RNA–Protein interactions for RNA: ENST00000640458.1

VPS72-207, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 5 BASIC

Gene VPS72, Length 689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-207ENST00000640458 FOXI2Q6ZQN5 318 aa13.23□□□□□ -0.29
VPS72-207ENST00000640458 OR11H2Q8NH07 326 aa13.23□□□□□ -0.29
VPS72-207ENST00000640458 FAM213BQ8TBF2 198 aa13.23□□□□□ -0.29
VPS72-207ENST00000640458 PHLDA1Q8WV24 401 aaPredicted RBP13.23□□□□□ -0.29
VPS72-207ENST00000640458 SAV1Q9H4B6 383 aaPredicted RBP13.23□□□□□ -0.29
VPS72-207ENST00000640458 RPRMQ9NS64 109 aa13.23□□□□□ -0.29
VPS72-207ENST00000640458 CTXND1A0A1B0GTU2 59 aa13.22□□□□□ -0.29
VPS72-207ENST00000640458 ATF4P18848 351 aaPredicted RBP13.22□□□□□ -0.29
VPS72-207ENST00000640458 BLOC1S1P78537 153 aa13.22□□□□□ -0.29
VPS72-207ENST00000640458 KHDC3LQ587J8 217 aa13.22□□□□□ -0.29
VPS72-207ENST00000640458 GDF5OSQ5U4N7 250 aa13.22□□□□□ -0.29
VPS72-207ENST00000640458 SPATA31B1PQ5VZV4 182 aa13.22□□□□□ -0.29
VPS72-207ENST00000640458 ZNF680Q8NEM1 530 aa13.22□□□□□ -0.29
VPS72-207ENST00000640458 MUC4Q99102 2169 aa13.21□□□□□ -0.29
VPS72-207ENST00000640458 AGRNO00468 2067 aa13.21□□□□□ -0.29
VPS72-207ENST00000640458 DEFB1P60022 68 aa13.21□□□□□ -0.29
VPS72-207ENST00000640458 RAB14P61106 215 aa13.21□□□□□ -0.29
VPS72-207ENST00000640458 NUTF2P61970 127 aaKnown RBP13.21□□□□□ -0.29
VPS72-207ENST00000640458 ZNF767PQ75MW2 155 aa13.21□□□□□ -0.29
VPS72-207ENST00000640458 BPIFA4PQ86YQ2 179 aa13.21□□□□□ -0.29
VPS72-207ENST00000640458 C20orf173Q96LM9 149 aa13.21□□□□□ -0.29
VPS72-207ENST00000640458 CLUHP3Q96NS8 147 aa13.21□□□□□ -0.29
VPS72-207ENST00000640458 A0A087X0K7 114 aa13.2□□□□□ -0.3
VPS72-207ENST00000640458 TRAV8-2A0A0B4J237 113 aa13.2□□□□□ -0.3
VPS72-207ENST00000640458 ZNF705EA8MWA4 302 aaPredicted RBP13.2□□□□□ -0.3
VPS72-207ENST00000640458 MRPS12O15235 138 aaKnown RBP13.2□□□□□ -0.3
VPS72-207ENST00000640458 H2AFB1P0C5Y9 115 aa13.2□□□□□ -0.3
VPS72-207ENST00000640458 FAM74A1Q5RGS3 127 aa13.2□□□□□ -0.3
VPS72-207ENST00000640458 PQLC2Q6ZP29 291 aa13.2□□□□□ -0.3
VPS72-207ENST00000640458 CSNK1G2-AS1Q8NCQ2 148 aa13.2□□□□□ -0.3
VPS72-207ENST00000640458 RAB24Q969Q5 203 aa13.2□□□□□ -0.3
VPS72-207ENST00000640458 OR7C2O60412 319 aa13.19□□□□□ -0.3
VPS72-207ENST00000640458 HBE1P02100 147 aa13.19□□□□□ -0.3
VPS72-207ENST00000640458 MED14OSP0DP75 135 aa13.19□□□□□ -0.3
VPS72-207ENST00000640458 EBLN2Q6P2I7 272 aa13.19□□□□□ -0.3
VPS72-207ENST00000640458 MIR17HGQ75NE6 70 aa13.19□□□□□ -0.3
VPS72-207ENST00000640458 SAT2Q96F10 170 aaPredicted RBP13.19□□□□□ -0.3
VPS72-207ENST00000640458 C1QTNF4Q9BXJ3 329 aa13.19□□□□□ -0.3
VPS72-207ENST00000640458 A0A0J9YX75 114 aa13.18□□□□□ -0.3
VPS72-207ENST00000640458 CXorf1O96002 111 aa13.18□□□□□ -0.3
VPS72-207ENST00000640458 SFT2D1Q8WV19 159 aa13.18□□□□□ -0.3
VPS72-207ENST00000640458 OR51M1Q9H341 326 aa13.18□□□□□ -0.3
VPS72-207ENST00000640458 C11orf68Q9H3H3 251 aaKnown RBP13.18□□□□□ -0.3
VPS72-207ENST00000640458 CLEC5AQ9NY25 188 aa13.18□□□□□ -0.3
VPS72-207ENST00000640458 MAP1LC3B2A6NCE7 125 aa13.17□□□□□ -0.3
VPS72-207ENST00000640458 F6UB75 175 aa13.17□□□□□ -0.3
VPS72-207ENST00000640458 STAG3L2P0CL84 134 aa13.17□□□□□ -0.3
VPS72-207ENST00000640458 STAG3L3P0CL85 134 aa13.17□□□□□ -0.3
VPS72-207ENST00000640458 MORN5Q5VZ52 161 aa13.17□□□□□ -0.3
VPS72-207ENST00000640458 IGFL4Q6B9Z1 124 aa13.17□□□□□ -0.3
VPS72-207ENST00000640458 LCN15Q6UWW0 184 aa13.17□□□□□ -0.3
VPS72-207ENST00000640458 IQCF2Q8IXL9 164 aa13.17□□□□□ -0.3
VPS72-207ENST00000640458 PAXXQ9BUH6 204 aa13.17□□□□□ -0.3
VPS72-207ENST00000640458 MAP1LC3BQ9GZQ8 125 aa13.17□□□□□ -0.3
VPS72-207ENST00000640458 TRAV5A0A0B4J249 113 aa13.16□□□□□ -0.3
VPS72-207ENST00000640458 HMGB3O15347 200 aaKnown RBP13.16□□□□□ -0.3
VPS72-207ENST00000640458 IGKV3-20P01619 116 aa13.16□□□□□ -0.3
VPS72-207ENST00000640458 OR4B1Q8NGF8 309 aa13.16□□□□□ -0.3
VPS72-207ENST00000640458 MBD3L1Q8WWY6 194 aa13.16□□□□□ -0.3
VPS72-207ENST00000640458 PLA2G2EQ9NZK7 142 aa13.16□□□□□ -0.3
VPS72-207ENST00000640458 TMEM14CQ9P0S9 112 aa13.16□□□□□ -0.3
VPS72-207ENST00000640458 XCL2Q9UBD3 114 aa13.16□□□□□ -0.3
VPS72-207ENST00000640458 X6R8D5 127 aa13.16□□□□□ -0.3
VPS72-207ENST00000640458 A8MTW9 85 aa13.15□□□□□ -0.3
VPS72-207ENST00000640458 MIFP14174 115 aa13.15□□□□□ -0.3
VPS72-207ENST00000640458 FHITP49789 147 aa13.15□□□□□ -0.3
VPS72-207ENST00000640458 PPT1P50897 306 aa13.15□□□□□ -0.3
VPS72-207ENST00000640458 PSG9Q00887 426 aa13.15□□□□□ -0.3
VPS72-207ENST00000640458 GUK1Q16774 197 aa13.15□□□□□ -0.3
VPS72-207ENST00000640458 RNF182Q8N6D2 247 aa13.15□□□□□ -0.3
VPS72-207ENST00000640458 Q8NAQ8 132 aa13.15□□□□□ -0.3
VPS72-207ENST00000640458 SLC25A2Q9BXI2 301 aa13.15□□□□□ -0.3
VPS72-207ENST00000640458 TMEM167BQ9NRX6 74 aa13.15□□□□□ -0.3
VPS72-207ENST00000640458 ARL14EPLP0DKL9 152 aa13.14□□□□□ -0.31
VPS72-207ENST00000640458 IGLC2P0DOY2 106 aa13.14□□□□□ -0.31
VPS72-207ENST00000640458 HIST1H1EP10412 219 aaKnown RBP13.14□□□□□ -0.31
VPS72-207ENST00000640458 UBE2L3P68036 154 aaKnown RBP13.14□□□□□ -0.31
VPS72-207ENST00000640458 VPS13DQ5THJ4 4388 aa13.14□□□□□ -0.31
VPS72-207ENST00000640458 ABCA13Q86UQ4 5058 aa13.13□□□□□ -0.31
VPS72-207ENST00000640458 IGHV4-28A0A0C4DH34 117 aa13.13□□□□□ -0.31
VPS72-207ENST00000640458 DUSP14O95147 198 aaKnown RBP13.13□□□□□ -0.31
VPS72-207ENST00000640458 HLA-DMBP28068 263 aa13.13□□□□□ -0.31
VPS72-207ENST00000640458 FXYD7P58549 80 aa13.13□□□□□ -0.31
VPS72-207ENST00000640458 IFITM2Q01629 132 aa13.13□□□□□ -0.31
VPS72-207ENST00000640458 ZNF726P1Q15940 193 aa13.13□□□□□ -0.31
VPS72-207ENST00000640458 PSG3Q16557 428 aa13.13□□□□□ -0.31
VPS72-207ENST00000640458 ZNF738Q8NE65 137 aa13.13□□□□□ -0.31
VPS72-207ENST00000640458 FAM167A-AS1Q96KT0 104 aa13.13□□□□□ -0.31
VPS72-207ENST00000640458 SLC50A1Q9BRV3 221 aa13.13□□□□□ -0.31
VPS72-207ENST00000640458 SLC35B3Q9H1N7 401 aa13.13□□□□□ -0.31
VPS72-207ENST00000640458 HRH4Q9H3N8 390 aa13.13□□□□□ -0.31
VPS72-207ENST00000640458 ZNF331Q9NQX6 463 aaPredicted RBP13.13□□□□□ -0.31
VPS72-207ENST00000640458 TRAV1-1A0A0B4J248 108 aa13.12□□□□□ -0.31
VPS72-207ENST00000640458 DEFB4AO15263 64 aa13.12□□□□□ -0.31
VPS72-207ENST00000640458 IFNA1P01562 189 aa13.12□□□□□ -0.31
VPS72-207ENST00000640458 NBEAP1P0C6P0 100 aa13.12□□□□□ -0.31
VPS72-207ENST00000640458 RBMY1A1P0DJD3 496 aaKnown RBP13.12□□□□□ -0.31
VPS72-207ENST00000640458 RBMY1CP0DJD4 496 aa13.12□□□□□ -0.31
VPS72-207ENST00000640458 GCHFRP30047 84 aa13.12□□□□□ -0.31
VPS72-207ENST00000640458 CNN1P51911 297 aaKnown RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms