RNA–Protein interactions for RNA: ENST00000640460.1

PAX6-272, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 1,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-272ENST00000640460 DEFB114Q30KQ6 69 aa9.45□□□□□ -0.9
PAX6-272ENST00000640460 BPIFA4PQ86YQ2 179 aa9.45□□□□□ -0.9
PAX6-272ENST00000640460 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.45□□□□□ -0.9
PAX6-272ENST00000640460 LINC00479Q96M42 142 aa9.45□□□□□ -0.9
PAX6-272ENST00000640460 RABAC1Q9UI14 185 aa9.45□□□□□ -0.9
PAX6-272ENST00000640460 ZNF256Q9Y2P7 627 aaPredicted RBP9.45□□□□□ -0.9
PAX6-272ENST00000640460 PGPA6NDG6 321 aa9.45□□□□□ -0.9
PAX6-272ENST00000640460 BUB3O43684 328 aa9.45□□□□□ -0.9
PAX6-272ENST00000640460 CD300EQ496F6 205 aaPredicted RBP9.45□□□□□ -0.9
PAX6-272ENST00000640460 DYNLRB2Q8TF09 96 aa9.45□□□□□ -0.9
PAX6-272ENST00000640460 DNAH9Q9NYC9 4486 aa9.44□□□□□ -0.9
PAX6-272ENST00000640460 TRBV19A0A075B6N1 114 aa9.44□□□□□ -0.9
PAX6-272ENST00000640460 IGHV3-49A0A0A0MS15 119 aa9.44□□□□□ -0.9
PAX6-272ENST00000640460 RPL35P42766 123 aaKnown RBP9.44□□□□□ -0.9
PAX6-272ENST00000640460 PNRC1Q12796 327 aaPredicted RBP9.44□□□□□ -0.9
PAX6-272ENST00000640460 U3KQE9 123 aa9.44□□□□□ -0.9
PAX6-272ENST00000640460 COL7A1Q02388 2944 aa9.43□□□□□ -0.9
PAX6-272ENST00000640460 IGHV3OR16-13A0A075B7E8 117 aa9.43□□□□□ -0.9
PAX6-272ENST00000640460 IGHV3-74A0A0B4J1X5 117 aa9.43□□□□□ -0.9
PAX6-272ENST00000640460 IGHV7-4-1A0A0J9YVY3 117 aa9.43□□□□□ -0.9
PAX6-272ENST00000640460 SLC17A3O00476 420 aa9.43□□□□□ -0.9
PAX6-272ENST00000640460 GNG5P63218 68 aa9.43□□□□□ -0.9
PAX6-272ENST00000640460 LINC01551Q86U37 167 aa9.43□□□□□ -0.9
PAX6-272ENST00000640460 EXOC3-AS1Q8N2X6 119 aa9.43□□□□□ -0.9
PAX6-272ENST00000640460 OCC1Q8TAD7 63 aa9.43□□□□□ -0.9
PAX6-272ENST00000640460 B9D2Q9BPU9 175 aa9.43□□□□□ -0.9
PAX6-272ENST00000640460 Q9H3A6 140 aa9.43□□□□□ -0.9
PAX6-272ENST00000640460 SMPXQ9UHP9 88 aa9.43□□□□□ -0.9
PAX6-272ENST00000640460 EPDR1Q9UM22 224 aa9.43□□□□□ -0.9
PAX6-272ENST00000640460 IGHV3-66A0A0C4DH42 116 aa9.42□□□□□ -0.9
PAX6-272ENST00000640460 HELTA6NFD8 242 aa9.42□□□□□ -0.9
PAX6-272ENST00000640460 ADIRFQ15847 76 aa9.42□□□□□ -0.9
PAX6-272ENST00000640460 SIGLEC15Q6ZMC9 328 aa9.42□□□□□ -0.9
PAX6-272ENST00000640460 TMEM61Q8N0U2 210 aa9.42□□□□□ -0.9
PAX6-272ENST00000640460 ISOC2Q96AB3 205 aa9.42□□□□□ -0.9
PAX6-272ENST00000640460 RHPN1-AS1Q9BWJ2 59 aa9.42□□□□□ -0.9
PAX6-272ENST00000640460 A0A087WWC5 75 aa9.42□□□□□ -0.9
PAX6-272ENST00000640460 B4DEV8 164 aa9.42□□□□□ -0.9
PAX6-272ENST00000640460 CHEK1O14757 476 aa9.42□□□□□ -0.9
PAX6-272ENST00000640460 RNF212Q495C1 297 aa9.42□□□□□ -0.9
PAX6-272ENST00000640460 LCN12Q6JVE5 192 aa9.42□□□□□ -0.9
PAX6-272ENST00000640460 S100A7AQ86SG5 101 aa9.42□□□□□ -0.9
PAX6-272ENST00000640460 OR8I2Q8N0Y5 310 aa9.42□□□□□ -0.9
PAX6-272ENST00000640460 OR2K2Q8NGT1 345 aa9.42□□□□□ -0.9
PAX6-272ENST00000640460 TUBA4BQ9H853 241 aa9.42□□□□□ -0.9
PAX6-272ENST00000640460 SMCO4Q9NRQ5 59 aa9.42□□□□□ -0.9
PAX6-272ENST00000640460 TRAV34A0A0B4J273 112 aa9.41□□□□□ -0.9
PAX6-272ENST00000640460 COLCA2A8K830 154 aa9.41□□□□□ -0.9
PAX6-272ENST00000640460 ZNF785A8K8V0 405 aa9.41□□□□□ -0.9
PAX6-272ENST00000640460 C9JCJ5 164 aa9.41□□□□□ -0.9
PAX6-272ENST00000640460 K7EN84 100 aa9.41□□□□□ -0.9
PAX6-272ENST00000640460 PEX7O00628 323 aa9.41□□□□□ -0.9
PAX6-272ENST00000640460 TSPAN4O14817 238 aa9.41□□□□□ -0.9
PAX6-272ENST00000640460 IGLV2-8P01709 118 aa9.41□□□□□ -0.9
PAX6-272ENST00000640460 SLC25A5P05141 298 aaKnown RBP9.41□□□□□ -0.9
PAX6-272ENST00000640460 PRB4P10163 310 aaPredicted RBP9.41□□□□□ -0.9
PAX6-272ENST00000640460 RPL7P18124 248 aaKnown RBP9.41□□□□□ -0.9
PAX6-272ENST00000640460 IGF2BP2-AS1Q96M15 143 aa9.41□□□□□ -0.9
PAX6-272ENST00000640460 YPEL4Q96NS1 127 aa9.41□□□□□ -0.9
PAX6-272ENST00000640460 METTL26Q96S19 204 aa9.41□□□□□ -0.9
PAX6-272ENST00000640460 OTORQ9NRC9 128 aa9.41□□□□□ -0.9
PAX6-272ENST00000640460 HIST1H2BAQ96A08 127 aa9.4□□□□□ -0.9
PAX6-272ENST00000640460 SGK494Q96LW2 274 aa9.4□□□□□ -0.9
PAX6-272ENST00000640460 RNF24Q9Y225 148 aa9.4□□□□□ -0.9
PAX6-272ENST00000640460 ISLRO14498 428 aa9.39□□□□□ -0.91
PAX6-272ENST00000640460 TCRAP04437 139 aa9.39□□□□□ -0.91
PAX6-272ENST00000640460 CENPWQ5EE01 88 aa9.39□□□□□ -0.91
PAX6-272ENST00000640460 LYPD1Q8N2G4 141 aa9.39□□□□□ -0.91
PAX6-272ENST00000640460 C5orf17Q8NAS9 161 aa9.39□□□□□ -0.91
PAX6-272ENST00000640460 TCEAL7Q9BRU2 100 aa9.39□□□□□ -0.91
PAX6-272ENST00000640460 TMEM242Q9NWH2 141 aa9.39□□□□□ -0.91
PAX6-272ENST00000640460 KLF12Q9Y4X4 402 aa9.39□□□□□ -0.91
PAX6-272ENST00000640460 M0R3E3 92 aa9.39□□□□□ -0.91
PAX6-272ENST00000640460 TAS2R60P59551 318 aa9.39□□□□□ -0.91
PAX6-272ENST00000640460 PDE6HQ13956 83 aa9.39□□□□□ -0.91
PAX6-272ENST00000640460 C1orf194Q5T5A4 169 aa9.39□□□□□ -0.91
PAX6-272ENST00000640460 IGFL4Q6B9Z1 124 aa9.39□□□□□ -0.91
PAX6-272ENST00000640460 RBPMS2Q6ZRY4 209 aaKnown RBP9.39□□□□□ -0.91
PAX6-272ENST00000640460 LY96Q9Y6Y9 160 aa9.39□□□□□ -0.91
PAX6-272ENST00000640460 TRAV25A0A0B4J276 109 aa9.38□□□□□ -0.91
PAX6-272ENST00000640460 IGLV2-11P01706 119 aa9.38□□□□□ -0.91
PAX6-272ENST00000640460 GNG4P50150 75 aa9.38□□□□□ -0.91
PAX6-272ENST00000640460 OR5I1Q13606 314 aa9.38□□□□□ -0.91
PAX6-272ENST00000640460 TMEM183BQ1AE95 376 aa9.38□□□□□ -0.91
PAX6-272ENST00000640460 C16orf54Q6UWD8 224 aa9.38□□□□□ -0.91
PAX6-272ENST00000640460 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.38□□□□□ -0.91
PAX6-272ENST00000640460 Q8N1Y9 231 aa9.38□□□□□ -0.91
PAX6-272ENST00000640460 FAM24BQ8N5W8 94 aa9.38□□□□□ -0.91
PAX6-272ENST00000640460 ATG101Q9BSB4 218 aa9.38□□□□□ -0.91
PAX6-272ENST00000640460 RPH3ALQ9UNE2 315 aa9.38□□□□□ -0.91
PAX6-272ENST00000640460 A0A1W2PS18 150 aa9.37□□□□□ -0.91
PAX6-272ENST00000640460 HLA-DMBP28068 263 aa9.37□□□□□ -0.91
PAX6-272ENST00000640460 S100A7P31151 101 aa9.37□□□□□ -0.91
PAX6-272ENST00000640460 BMI1P35226 326 aa9.37□□□□□ -0.91
PAX6-272ENST00000640460 CNN1P51911 297 aaKnown RBP9.37□□□□□ -0.91
PAX6-272ENST00000640460 TCF24Q7RTU0 167 aa9.37□□□□□ -0.91
PAX6-272ENST00000640460 GLMPQ8WWB7 406 aa9.37□□□□□ -0.91
PAX6-272ENST00000640460 TMA7Q9Y2S6 64 aaKnown RBP9.37□□□□□ -0.91
PAX6-272ENST00000640460 A0A087X0K7 114 aa9.36□□□□□ -0.91
PAX6-272ENST00000640460 TRAV8-1A0A0A6YYK1 113 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms