RNA–Protein interactions for RNA: ENST00000641523.1

CASC19-238, Transcript of cancer susceptibility 19, human

BASIC

Gene CASC19, Length 1,558 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CASC19-238	ENST00000641523	CD7	P09564	240 aa		4.57	□□□□□ -1.68
CASC19-238	ENST00000641523	OR5AL1	P0C617	328 aa		4.57	□□□□□ -1.68
CASC19-238	ENST00000641523	RBMY1D	P0C7P1	496 aa	Known RBP	4.57	□□□□□ -1.68
CASC19-238	ENST00000641523	RBMY1A1	P0DJD3	496 aa	Known RBP	4.57	□□□□□ -1.68
CASC19-238	ENST00000641523	HIST1H1E	P10412	219 aa	Known RBP	4.57	□□□□□ -1.68
CASC19-238	ENST00000641523	LPAR6	P43657	344 aa		4.57	□□□□□ -1.68
CASC19-238	ENST00000641523	CMC4	P56277	68 aa	Predicted RBP	4.57	□□□□□ -1.68
CASC19-238	ENST00000641523	CYCS	P99999	105 aa	Known RBP	4.57	□□□□□ -1.68
CASC19-238	ENST00000641523	CLINT1	Q14677	625 aa		4.57	□□□□□ -1.68
CASC19-238	ENST00000641523	LINC00322	Q6ZN03	302 aa	Predicted RBP	4.57	□□□□□ -1.68
CASC19-238	ENST00000641523	DEFB125	Q8N687	156 aa		4.57	□□□□□ -1.68
CASC19-238	ENST00000641523	MRAP2	Q96G30	205 aa		4.57	□□□□□ -1.68
CASC19-238	ENST00000641523	GGTLC1	Q9BX51	225 aa		4.57	□□□□□ -1.68
CASC19-238	ENST00000641523	ZNF436	Q9C0F3	470 aa	Predicted RBP	4.57	□□□□□ -1.68
CASC19-238	ENST00000641523	C6orf62	Q9GZU0	229 aa	Predicted RBP	4.57	□□□□□ -1.68
CASC19-238	ENST00000641523	SCRT2	Q9NQ03	307 aa		4.57	□□□□□ -1.68
CASC19-238	ENST00000641523	TMEM14B	Q9NUH8	114 aa		4.57	□□□□□ -1.68
CASC19-238	ENST00000641523	COMMD3	Q9UBI1	195 aa		4.57	□□□□□ -1.68
CASC19-238	ENST00000641523	DYNC2H1	Q8NCM8	4307 aa	Known RBP	4.56	□□□□□ -1.68
CASC19-238	ENST00000641523	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	4.56	□□□□□ -1.68
CASC19-238	ENST00000641523	TRAV3	A0A0B4J244	114 aa		4.56	□□□□□ -1.68
CASC19-238	ENST00000641523	TEX50	A0A1B0GTY4	177 aa		4.56	□□□□□ -1.68
CASC19-238	ENST00000641523	FAM240A	A0A1B0GVK7	77 aa		4.56	□□□□□ -1.68
CASC19-238	ENST00000641523	CORT	O00230	105 aa		4.56	□□□□□ -1.68
CASC19-238	ENST00000641523	NXPH4	O95158	308 aa		4.56	□□□□□ -1.68
CASC19-238	ENST00000641523	G6PC	P35575	357 aa		4.56	□□□□□ -1.68
CASC19-238	ENST00000641523	RND2	P52198	227 aa		4.56	□□□□□ -1.68
CASC19-238	ENST00000641523	LSM3	P62310	102 aa	Known RBP	4.56	□□□□□ -1.68
CASC19-238	ENST00000641523	MRPS10	P82664	201 aa	Known RBP	4.56	□□□□□ -1.68
CASC19-238	ENST00000641523	WT1-AS	Q06250	92 aa		4.56	□□□□□ -1.68
CASC19-238	ENST00000641523	RNASE10	Q5GAN6	216 aa	Known RBP	4.56	□□□□□ -1.68
CASC19-238	ENST00000641523	ZFAND6	Q6FIF0	208 aa		4.56	□□□□□ -1.68
CASC19-238	ENST00000641523	SNX29P2	Q8IUI4	249 aa		4.56	□□□□□ -1.68
CASC19-238	ENST00000641523	OR10G7	Q8NGN6	311 aa		4.56	□□□□□ -1.68
CASC19-238	ENST00000641523	GINS3	Q9BRX5	216 aa		4.56	□□□□□ -1.68
CASC19-238	ENST00000641523	PDCD10	Q9BUL8	212 aa		4.56	□□□□□ -1.68
CASC19-238	ENST00000641523	FXYD6	Q9H0Q3	95 aa		4.56	□□□□□ -1.68
CASC19-238	ENST00000641523	MAP1LC3A	Q9H492	121 aa		4.56	□□□□□ -1.68
CASC19-238	ENST00000641523	TP53TG1	Q9Y2A0	90 aa		4.56	□□□□□ -1.68
CASC19-238	ENST00000641523	STARD9	Q9P2P6	4700 aa		4.55	□□□□□ -1.68
CASC19-238	ENST00000641523	TGIF2-C20orf24	A0A0A6YYL0	155 aa		4.55	□□□□□ -1.68
CASC19-238	ENST00000641523	TEX48	A0A1B0GUV7	120 aa		4.55	□□□□□ -1.68
CASC19-238	ENST00000641523	OR2T8	A6NH00	312 aa		4.55	□□□□□ -1.68
CASC19-238	ENST00000641523	FAM25A	B3EWG3	89 aa		4.55	□□□□□ -1.68
CASC19-238	ENST00000641523	FAM25C	B3EWG5	89 aa		4.55	□□□□□ -1.68
CASC19-238	ENST00000641523	FAM25G	B3EWG6	89 aa		4.55	□□□□□ -1.68
CASC19-238	ENST00000641523	EIF4E	P06730	217 aa	Known RBP	4.55	□□□□□ -1.68
CASC19-238	ENST00000641523	PGAM2	P15259	253 aa		4.55	□□□□□ -1.68
CASC19-238	ENST00000641523	RPL29	P47914	159 aa	Known RBP	4.55	□□□□□ -1.68
CASC19-238	ENST00000641523	TCL1A	P56279	114 aa		4.55	□□□□□ -1.68
CASC19-238	ENST00000641523	ERH	P84090	104 aa	Known RBP	4.55	□□□□□ -1.68
CASC19-238	ENST00000641523	PRCD	Q00LT1	54 aa		4.55	□□□□□ -1.68
CASC19-238	ENST00000641523		Q56UQ5	140 aa		4.55	□□□□□ -1.68
CASC19-238	ENST00000641523	UNQ9165/PRO28630	Q6UXU0	137 aa		4.55	□□□□□ -1.68
CASC19-238	ENST00000641523	UBAC2	Q8NBM4	344 aa		4.55	□□□□□ -1.68
CASC19-238	ENST00000641523	OR10W1	Q8NGF6	305 aa		4.55	□□□□□ -1.68
CASC19-238	ENST00000641523	ZFAND1	Q8TCF1	268 aa		4.55	□□□□□ -1.68
CASC19-238	ENST00000641523	C9orf85	Q96MD7	179 aa		4.55	□□□□□ -1.68
CASC19-238	ENST00000641523	CACFD1	Q9UGQ2	172 aa		4.55	□□□□□ -1.68
CASC19-238	ENST00000641523		S4R3C0	116 aa		4.55	□□□□□ -1.68
CASC19-238	ENST00000641523	IGHV3-38	A0A0C4DH36	116 aa		4.54	□□□□□ -1.68
CASC19-238	ENST00000641523		H7C1H1	209 aa		4.54	□□□□□ -1.68
CASC19-238	ENST00000641523	GABARAP	O95166	117 aa		4.54	□□□□□ -1.68
CASC19-238	ENST00000641523	SNAPIN	O95295	136 aa		4.54	□□□□□ -1.68
CASC19-238	ENST00000641523	TGFBR1	P36897	503 aa		4.54	□□□□□ -1.68
CASC19-238	ENST00000641523	SNCA	P37840	140 aa		4.54	□□□□□ -1.68
CASC19-238	ENST00000641523	AKR1C2	P52895	323 aa		4.54	□□□□□ -1.68
CASC19-238	ENST00000641523	HSPE1	P61604	102 aa	Known RBP	4.54	□□□□□ -1.68
CASC19-238	ENST00000641523	NCS1	P62166	190 aa		4.54	□□□□□ -1.68
CASC19-238	ENST00000641523	RPL19	P84098	196 aa	Known RBP	4.54	□□□□□ -1.68
CASC19-238	ENST00000641523	SSBP1	Q04837	148 aa	Known RBP	4.54	□□□□□ -1.68
CASC19-238	ENST00000641523	TNFRSF9	Q07011	255 aa		4.54	□□□□□ -1.68
CASC19-238	ENST00000641523	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	4.54	□□□□□ -1.68
CASC19-238	ENST00000641523	LGI3	Q8N145	548 aa		4.54	□□□□□ -1.68
CASC19-238	ENST00000641523	SLC35G3	Q8N808	338 aa		4.54	□□□□□ -1.68
CASC19-238	ENST00000641523	OR51G1	Q8NGK1	321 aa		4.54	□□□□□ -1.68
CASC19-238	ENST00000641523	PGLYRP4	Q96LB8	373 aa		4.54	□□□□□ -1.68
CASC19-238	ENST00000641523	ENY2	Q9NPA8	101 aa		4.54	□□□□□ -1.68
CASC19-238	ENST00000641523	COPZ2	Q9P299	210 aa		4.54	□□□□□ -1.68
CASC19-238	ENST00000641523	IGHV3OR16-12	A0A075B7B8	117 aa		4.53	□□□□□ -1.68
CASC19-238	ENST00000641523	PIGBOS1	A0A0B4J2F0	54 aa		4.53	□□□□□ -1.68
CASC19-238	ENST00000641523	IGHV3-35	A0A0C4DH35	117 aa		4.53	□□□□□ -1.68
CASC19-238	ENST00000641523	SMIM9	A6NGZ8	99 aa		4.53	□□□□□ -1.68
CASC19-238	ENST00000641523	MPTX1	A8MV57	137 aa		4.53	□□□□□ -1.68
CASC19-238	ENST00000641523	INS-IGF2	F8WCM5	200 aa		4.53	□□□□□ -1.68
CASC19-238	ENST00000641523		K7EIM0	57 aa		4.53	□□□□□ -1.68
CASC19-238	ENST00000641523	GNG7	O60262	68 aa		4.53	□□□□□ -1.68
CASC19-238	ENST00000641523	YIF1A	O95070	293 aa		4.53	□□□□□ -1.68
CASC19-238	ENST00000641523	ELK1	P19419	428 aa		4.53	□□□□□ -1.68
CASC19-238	ENST00000641523	TAS2R19	P59542	299 aa		4.53	□□□□□ -1.68
CASC19-238	ENST00000641523	TRIQK	Q629K1	86 aa		4.53	□□□□□ -1.68
CASC19-238	ENST00000641523	UFSP1	Q6NVU6	142 aa		4.53	□□□□□ -1.68
CASC19-238	ENST00000641523	MRPL55	Q7Z7F7	128 aa	Known RBP	4.53	□□□□□ -1.68
CASC19-238	ENST00000641523	TMED4	Q7Z7H5	227 aa		4.53	□□□□□ -1.68
CASC19-238	ENST00000641523	RNASE11	Q8TAA1	199 aa	Known RBP	4.53	□□□□□ -1.68
CASC19-238	ENST00000641523	GALNT14	Q96FL9	552 aa		4.53	□□□□□ -1.68
CASC19-238	ENST00000641523	OR10C1	Q96KK4	312 aa		4.53	□□□□□ -1.68
CASC19-238	ENST00000641523	KIR2DL4	Q99706	377 aa		4.53	□□□□□ -1.68
CASC19-238	ENST00000641523	RNF126	Q9BV68	326 aa		4.53	□□□□□ -1.68
CASC19-238	ENST00000641523	WFDC10A	Q9H1F0	79 aa		4.53	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms