RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 KIR2DL5BA0A0G2JN68 375 aa9.68□□□□□ -0.86
GTF3A-209ENST00000640289 KIR2DL5BA0A0G2JPC4 375 aa9.68□□□□□ -0.86
GTF3A-209ENST00000640289 CXorf1O96002 111 aa9.68□□□□□ -0.86
GTF3A-209ENST00000640289 C4BPBP20851 252 aa9.68□□□□□ -0.86
GTF3A-209ENST00000640289 CNN1P51911 297 aaKnown RBP9.68□□□□□ -0.86
GTF3A-209ENST00000640289 FGF8P55075 233 aaPredicted RBP9.68□□□□□ -0.86
GTF3A-209ENST00000640289 HIST1H1AQ02539 215 aaPredicted RBP9.68□□□□□ -0.86
GTF3A-209ENST00000640289 KIR2DL5AQ8N109 375 aa9.68□□□□□ -0.86
GTF3A-209ENST00000640289 OR8A1Q8NGG7 326 aa9.68□□□□□ -0.86
GTF3A-209ENST00000640289 KIR2DL5BQ8NHK3 375 aa9.68□□□□□ -0.86
GTF3A-209ENST00000640289 FAM213BQ8TBF2 198 aa9.68□□□□□ -0.86
GTF3A-209ENST00000640289 Q9H3A6 140 aa9.68□□□□□ -0.86
GTF3A-209ENST00000640289 TMPRSS5Q9H3S3 457 aa9.68□□□□□ -0.86
GTF3A-209ENST00000640289 DNAH9Q9NYC9 4486 aa9.68□□□□□ -0.86
GTF3A-209ENST00000640289 MAP1LC3B2A6NCE7 125 aa9.67□□□□□ -0.86
GTF3A-209ENST00000640289 UMAD1C9J7I0 102 aa9.67□□□□□ -0.86
GTF3A-209ENST00000640289 BOLA2-SMG1P6H3BVE0 249 aa9.67□□□□□ -0.86
GTF3A-209ENST00000640289 CA1P00915 261 aaPredicted RBP9.67□□□□□ -0.86
GTF3A-209ENST00000640289 GIG44P09565 113 aaPredicted RBP9.67□□□□□ -0.86
GTF3A-209ENST00000640289 FXYD7P58549 80 aa9.67□□□□□ -0.86
GTF3A-209ENST00000640289 DEFB135Q30KP9 77 aa9.67□□□□□ -0.86
GTF3A-209ENST00000640289 IQCF2Q8IXL9 164 aa9.67□□□□□ -0.86
GTF3A-209ENST00000640289 MAP1LC3BQ9GZQ8 125 aa9.67□□□□□ -0.86
GTF3A-209ENST00000640289 AAMDCQ9H7C9 122 aa9.67□□□□□ -0.86
GTF3A-209ENST00000640289 CLEC5AQ9NY25 188 aa9.67□□□□□ -0.86
GTF3A-209ENST00000640289 NHLRC4P0CG21 123 aaPredicted RBP9.66□□□□□ -0.86
GTF3A-209ENST00000640289 MORN3Q6PF18 240 aaPredicted RBP9.66□□□□□ -0.86
GTF3A-209ENST00000640289 SUN5Q8TC36 379 aa9.66□□□□□ -0.86
GTF3A-209ENST00000640289 MRPL53Q96EL3 112 aaKnown RBP9.66□□□□□ -0.86
GTF3A-209ENST00000640289 SPATA25Q9BR10 227 aa9.66□□□□□ -0.86
GTF3A-209ENST00000640289 SLC35B3Q9H1N7 401 aa9.66□□□□□ -0.86
GTF3A-209ENST00000640289 PRELID1Q9Y255 219 aa9.66□□□□□ -0.86
GTF3A-209ENST00000640289 A0A1B0GV50 99 aa9.65□□□□□ -0.86
GTF3A-209ENST00000640289 PGPA6NDG6 321 aa9.65□□□□□ -0.86
GTF3A-209ENST00000640289 A8MTW9 85 aa9.65□□□□□ -0.86
GTF3A-209ENST00000640289 UBE2CO00762 179 aa9.65□□□□□ -0.86
GTF3A-209ENST00000640289 DUSP14O95147 198 aaKnown RBP9.65□□□□□ -0.86
GTF3A-209ENST00000640289 FAM74A1Q5RGS3 127 aa9.65□□□□□ -0.86
GTF3A-209ENST00000640289 EIF5AL1Q6IS14 154 aaKnown RBP9.65□□□□□ -0.86
GTF3A-209ENST00000640289 AMTNQ6UX39 209 aa9.65□□□□□ -0.86
GTF3A-209ENST00000640289 LYPD1Q8N2G4 141 aa9.65□□□□□ -0.86
GTF3A-209ENST00000640289 ZMAT4Q9H898 229 aa9.65□□□□□ -0.86
GTF3A-209ENST00000640289 TMEM167BQ9NRX6 74 aa9.65□□□□□ -0.86
GTF3A-209ENST00000640289 IGKV2-40A0A087WW87 121 aaPredicted RBP9.64□□□□□ -0.87
GTF3A-209ENST00000640289 IGKV2D-40P01614 121 aaPredicted RBP9.64□□□□□ -0.87
GTF3A-209ENST00000640289 SULT1A2P50226 295 aa9.64□□□□□ -0.87
GTF3A-209ENST00000640289 NUTF2P61970 127 aaKnown RBP9.64□□□□□ -0.87
GTF3A-209ENST00000640289 ERCC8Q13216 396 aa9.64□□□□□ -0.87
GTF3A-209ENST00000640289 ALKAL2Q6UX46 152 aa9.64□□□□□ -0.87
GTF3A-209ENST00000640289 DPPA3Q6W0C5 159 aa9.64□□□□□ -0.87
GTF3A-209ENST00000640289 Q6ZWC4 215 aa9.64□□□□□ -0.87
GTF3A-209ENST00000640289 OR10J6PQ8NGY7 276 aa9.64□□□□□ -0.87
GTF3A-209ENST00000640289 SFT2D1Q8WV19 159 aa9.64□□□□□ -0.87
GTF3A-209ENST00000640289 MBD3L1Q8WWY6 194 aa9.64□□□□□ -0.87
GTF3A-209ENST00000640289 CLUHP3Q96NS8 147 aa9.64□□□□□ -0.87
GTF3A-209ENST00000640289 RCHY1Q96PM5 261 aa9.64□□□□□ -0.87
GTF3A-209ENST00000640289 OVOL2Q9BRP0 275 aa9.64□□□□□ -0.87
GTF3A-209ENST00000640289 OTORQ9NRC9 128 aa9.64□□□□□ -0.87
GTF3A-209ENST00000640289 XCL2Q9UBD3 114 aa9.64□□□□□ -0.87
GTF3A-209ENST00000640289 RPH3ALQ9UNE2 315 aa9.64□□□□□ -0.87
GTF3A-209ENST00000640289 HUWE1Q7Z6Z7 4374 aaKnown RBP9.63□□□□□ -0.87
GTF3A-209ENST00000640289 M0R2Z0 102 aa9.63□□□□□ -0.87
GTF3A-209ENST00000640289 SPRY2O43597 315 aa9.63□□□□□ -0.87
GTF3A-209ENST00000640289 H2AFB1P0C5Y9 115 aa9.63□□□□□ -0.87
GTF3A-209ENST00000640289 UBE2G2P60604 165 aa9.63□□□□□ -0.87
GTF3A-209ENST00000640289 SPINK13Q1W4C9 94 aa9.63□□□□□ -0.87
GTF3A-209ENST00000640289 RNF183Q96D59 192 aa9.63□□□□□ -0.87
GTF3A-209ENST00000640289 AGRNO00468 2067 aa9.63□□□□□ -0.87
GTF3A-209ENST00000640289 GGTLC3B5MD39 225 aa9.62□□□□□ -0.87
GTF3A-209ENST00000640289 NPIPB6E9PJ23 425 aa9.62□□□□□ -0.87
GTF3A-209ENST00000640289 CSN1S1P47710 185 aa9.62□□□□□ -0.87
GTF3A-209ENST00000640289 RAB5CP51148 216 aa9.62□□□□□ -0.87
GTF3A-209ENST00000640289 GNG5P63218 68 aa9.62□□□□□ -0.87
GTF3A-209ENST00000640289 CSNK1G2-AS1Q8NCQ2 148 aa9.62□□□□□ -0.87
GTF3A-209ENST00000640289 VGLL1Q99990 258 aa9.62□□□□□ -0.87
GTF3A-209ENST00000640289 AGPAT4-IT1Q9H0P7 198 aa9.62□□□□□ -0.87
GTF3A-209ENST00000640289 PPP1R14DQ9NXH3 145 aa9.62□□□□□ -0.87
GTF3A-209ENST00000640289 YTHDF2Q9Y5A9 579 aaKnown RBP9.62□□□□□ -0.87
GTF3A-209ENST00000640289 U3KQK5 164 aa9.62□□□□□ -0.87
GTF3A-209ENST00000640289 TRAV12-2A0A075B6T6 113 aa9.61□□□□□ -0.87
GTF3A-209ENST00000640289 A0A1W2PRE2 83 aa9.61□□□□□ -0.87
GTF3A-209ENST00000640289 DIRC3C9JPN6 131 aa9.61□□□□□ -0.87
GTF3A-209ENST00000640289 SLC25A5P05141 298 aaKnown RBP9.61□□□□□ -0.87
GTF3A-209ENST00000640289 CT45A10P0DMU9 189 aa9.61□□□□□ -0.87
GTF3A-209ENST00000640289 SUMO1P63165 101 aaKnown RBP9.61□□□□□ -0.87
GTF3A-209ENST00000640289 KIR3DS1Q14943 382 aa9.61□□□□□ -0.87
GTF3A-209ENST00000640289 CMTM2Q8TAZ6 248 aa9.61□□□□□ -0.87
GTF3A-209ENST00000640289 RXFP4Q8TDU9 374 aa9.61□□□□□ -0.87
GTF3A-209ENST00000640289 TP53TG1Q9Y2A0 90 aa9.61□□□□□ -0.87
GTF3A-209ENST00000640289 FAM74A7A6NL05 159 aa9.6□□□□□ -0.87
GTF3A-209ENST00000640289 CRXO43186 299 aaPredicted RBP9.6□□□□□ -0.87
GTF3A-209ENST00000640289 CCL20P78556 96 aa9.6□□□□□ -0.87
GTF3A-209ENST00000640289 GOLT1AQ6ZVE7 132 aa9.6□□□□□ -0.87
GTF3A-209ENST00000640289 RARRES2Q99969 163 aa9.6□□□□□ -0.87
GTF3A-209ENST00000640289 C1QTNF4Q9BXJ3 329 aa9.6□□□□□ -0.87
GTF3A-209ENST00000640289 ZNF705EA8MWA4 302 aaPredicted RBP9.59□□□□□ -0.87
GTF3A-209ENST00000640289 J3KRW8 73 aa9.59□□□□□ -0.87
GTF3A-209ENST00000640289 TMEM78Q5T7P6 136 aa9.59□□□□□ -0.87
GTF3A-209ENST00000640289 C9orf47Q6ZRZ4 202 aa9.59□□□□□ -0.87
GTF3A-209ENST00000640289 C5orf17Q8NAS9 161 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms