ENST00000023897 AGPAT4-IT1Q9H0P7 198 aa11.28□□□□□ -0.6
GABRA1-201ENST00000023897 MSRB1Q9NZV6 116 aa11.28□□□□□ -0.6
GABRA1-201ENST00000023897 IGF2RP11717 2491 aa11.28□□□□□ -0.6
GABRA1-201ENST00000023897 HIVEP3Q5T1R4 2406 aa11.28□□□□□ -0.6
GABRA1-201ENST00000023897 TACC2O95359 2948 aa11.27□□□□□ -0.61
GABRA1-201ENST00000023897 DCHS1Q96JQ0 3298 aa11.27□□□□□ -0.61
GABRA1-201ENST00000023897 TRAV41A0A0B4J266 112 aa11.27□□□□□ -0.61
GABRA1-201ENST00000023897 TAX1BP3O14907 124 aa11.27□□□□□ -0.61
GABRA1-201ENST00000023897 C19orf54Q5BKX5 351 aa11.27□□□□□ -0.61
GABRA1-201ENST00000023897 PRSS57Q6UWY2 283 aa11.27□□□□□ -0.61
GABRA1-201ENST00000023897 C9orf47Q6ZRZ4 202 aa11.27□□□□□ -0.61
GABRA1-201ENST00000023897 C2orf91Q6ZV80 131 aa11.27□□□□□ -0.61
GABRA1-201ENST00000023897 NXT2Q9NPJ8 142 aaKnown RBP11.27□□□□□ -0.61
GABRA1-201ENST00000023897 COL6A6A6NMZ7 2263 aa11.26□□□□□ -0.61
GABRA1-201ENST00000023897 IGKV3D-20A0A0C4DH25 116 aa11.26□□□□□ -0.61
GABRA1-201ENST00000023897 CD5LO43866 347 aa11.26□□□□□ -0.61
GABRA1-201ENST00000023897 FGF6P10767 208 aa11.26□□□□□ -0.61
GABRA1-201ENST00000023897 LY6DQ14210 128 aa11.26□□□□□ -0.61
GABRA1-201ENST00000023897 ANKRD39Q53RE8 183 aa11.26□□□□□ -0.61
GABRA1-201ENST00000023897 NBASA2RRP1 2371 aa11.25□□□□□ -0.61
GABRA1-201ENST00000023897 TNFRSF6BO95407 300 aa11.25□□□□□ -0.61
GABRA1-201ENST00000023897 IGHV3OR16-13A0A075B7E8 117 aa11.24□□□□□ -0.61
GABRA1-201ENST00000023897 IGHV3-74A0A0B4J1X5 117 aa11.24□□□□□ -0.61
GABRA1-201ENST00000023897 FCER1GP30273 86 aa11.24□□□□□ -0.61
GABRA1-201ENST00000023897 FXYD7P58549 80 aa11.24□□□□□ -0.61
GABRA1-201ENST00000023897 C9orf139Q6ZV77 190 aa11.24□□□□□ -0.61
GABRA1-201ENST00000023897 IGHV1-69DA0A0B4J2H0 117 aa11.24□□□□□ -0.61
GABRA1-201ENST00000023897 ZNF207O43670 478 aaKnown RBP11.24□□□□□ -0.61
GABRA1-201ENST00000023897 IGHV1-69P01742 117 aa11.24□□□□□ -0.61
GABRA1-201ENST00000023897 IGHV4-39P01824 125 aa11.24□□□□□ -0.61
GABRA1-201ENST00000023897 VAMP3Q15836 100 aa11.24□□□□□ -0.61
GABRA1-201ENST00000023897 TMEM219Q86XT9 240 aa11.24□□□□□ -0.61
GABRA1-201ENST00000023897 BOD1L2Q8IYS8 172 aa11.24□□□□□ -0.61
GABRA1-201ENST00000023897 SPTBN1Q01082 2364 aaKnown RBP11.24□□□□□ -0.61
GABRA1-201ENST00000023897 ATRXP46100 2492 aa11.23□□□□□ -0.61
GABRA1-201ENST00000023897 IGHV3-49A0A0A0MS15 119 aa11.23□□□□□ -0.61
GABRA1-201ENST00000023897 C19orf84I3L1E1 186 aa11.23□□□□□ -0.61
GABRA1-201ENST00000023897 SEC11AP67812 179 aa11.23□□□□□ -0.61
GABRA1-201ENST00000023897 PSMG4Q5JS54 123 aa11.23□□□□□ -0.61
GABRA1-201ENST00000023897 SMIM15Q7Z3B0 74 aa11.23□□□□□ -0.61
GABRA1-201ENST00000023897 GLMPQ8WWB7 406 aa11.23□□□□□ -0.61
GABRA1-201ENST00000023897 C11orf21Q9P2W6 132 aa11.23□□□□□ -0.61
GABRA1-201ENST00000023897 LENEPQ9Y5L5 61 aa11.23□□□□□ -0.61
GABRA1-201ENST00000023897 TRGV3P03979 118 aa11.23□□□□□ -0.61
GABRA1-201ENST00000023897 PPIFP30405 207 aaKnown RBP11.23□□□□□ -0.61
GABRA1-201ENST00000023897 ARL3P36405 182 aa11.23□□□□□ -0.61
GABRA1-201ENST00000023897 Q8N8P6 123 aa11.23□□□□□ -0.61
GABRA1-201ENST00000023897 OR9G4Q8NGQ1 327 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms