RNA–Protein interactions for RNA: ENST00000640653.1

VEGFA-232, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-232ENST00000640653 TAS2R60P59551 318 aa17.91■□□□□ 0.46
VEGFA-232ENST00000640653 FRAS1Q86XX4 4008 aa17.91■□□□□ 0.46
VEGFA-232ENST00000640653 DEFA1P59665 94 aa17.9■□□□□ 0.46
VEGFA-232ENST00000640653 DEFA3P59666 94 aa17.9■□□□□ 0.46
VEGFA-232ENST00000640653 NHLH2Q02577 135 aa17.9■□□□□ 0.46
VEGFA-232ENST00000640653 LRRC37A5PQ49AS3 106 aa17.9■□□□□ 0.46
VEGFA-232ENST00000640653 POM121L12Q8N7R1 296 aa17.9■□□□□ 0.46
VEGFA-232ENST00000640653 NPCDR1Q9BY65 106 aa17.9■□□□□ 0.46
VEGFA-232ENST00000640653 ZNF253O75346 499 aa17.89■□□□□ 0.45
VEGFA-232ENST00000640653 OR5C1Q8NGR4 320 aa17.89■□□□□ 0.45
VEGFA-232ENST00000640653 MARVELD1Q9BSK0 173 aa17.89■□□□□ 0.45
VEGFA-232ENST00000640653 OR5AC2Q9NZP5 309 aa17.89■□□□□ 0.45
VEGFA-232ENST00000640653 PRAC2D3DTV9 90 aa17.88■□□□□ 0.45
VEGFA-232ENST00000640653 AZU1P20160 251 aa17.88■□□□□ 0.45
VEGFA-232ENST00000640653 C16orf74Q96GX8 76 aa17.88■□□□□ 0.45
VEGFA-232ENST00000640653 C20orf144Q9BQM9 153 aa17.88■□□□□ 0.45
VEGFA-232ENST00000640653 ZNF586Q9NXT0 402 aa17.88■□□□□ 0.45
VEGFA-232ENST00000640653 TMEM14CQ9P0S9 112 aa17.88■□□□□ 0.45
VEGFA-232ENST00000640653 HTN1P15515 57 aa17.87■□□□□ 0.45
VEGFA-232ENST00000640653 H7BYZ3 331 aa17.86■□□□□ 0.45
VEGFA-232ENST00000640653 THAP6Q8TBB0 222 aa17.86■□□□□ 0.45
VEGFA-232ENST00000640653 DNAH10Q8IVF4 4471 aa17.86■□□□□ 0.45
VEGFA-232ENST00000640653 TRBV19A0A075B6N1 114 aa17.85■□□□□ 0.45
VEGFA-232ENST00000640653 PLAC8L1A1L4L8 177 aa17.85■□□□□ 0.45
VEGFA-232ENST00000640653 H0YIZ8 118 aa17.85■□□□□ 0.45
VEGFA-232ENST00000640653 DEFB130BP0DP73 79 aa17.85■□□□□ 0.45
VEGFA-232ENST00000640653 DEFB130AP0DP74 79 aa17.85■□□□□ 0.45
VEGFA-232ENST00000640653 HIST1H1EP10412 219 aaKnown RBP17.85■□□□□ 0.45
VEGFA-232ENST00000640653 TMEM88Q6PEY1 159 aa17.85■□□□□ 0.45
VEGFA-232ENST00000640653 ZNF493Q6ZR52 646 aa17.85■□□□□ 0.45
VEGFA-232ENST00000640653 UBE2DNLQ8IWF7 75 aa17.85■□□□□ 0.45
VEGFA-232ENST00000640653 MRPL53Q96EL3 112 aaKnown RBP17.85■□□□□ 0.45
VEGFA-232ENST00000640653 KCNIP2Q9NS61 270 aa17.85■□□□□ 0.45
VEGFA-232ENST00000640653 SSNA1O43805 119 aa17.84■□□□□ 0.45
VEGFA-232ENST00000640653 PDE6HQ13956 83 aa17.84■□□□□ 0.45
VEGFA-232ENST00000640653 CLINT1Q14677 625 aa17.84■□□□□ 0.45
VEGFA-232ENST00000640653 ODF3Q96PU9 254 aa17.84■□□□□ 0.45
VEGFA-232ENST00000640653 TIMM9Q9Y5J7 89 aa17.84■□□□□ 0.45
VEGFA-232ENST00000640653 NPIPB6E9PJ23 425 aa17.83■□□□□ 0.44
VEGFA-232ENST00000640653 LEPP41159 167 aa17.83■□□□□ 0.44
VEGFA-232ENST00000640653 H2BFSP57053 126 aa17.83■□□□□ 0.44
VEGFA-232ENST00000640653 GCSAMLQ5JQS6 135 aa17.83■□□□□ 0.44
VEGFA-232ENST00000640653 GFI1BQ5VTD9 330 aa17.83■□□□□ 0.44
VEGFA-232ENST00000640653 TMEM263Q8WUH6 116 aaKnown RBP17.83■□□□□ 0.44
VEGFA-232ENST00000640653 PPP1R1CQ8WVI7 109 aa17.83■□□□□ 0.44
VEGFA-232ENST00000640653 PARD6GQ9BYG4 376 aaPredicted RBP17.83■□□□□ 0.44
VEGFA-232ENST00000640653 BATF3Q9NR55 127 aa17.83■□□□□ 0.44
VEGFA-232ENST00000640653 PRELID1Q9Y255 219 aa17.83■□□□□ 0.44
VEGFA-232ENST00000640653 TIMM8BQ9Y5J9 83 aaPredicted RBP17.83■□□□□ 0.44
VEGFA-232ENST00000640653 PET100P0DJ07 73 aa17.82■□□□□ 0.44
VEGFA-232ENST00000640653 C15orf53Q8NAA6 179 aa17.82■□□□□ 0.44
VEGFA-232ENST00000640653 WDR61Q9GZS3 305 aaKnown RBP17.82■□□□□ 0.44
VEGFA-232ENST00000640653 CT45A10P0DMU9 189 aa17.81■□□□□ 0.44
VEGFA-232ENST00000640653 PYYP10082 97 aa17.81■□□□□ 0.44
VEGFA-232ENST00000640653 KIR3DS1Q14943 382 aa17.81■□□□□ 0.44
VEGFA-232ENST00000640653 FCN2Q15485 313 aa17.81■□□□□ 0.44
VEGFA-232ENST00000640653 CCDC28AQ8IWP9 274 aa17.81■□□□□ 0.44
VEGFA-232ENST00000640653 RNASE8Q8TDE3 154 aaKnown RBP17.81■□□□□ 0.44
VEGFA-232ENST00000640653 C17orf112F2Z3M2 114 aa17.8■□□□□ 0.44
VEGFA-232ENST00000640653 BLNKQ8WV28 456 aa17.8■□□□□ 0.44
VEGFA-232ENST00000640653 SLC25A2Q9BXI2 301 aa17.8■□□□□ 0.44
VEGFA-232ENST00000640653 AAMDCQ9H7C9 122 aa17.8■□□□□ 0.44
VEGFA-232ENST00000640653 CBY3A6NI87 242 aa17.79■□□□□ 0.44
VEGFA-232ENST00000640653 J3KRW8 73 aa17.79■□□□□ 0.44
VEGFA-232ENST00000640653 M0R3E3 92 aa17.79■□□□□ 0.44
VEGFA-232ENST00000640653 NDUFB4O95168 129 aa17.79■□□□□ 0.44
VEGFA-232ENST00000640653 ATP5G1P05496 136 aa17.79■□□□□ 0.44
VEGFA-232ENST00000640653 ATP5G3P48201 142 aa17.79■□□□□ 0.44
VEGFA-232ENST00000640653 RNF212Q495C1 297 aa17.79■□□□□ 0.44
VEGFA-232ENST00000640653 ATP5SQ99766 215 aa17.79■□□□□ 0.44
VEGFA-232ENST00000640653 MRPL32Q9BYC8 188 aaKnown RBP17.79■□□□□ 0.44
VEGFA-232ENST00000640653 F5H768 121 aa17.78■□□□□ 0.44
VEGFA-232ENST00000640653 MPC2O95563 127 aa17.78■□□□□ 0.44
VEGFA-232ENST00000640653 MIR17HGQ75NE6 70 aa17.78■□□□□ 0.44
VEGFA-232ENST00000640653 NOP10Q9NPE3 64 aaKnown RBP17.78■□□□□ 0.44
VEGFA-232ENST00000640653 LINC00336Q6ZUF6 198 aa17.77■□□□□ 0.44
VEGFA-232ENST00000640653 EXOC3-AS1Q8N2X6 119 aa17.77■□□□□ 0.44
VEGFA-232ENST00000640653 FAM167A-AS1Q96KT0 104 aa17.77■□□□□ 0.44
VEGFA-232ENST00000640653 LINC00477Q96M19 166 aa17.77■□□□□ 0.44
VEGFA-232ENST00000640653 HSPB11Q9Y547 144 aa17.77■□□□□ 0.44
VEGFA-232ENST00000640653 TRAV12-3A0A0B4J271 114 aa17.76■□□□□ 0.43
VEGFA-232ENST00000640653 OR51M1Q9H341 326 aa17.76■□□□□ 0.43
VEGFA-232ENST00000640653 M0R2N4 97 aa17.75■□□□□ 0.43
VEGFA-232ENST00000640653 SLC25A5P05141 298 aaKnown RBP17.75■□□□□ 0.43
VEGFA-232ENST00000640653 NBEAP1P0C6P0 100 aa17.75■□□□□ 0.43
VEGFA-232ENST00000640653 ERCC8Q13216 396 aa17.75■□□□□ 0.43
VEGFA-232ENST00000640653 ICAM4Q14773 271 aa17.75■□□□□ 0.43
VEGFA-232ENST00000640653 LGALS9BQ3B8N2 356 aa17.75■□□□□ 0.43
VEGFA-232ENST00000640653 PYGO2Q9BRQ0 406 aa17.75■□□□□ 0.43
VEGFA-232ENST00000640653 PAXXQ9BUH6 204 aa17.75■□□□□ 0.43
VEGFA-232ENST00000640653 FUT9Q9Y231 359 aa17.75■□□□□ 0.43
VEGFA-232ENST00000640653 SNURFLB1AK76 121 aa17.74■□□□□ 0.43
VEGFA-232ENST00000640653 RPL12P30050 165 aaKnown RBP17.74■□□□□ 0.43
VEGFA-232ENST00000640653 IFNA5P01569 189 aa17.73■□□□□ 0.43
VEGFA-232ENST00000640653 SCGB1C1Q8TD33 95 aa17.73■□□□□ 0.43
VEGFA-232ENST00000640653 AGPAT4-IT1Q9H0P7 198 aa17.73■□□□□ 0.43
VEGFA-232ENST00000640653 C7orf71A4D174 169 aa17.72■□□□□ 0.43
VEGFA-232ENST00000640653 FAM122CQ6P4D5 195 aa17.72■□□□□ 0.43
VEGFA-232ENST00000640653 C9orf47Q6ZRZ4 202 aa17.72■□□□□ 0.43
VEGFA-232ENST00000640653 RNF141Q8WVD5 230 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms