RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 ZNF256Q9Y2P7 627 aaPredicted RBP13.08□□□□□ -0.32
PHGDH-230ENST00000641927 MEF2BQ02080 365 aaPredicted RBP13.07□□□□□ -0.32
PHGDH-230ENST00000641927 EIF4E3Q8N5X7 224 aaKnown RBP13.07□□□□□ -0.32
PHGDH-230ENST00000641927 ZNF705FA8MVS1 300 aaPredicted RBP13.06□□□□□ -0.32
PHGDH-230ENST00000641927 CSN1S1P47710 185 aa13.06□□□□□ -0.32
PHGDH-230ENST00000641927 GNG5P63218 68 aa13.06□□□□□ -0.32
PHGDH-230ENST00000641927 PSG3Q16557 428 aa13.06□□□□□ -0.32
PHGDH-230ENST00000641927 CLEC5AQ9NY25 188 aa13.06□□□□□ -0.32
PHGDH-230ENST00000641927 RAB19A4D1S5 217 aa13.05□□□□□ -0.32
PHGDH-230ENST00000641927 ZNF506Q5JVG8 444 aa13.05□□□□□ -0.32
PHGDH-230ENST00000641927 C5orf17Q8NAS9 161 aa13.05□□□□□ -0.32
PHGDH-230ENST00000641927 PRELID1Q9Y255 219 aa13.05□□□□□ -0.32
PHGDH-230ENST00000641927 PKD1L1Q8TDX9 2849 aa13.05□□□□□ -0.32
PHGDH-230ENST00000641927 WIPF1O43516 503 aa13.05□□□□□ -0.32
PHGDH-230ENST00000641927 DEFB131AP59861 70 aa13.05□□□□□ -0.32
PHGDH-230ENST00000641927 RPUSD4Q96CM3 377 aaKnown RBP13.05□□□□□ -0.32
PHGDH-230ENST00000641927 TXNDC17Q9BRA2 123 aa13.05□□□□□ -0.32
PHGDH-230ENST00000641927 CMYA5Q8N3K9 4069 aa13.05□□□□□ -0.32
PHGDH-230ENST00000641927 CD81P60033 236 aa13.04□□□□□ -0.32
PHGDH-230ENST00000641927 SRSF3P84103 164 aaKnown RBP13.04□□□□□ -0.32
PHGDH-230ENST00000641927 PEA15Q15121 130 aa13.04□□□□□ -0.32
PHGDH-230ENST00000641927 BEAN1Q3B7T3 259 aa13.04□□□□□ -0.32
PHGDH-230ENST00000641927 GTSCR1Q86UQ5 136 aa13.04□□□□□ -0.32
PHGDH-230ENST00000641927 CCDC28AQ8IWP9 274 aa13.04□□□□□ -0.32
PHGDH-230ENST00000641927 MAP6D1Q9H9H5 199 aa13.04□□□□□ -0.32
PHGDH-230ENST00000641927 EPDR1Q9UM22 224 aa13.04□□□□□ -0.32
PHGDH-230ENST00000641927 G3V4G9 280 aa13.03□□□□□ -0.32
PHGDH-230ENST00000641927 CD7P09564 240 aa13.03□□□□□ -0.32
PHGDH-230ENST00000641927 CEBPGP53567 150 aa13.03□□□□□ -0.32
PHGDH-230ENST00000641927 DEFB1P60022 68 aa13.03□□□□□ -0.32
PHGDH-230ENST00000641927 MRPL53Q96EL3 112 aaKnown RBP13.03□□□□□ -0.32
PHGDH-230ENST00000641927 TREM1Q9NP99 234 aa13.03□□□□□ -0.32
PHGDH-230ENST00000641927 SCO2A0A1W2PP80 73 aa13.02□□□□□ -0.32
PHGDH-230ENST00000641927 OR11H12B2RN74 326 aa13.02□□□□□ -0.32
PHGDH-230ENST00000641927 PRAC2D3DTV9 90 aa13.02□□□□□ -0.32
PHGDH-230ENST00000641927 F6UZH7 168 aa13.02□□□□□ -0.32
PHGDH-230ENST00000641927 PDE6DO43924 150 aa13.02□□□□□ -0.32
PHGDH-230ENST00000641927 UQCC3Q6UW78 93 aa13.02□□□□□ -0.32
PHGDH-230ENST00000641927 GOLT1AQ6ZVE7 132 aa13.02□□□□□ -0.32
PHGDH-230ENST00000641927 IGKV2-40A0A087WW87 121 aaPredicted RBP13.02□□□□□ -0.33
PHGDH-230ENST00000641927 DIRC3C9JPN6 131 aa13.02□□□□□ -0.33
PHGDH-230ENST00000641927 F6UB75 175 aa13.02□□□□□ -0.33
PHGDH-230ENST00000641927 PEX7O00628 323 aa13.02□□□□□ -0.33
PHGDH-230ENST00000641927 IGKV2D-40P01614 121 aaPredicted RBP13.02□□□□□ -0.33
PHGDH-230ENST00000641927 TCRAP04437 139 aa13.02□□□□□ -0.33
PHGDH-230ENST00000641927 ODF3L2Q3SX64 289 aa13.02□□□□□ -0.33
PHGDH-230ENST00000641927 APRG1Q8IVJ8 170 aa13.02□□□□□ -0.33
PHGDH-230ENST00000641927 TCEAL7Q9BRU2 100 aa13.02□□□□□ -0.33
PHGDH-230ENST00000641927 ATG101Q9BSB4 218 aa13.02□□□□□ -0.33
PHGDH-230ENST00000641927 ZNF705DP0CH99 300 aaPredicted RBP13.01□□□□□ -0.33
PHGDH-230ENST00000641927 ZNF705BP0CI00 300 aaPredicted RBP13.01□□□□□ -0.33
PHGDH-230ENST00000641927 CMC4P56277 68 aaPredicted RBP13.01□□□□□ -0.33
PHGDH-230ENST00000641927 ZNF124Q15973 351 aa13.01□□□□□ -0.33
PHGDH-230ENST00000641927 HIST1H2BAQ96A08 127 aa13.01□□□□□ -0.33
PHGDH-230ENST00000641927 SORL1Q92673 2214 aa13□□□□□ -0.33
PHGDH-230ENST00000641927 K7EQM0 130 aa13□□□□□ -0.33
PHGDH-230ENST00000641927 HIST1H1AQ02539 215 aaPredicted RBP13□□□□□ -0.33
PHGDH-230ENST00000641927 EBLN2Q6P2I7 272 aa13□□□□□ -0.33
PHGDH-230ENST00000641927 CYB561D1Q8N8Q1 229 aa13□□□□□ -0.33
PHGDH-230ENST00000641927 AKR1C3P42330 323 aa12.99□□□□□ -0.33
PHGDH-230ENST00000641927 ACTL10Q5JWF8 245 aa12.99□□□□□ -0.33
PHGDH-230ENST00000641927 SAMD5Q5TGI4 173 aa12.99□□□□□ -0.33
PHGDH-230ENST00000641927 OR10J6PQ8NGY7 276 aa12.99□□□□□ -0.33
PHGDH-230ENST00000641927 SGK494Q96LW2 274 aa12.99□□□□□ -0.33
PHGDH-230ENST00000641927 LINC00479Q96M42 142 aa12.99□□□□□ -0.33
PHGDH-230ENST00000641927 PRR25Q96S07 402 aa12.99□□□□□ -0.33
PHGDH-230ENST00000641927 ZMAT5Q9UDW3 170 aaKnown RBP12.99□□□□□ -0.33
PHGDH-230ENST00000641927 KNCNA6PVL3 124 aa12.99□□□□□ -0.33
PHGDH-230ENST00000641927 C9JQL5 133 aa12.99□□□□□ -0.33
PHGDH-230ENST00000641927 GDF5OSQ5U4N7 250 aa12.99□□□□□ -0.33
PHGDH-230ENST00000641927 OR8A1Q8NGG7 326 aa12.99□□□□□ -0.33
PHGDH-230ENST00000641927 WFDC10AQ9H1F0 79 aa12.99□□□□□ -0.33
PHGDH-230ENST00000641927 SMDT1Q9H4I9 107 aa12.99□□□□□ -0.33
PHGDH-230ENST00000641927 TRAV8-1A0A0A6YYK1 113 aa12.98□□□□□ -0.33
PHGDH-230ENST00000641927 TRAV34A0A0B4J273 112 aa12.98□□□□□ -0.33
PHGDH-230ENST00000641927 SRP19P09132 144 aaKnown RBP12.98□□□□□ -0.33
PHGDH-230ENST00000641927 CNN1P51911 297 aaKnown RBP12.98□□□□□ -0.33
PHGDH-230ENST00000641927 KRTAP10-11P60412 298 aa12.98□□□□□ -0.33
PHGDH-230ENST00000641927 EGFEM1PQ0D2K5 195 aa12.98□□□□□ -0.33
PHGDH-230ENST00000641927 ERCC8Q13216 396 aa12.98□□□□□ -0.33
PHGDH-230ENST00000641927 ZNF674Q2M3X9 581 aa12.98□□□□□ -0.33
PHGDH-230ENST00000641927 FOXI2Q6ZQN5 318 aa12.98□□□□□ -0.33
PHGDH-230ENST00000641927 ARL6IP6Q8N6S5 226 aa12.98□□□□□ -0.33
PHGDH-230ENST00000641927 SAV1Q9H4B6 383 aaPredicted RBP12.98□□□□□ -0.33
PHGDH-230ENST00000641927 DNHD1Q96M86 4753 aa12.97□□□□□ -0.33
PHGDH-230ENST00000641927 SERTM2A0A1B0GWG4 89 aa12.97□□□□□ -0.33
PHGDH-230ENST00000641927 TMEM250H0YL14 139 aa12.97□□□□□ -0.33
PHGDH-230ENST00000641927 IGKV3-20P01619 116 aa12.97□□□□□ -0.33
PHGDH-230ENST00000641927 UBE2G1P62253 170 aa12.97□□□□□ -0.33
PHGDH-230ENST00000641927 OR4B1Q8NGF8 309 aa12.97□□□□□ -0.33
PHGDH-230ENST00000641927 C11orf52Q96A22 123 aa12.97□□□□□ -0.33
PHGDH-230ENST00000641927 VGLL1Q99990 258 aa12.97□□□□□ -0.33
PHGDH-230ENST00000641927 DERL1Q9BUN8 251 aa12.97□□□□□ -0.33
PHGDH-230ENST00000641927 SLC35B3Q9H1N7 401 aa12.97□□□□□ -0.33
PHGDH-230ENST00000641927 A0A0J9YX75 114 aa12.96□□□□□ -0.33
PHGDH-230ENST00000641927 KRBOX1C9JBD0 128 aa12.96□□□□□ -0.33
PHGDH-230ENST00000641927 TMEM78Q5T7P6 136 aa12.96□□□□□ -0.33
PHGDH-230ENST00000641927 C2CD4CQ8TF44 421 aa12.96□□□□□ -0.33
PHGDH-230ENST00000641927 FAM110AQ9BQ89 295 aa12.96□□□□□ -0.33
PHGDH-230ENST00000641927 RBAKDNA6NC62 111 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms