RNA–Protein interactions for RNA: ENST00000640568.1

TSPAN9-208, Transcript of tetraspanin 9, humanhuman

TSL 5

Gene TSPAN9, Length 1,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-208ENST00000640568 UBE2G2P60604 165 aa15.98■□□□□ 0.15
TSPAN9-208ENST00000640568 ZNF680Q8NEM1 530 aa15.98■□□□□ 0.15
TSPAN9-208ENST00000640568 CMTM2Q8TAZ6 248 aa15.98■□□□□ 0.15
TSPAN9-208ENST00000640568 MRPL53Q96EL3 112 aaKnown RBP15.98■□□□□ 0.15
TSPAN9-208ENST00000640568 SAV1Q9H4B6 383 aaPredicted RBP15.98■□□□□ 0.15
TSPAN9-208ENST00000640568 PGPA6NDG6 321 aa15.97■□□□□ 0.15
TSPAN9-208ENST00000640568 ZNF705FA8MVS1 300 aaPredicted RBP15.97■□□□□ 0.15
TSPAN9-208ENST00000640568 M0R3E3 92 aa15.97■□□□□ 0.15
TSPAN9-208ENST00000640568 PPT1P50897 306 aa15.97■□□□□ 0.15
TSPAN9-208ENST00000640568 DEFB1P60022 68 aa15.97■□□□□ 0.15
TSPAN9-208ENST00000640568 CITED4Q96RK1 184 aa15.97■□□□□ 0.15
TSPAN9-208ENST00000640568 A0A1W2PRE2 83 aa15.97■□□□□ 0.15
TSPAN9-208ENST00000640568 F6UB75 175 aa15.97■□□□□ 0.15
TSPAN9-208ENST00000640568 LOC102724200A0A096LPH7 203 aaPredicted RBP15.96■□□□□ 0.14
TSPAN9-208ENST00000640568 TRAV1-1A0A0B4J248 108 aa15.96■□□□□ 0.14
TSPAN9-208ENST00000640568 A8MZ25 164 aa15.96■□□□□ 0.14
TSPAN9-208ENST00000640568 HLA-DRB4P13762 266 aa15.96■□□□□ 0.14
TSPAN9-208ENST00000640568 GDF5OSQ5U4N7 250 aa15.96■□□□□ 0.14
TSPAN9-208ENST00000640568 RXFP4Q8TDU9 374 aa15.96■□□□□ 0.14
TSPAN9-208ENST00000640568 HLA-DRB4X5D2U9 266 aa15.96■□□□□ 0.14
TSPAN9-208ENST00000640568 A0A0J9YX75 114 aa15.95■□□□□ 0.14
TSPAN9-208ENST00000640568 DUSP14O95147 198 aaKnown RBP15.95■□□□□ 0.14
TSPAN9-208ENST00000640568 SLC25A5P05141 298 aaKnown RBP15.95■□□□□ 0.14
TSPAN9-208ENST00000640568 RPL35AP18077 110 aaKnown RBP15.95■□□□□ 0.14
TSPAN9-208ENST00000640568 HIST1H1AQ02539 215 aaPredicted RBP15.95■□□□□ 0.14
TSPAN9-208ENST00000640568 OR4B1Q8NGF8 309 aa15.95■□□□□ 0.14
TSPAN9-208ENST00000640568 OR8A1Q8NGG7 326 aa15.95■□□□□ 0.14
TSPAN9-208ENST00000640568 OR10J6PQ8NGY7 276 aa15.95■□□□□ 0.14
TSPAN9-208ENST00000640568 NKX6-2Q9C056 277 aaPredicted RBP15.95■□□□□ 0.14
TSPAN9-208ENST00000640568 RPH3ALQ9UNE2 315 aa15.95■□□□□ 0.14
TSPAN9-208ENST00000640568 PRB4P10163 310 aaPredicted RBP15.94■□□□□ 0.14
TSPAN9-208ENST00000640568 SUMO1P63165 101 aaKnown RBP15.94■□□□□ 0.14
TSPAN9-208ENST00000640568 CST9LP1Q5W188 147 aa15.94■□□□□ 0.14
TSPAN9-208ENST00000640568 FAM74A7A6NL05 159 aa15.93■□□□□ 0.14
TSPAN9-208ENST00000640568 H3BMM0 161 aa15.93■□□□□ 0.14
TSPAN9-208ENST00000640568 IFNA1P01562 189 aa15.93■□□□□ 0.14
TSPAN9-208ENST00000640568 IGKV3-20P01619 116 aa15.93■□□□□ 0.14
TSPAN9-208ENST00000640568 FRMD6-AS1P0C7T7 363 aa15.93■□□□□ 0.14
TSPAN9-208ENST00000640568 MANBALQ9NQG1 85 aa15.93■□□□□ 0.14
TSPAN9-208ENST00000640568 GNG13Q9P2W3 67 aa15.93■□□□□ 0.14
TSPAN9-208ENST00000640568 YTHDF2Q9Y5A9 579 aaKnown RBP15.93■□□□□ 0.14
TSPAN9-208ENST00000640568 ARL2-SNX15V9GYD0 113 aa15.93■□□□□ 0.14
TSPAN9-208ENST00000640568 RBMY1BA6NDE4 496 aaKnown RBP15.92■□□□□ 0.14
TSPAN9-208ENST00000640568 RBMY1EA6NEQ0 496 aaKnown RBP15.92■□□□□ 0.14
TSPAN9-208ENST00000640568 PRAC2D3DTV9 90 aa15.92■□□□□ 0.14
TSPAN9-208ENST00000640568 PAGE4O60829 102 aa15.92■□□□□ 0.14
TSPAN9-208ENST00000640568 RBMY1DP0C7P1 496 aaKnown RBP15.92■□□□□ 0.14
TSPAN9-208ENST00000640568 ZNF705DP0CH99 300 aaPredicted RBP15.92■□□□□ 0.14
TSPAN9-208ENST00000640568 ZNF705BP0CI00 300 aaPredicted RBP15.92■□□□□ 0.14
TSPAN9-208ENST00000640568 TRPT1Q86TN4 253 aaKnown RBP15.92■□□□□ 0.14
TSPAN9-208ENST00000640568 C5orf17Q8NAS9 161 aa15.92■□□□□ 0.14
TSPAN9-208ENST00000640568 PPP1R14DQ9NXH3 145 aa15.92■□□□□ 0.14
TSPAN9-208ENST00000640568 GGTLC3B5MD39 225 aa15.91■□□□□ 0.14
TSPAN9-208ENST00000640568 CNN1P51911 297 aaKnown RBP15.91■□□□□ 0.14
TSPAN9-208ENST00000640568 APOC4P55056 127 aa15.91■□□□□ 0.14
TSPAN9-208ENST00000640568 CCL20P78556 96 aa15.91■□□□□ 0.14
TSPAN9-208ENST00000640568 NUTF2P61970 127 aaKnown RBP15.91■□□□□ 0.14
TSPAN9-208ENST00000640568 DIRC3C9JPN6 131 aa15.9■□□□□ 0.14
TSPAN9-208ENST00000640568 ARL6IP6Q8N6S5 226 aa15.9■□□□□ 0.14
TSPAN9-208ENST00000640568 IGKV2-40A0A087WW87 121 aaPredicted RBP15.89■□□□□ 0.13
TSPAN9-208ENST00000640568 K7EQM0 130 aa15.89■□□□□ 0.13
TSPAN9-208ENST00000640568 IGKV2D-40P01614 121 aaPredicted RBP15.89■□□□□ 0.13
TSPAN9-208ENST00000640568 RAB14P61106 215 aa15.89■□□□□ 0.13
TSPAN9-208ENST00000640568 GNG5P63218 68 aa15.89■□□□□ 0.13
TSPAN9-208ENST00000640568 MORN3Q6PF18 240 aaPredicted RBP15.89■□□□□ 0.13
TSPAN9-208ENST00000640568 ZNF767PQ75MW2 155 aa15.89■□□□□ 0.13
TSPAN9-208ENST00000640568 ATP5G3P48201 142 aa15.88■□□□□ 0.13
TSPAN9-208ENST00000640568 TMEM78Q5T7P6 136 aa15.88■□□□□ 0.13
TSPAN9-208ENST00000640568 GOLT1AQ6ZVE7 132 aa15.88■□□□□ 0.13
TSPAN9-208ENST00000640568 PCNPQ8WW12 178 aaKnown RBP15.88■□□□□ 0.13
TSPAN9-208ENST00000640568 CSTL1Q9H114 145 aa15.88■□□□□ 0.13
TSPAN9-208ENST00000640568 EPDR1Q9UM22 224 aa15.88■□□□□ 0.13
TSPAN9-208ENST00000640568 KIR2DL5BA0A0G2JN68 375 aa15.87■□□□□ 0.13
TSPAN9-208ENST00000640568 KIR2DL5BA0A0G2JPC4 375 aa15.87■□□□□ 0.13
TSPAN9-208ENST00000640568 SERTM2A0A1B0GWG4 89 aa15.87■□□□□ 0.13
TSPAN9-208ENST00000640568 C11orf94C9JXX5 98 aa15.87■□□□□ 0.13
TSPAN9-208ENST00000640568 LINC00322Q6ZN03 302 aaPredicted RBP15.87■□□□□ 0.13
TSPAN9-208ENST00000640568 KIR2DL5AQ8N109 375 aa15.87■□□□□ 0.13
TSPAN9-208ENST00000640568 KIR2DL5BQ8NHK3 375 aa15.87■□□□□ 0.13
TSPAN9-208ENST00000640568 LYPD6BQ8NI32 183 aa15.87■□□□□ 0.13
TSPAN9-208ENST00000640568 CLUHP3Q96NS8 147 aa15.87■□□□□ 0.13
TSPAN9-208ENST00000640568 RBAKDNA6NC62 111 aa15.86■□□□□ 0.13
TSPAN9-208ENST00000640568 NPIPB6E9PJ23 425 aa15.86■□□□□ 0.13
TSPAN9-208ENST00000640568 F6UZH7 168 aa15.86■□□□□ 0.13
TSPAN9-208ENST00000640568 CA1P00915 261 aaPredicted RBP15.86■□□□□ 0.13
TSPAN9-208ENST00000640568 TCRAP04437 139 aa15.86■□□□□ 0.13
TSPAN9-208ENST00000640568 TAGLN2P37802 199 aaKnown RBP15.86■□□□□ 0.13
TSPAN9-208ENST00000640568 ERCC8Q13216 396 aa15.86■□□□□ 0.13
TSPAN9-208ENST00000640568 HAGHQ16775 308 aa15.86■□□□□ 0.13
TSPAN9-208ENST00000640568 LINC00477Q96M19 166 aa15.86■□□□□ 0.13
TSPAN9-208ENST00000640568 TCEAL7Q9BRU2 100 aa15.86■□□□□ 0.13
TSPAN9-208ENST00000640568 ATG101Q9BSB4 218 aa15.86■□□□□ 0.13
TSPAN9-208ENST00000640568 BCL2P10415 239 aa15.85■□□□□ 0.13
TSPAN9-208ENST00000640568 PMS2P11Q13670 270 aa15.85■□□□□ 0.13
TSPAN9-208ENST00000640568 C9orf47Q6ZRZ4 202 aa15.85■□□□□ 0.13
TSPAN9-208ENST00000640568 CYB561D1Q8N8Q1 229 aa15.85■□□□□ 0.13
TSPAN9-208ENST00000640568 HIST1H2BAQ96A08 127 aa15.85■□□□□ 0.13
TSPAN9-208ENST00000640568 VGLL1Q99990 258 aa15.85■□□□□ 0.13
TSPAN9-208ENST00000640568 TXNDC17Q9BRA2 123 aa15.85■□□□□ 0.13
TSPAN9-208ENST00000640568 A8MTW9 85 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms