RNA–Protein interactions for RNA: ENST00000641756.1

PHGDH-226, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,132 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-226ENST00000641756 FAM223AQ8IWN6 122 aa13.79□□□□□ -0.2
PHGDH-226ENST00000641756 SAMD10Q9BYL1 202 aa13.79□□□□□ -0.2
PHGDH-226ENST00000641756 IGF1P05019 195 aa13.78□□□□□ -0.2
PHGDH-226ENST00000641756 PAFAH1B2P68402 229 aa13.78□□□□□ -0.2
PHGDH-226ENST00000641756 LINC01356Q8N9X3 169 aa13.78□□□□□ -0.2
PHGDH-226ENST00000641756 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.78□□□□□ -0.21e-7■■□□□ 12.3
PHGDH-226ENST00000641756 A0A096LNT2 108 aa13.78□□□□□ -0.2
PHGDH-226ENST00000641756 SCGB1D1O95968 90 aa13.78□□□□□ -0.2
PHGDH-226ENST00000641756 IGHG2P01859 326 aa13.78□□□□□ -0.2
PHGDH-226ENST00000641756 KRTAP10-9P60411 292 aa13.78□□□□□ -0.2
PHGDH-226ENST00000641756 RELQ04864 619 aaPredicted RBP13.78□□□□□ -0.2
PHGDH-226ENST00000641756 Q6ZWC4 215 aa13.78□□□□□ -0.2
PHGDH-226ENST00000641756 Q8TAT8 98 aa13.78□□□□□ -0.2
PHGDH-226ENST00000641756 VGLL1Q99990 258 aa13.78□□□□□ -0.2
PHGDH-226ENST00000641756 SERTM2A0A1B0GWG4 89 aa13.77□□□□□ -0.21
PHGDH-226ENST00000641756 UBR5O95071 2799 aaPredicted RBP13.77□□□□□ -0.21
PHGDH-226ENST00000641756 TRBV12-3P01733 135 aa13.77□□□□□ -0.21
PHGDH-226ENST00000641756 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.77□□□□□ -0.21
PHGDH-226ENST00000641756 RNF182Q8N6D2 247 aa13.77□□□□□ -0.21
PHGDH-226ENST00000641756 C18orf32Q8TCD1 76 aa13.77□□□□□ -0.21
PHGDH-226ENST00000641756 METTL26Q96S19 204 aa13.77□□□□□ -0.21
PHGDH-226ENST00000641756 LRRK2Q5S007 2527 aa13.77□□□□□ -0.21
PHGDH-226ENST00000641756 CT45A10P0DMU9 189 aa13.76□□□□□ -0.21
PHGDH-226ENST00000641756 RAB9AP51151 201 aa13.76□□□□□ -0.21
PHGDH-226ENST00000641756 ANKRD17O75179 2603 aaKnown RBP13.76□□□□□ -0.21
PHGDH-226ENST00000641756 POLQO75417 2590 aa13.76□□□□□ -0.21
PHGDH-226ENST00000641756 FAM231BA6NCW3 169 aa13.76□□□□□ -0.21
PHGDH-226ENST00000641756 GATA3P23771 443 aa13.76□□□□□ -0.21
PHGDH-226ENST00000641756 PPIFP30405 207 aaKnown RBP13.76□□□□□ -0.21
PHGDH-226ENST00000641756 ARL3P36405 182 aa13.76□□□□□ -0.21
PHGDH-226ENST00000641756 LCN12Q6JVE5 192 aa13.76□□□□□ -0.21
PHGDH-226ENST00000641756 LCNL1Q6ZST4 164 aa13.76□□□□□ -0.21
PHGDH-226ENST00000641756 KCNS1Q96KK3 526 aa13.76□□□□□ -0.21
PHGDH-226ENST00000641756 A0A087X0K7 114 aa13.75□□□□□ -0.21
PHGDH-226ENST00000641756 A0A1W2PS18 150 aa13.75□□□□□ -0.21
PHGDH-226ENST00000641756 IGHV3-11P01762 117 aa13.75□□□□□ -0.21
PHGDH-226ENST00000641756 PMCHP20382 165 aa13.75□□□□□ -0.21
PHGDH-226ENST00000641756 CTAG1AP78358 180 aa13.75□□□□□ -0.21
PHGDH-226ENST00000641756 KLK15Q9H2R5 256 aa13.75□□□□□ -0.21
PHGDH-226ENST00000641756 PRAC2D3DTV9 90 aa13.75□□□□□ -0.21
PHGDH-226ENST00000641756 M0QZK8 103 aa13.75□□□□□ -0.21
PHGDH-226ENST00000641756 TGFAP01135 160 aa13.75□□□□□ -0.21
PHGDH-226ENST00000641756 PRR25Q96S07 402 aa13.75□□□□□ -0.21
PHGDH-226ENST00000641756 ALKBH7Q9BT30 221 aaPredicted RBP13.75□□□□□ -0.21
PHGDH-226ENST00000641756 TMSB15BA0A087X1C1 80 aa13.74□□□□□ -0.21
PHGDH-226ENST00000641756 A8MWP6 167 aa13.74□□□□□ -0.21
PHGDH-226ENST00000641756 SH2D1AO60880 128 aa13.74□□□□□ -0.21
PHGDH-226ENST00000641756 GPX1P07203 203 aa13.74□□□□□ -0.21
PHGDH-226ENST00000641756 PF4V1P10720 104 aa13.74□□□□□ -0.21
PHGDH-226ENST00000641756 PKIAP61925 76 aa13.74□□□□□ -0.21
PHGDH-226ENST00000641756 ERCC8Q13216 396 aa13.74□□□□□ -0.21
PHGDH-226ENST00000641756 DEFB112Q30KQ8 113 aa13.74□□□□□ -0.21
PHGDH-226ENST00000641756 SIGLECL1Q8N7X8 197 aa13.74□□□□□ -0.21
PHGDH-226ENST00000641756 TPPP3Q9BW30 176 aa13.74□□□□□ -0.21
PHGDH-226ENST00000641756 CSPG4Q6UVK1 2322 aa13.74□□□□□ -0.21
PHGDH-226ENST00000641756 RNF223E7ERA6 249 aa13.73□□□□□ -0.21
PHGDH-226ENST00000641756 AMTP48728 403 aa13.73□□□□□ -0.21
PHGDH-226ENST00000641756 ZNF664Q8N3J9 261 aa13.73□□□□□ -0.21
PHGDH-226ENST00000641756 ARL6IP6Q8N6S5 226 aa13.73□□□□□ -0.21
PHGDH-226ENST00000641756 NAGKQ9UJ70 344 aa13.73□□□□□ -0.21
PHGDH-226ENST00000641756 IGHV4-59P01825 116 aa13.73□□□□□ -0.21
PHGDH-226ENST00000641756 ARMS2P0C7Q2 107 aa13.73□□□□□ -0.21
PHGDH-226ENST00000641756 FOXA3P55318 350 aaPredicted RBP13.73□□□□□ -0.21
PHGDH-226ENST00000641756 UNQ9165/PRO28630Q6UXU0 137 aa13.73□□□□□ -0.21
PHGDH-226ENST00000641756 RNF114Q9Y508 228 aa13.73□□□□□ -0.21
PHGDH-226ENST00000641756 EPG5Q9HCE0 2579 aa13.73□□□□□ -0.21
PHGDH-226ENST00000641756 HAX1O00165 279 aa13.72□□□□□ -0.21
PHGDH-226ENST00000641756 TMEM95Q3KNT9 176 aa13.72□□□□□ -0.21
PHGDH-226ENST00000641756 SAPCD1Q5SSQ6 148 aa13.72□□□□□ -0.21
PHGDH-226ENST00000641756 C1orf194Q5T5A4 169 aa13.72□□□□□ -0.21
PHGDH-226ENST00000641756 FAM19A2Q8N3H0 131 aa13.72□□□□□ -0.21
PHGDH-226ENST00000641756 U3KQE9 123 aa13.72□□□□□ -0.21
PHGDH-226ENST00000641756 TSTD3H0UI37 97 aa13.72□□□□□ -0.21
PHGDH-226ENST00000641756 ZNF80P51504 273 aaPredicted RBP13.72□□□□□ -0.21
PHGDH-226ENST00000641756 KLF5Q13887 457 aaPredicted RBP13.72□□□□□ -0.21
PHGDH-226ENST00000641756 FAM162BQ5T6X4 162 aa13.72□□□□□ -0.21
PHGDH-226ENST00000641756 ATP6V0BQ99437 205 aa13.72□□□□□ -0.21
PHGDH-226ENST00000641756 A0A1B0GUT8 65 aa13.71□□□□□ -0.21
PHGDH-226ENST00000641756 TMEM189A5PLL7 270 aa13.71□□□□□ -0.21
PHGDH-226ENST00000641756 ZNF324O75467 553 aaPredicted RBP13.71□□□□□ -0.21
PHGDH-226ENST00000641756 ZNF705DP0CH99 300 aaPredicted RBP13.71□□□□□ -0.21
PHGDH-226ENST00000641756 ZNF705BP0CI00 300 aaPredicted RBP13.71□□□□□ -0.21
PHGDH-226ENST00000641756 SLC50A1Q9BRV3 221 aa13.71□□□□□ -0.21
PHGDH-226ENST00000641756 CENPEQ02224 2701 aa13.71□□□□□ -0.22
PHGDH-226ENST00000641756 TRAV8-2A0A0B4J237 113 aa13.7□□□□□ -0.22
PHGDH-226ENST00000641756 H3BUA1 57 aa13.7□□□□□ -0.22
PHGDH-226ENST00000641756 C8orf86Q6ZUL3 223 aa13.7□□□□□ -0.22
PHGDH-226ENST00000641756 NRN1Q9NPD7 142 aa13.7□□□□□ -0.22
PHGDH-226ENST00000641756 USP9YO00507 2555 aaPredicted RBP13.7□□□□□ -0.22
PHGDH-226ENST00000641756 NTF3P20783 257 aa13.7□□□□□ -0.22
PHGDH-226ENST00000641756 SSTP61278 116 aa13.7□□□□□ -0.22
PHGDH-226ENST00000641756 USMG5Q96IX5 58 aa13.7□□□□□ -0.22
PHGDH-226ENST00000641756 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.69□□□□□ -0.22
PHGDH-226ENST00000641756 FBLL1A6NHQ2 334 aaKnown RBP13.69□□□□□ -0.22
PHGDH-226ENST00000641756 COX8CQ7Z4L0 72 aa13.69□□□□□ -0.22
PHGDH-226ENST00000641756 OR4X2Q8NGF9 303 aa13.69□□□□□ -0.22
PHGDH-226ENST00000641756 SMAD7O15105 426 aaKnown RBP13.69□□□□□ -0.22
PHGDH-226ENST00000641756 KRTDAPP60985 99 aa13.69□□□□□ -0.22
PHGDH-226ENST00000641756 RIGQ13278 110 aa13.69□□□□□ -0.22
PHGDH-226ENST00000641756 RNASEKQ6P5S7 137 aaKnown RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms