RNA–Protein interactions for RNA: ENST00000640027.1

MED17-222, Transcript of mediator complex subunit 17, human

TSL 5

Gene MED17, Length 4,569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MED17-222	ENST00000640027	LINC01551	Q86U37	167 aa		11.27	□□□□□ -0.6
MED17-222	ENST00000640027	PLXNA4	Q9HCM2	1894 aa		11.27	□□□□□ -0.6
MED17-222	ENST00000640027	GAS1	P54826	345 aa		11.27	□□□□□ -0.61
MED17-222	ENST00000640027	DAD1	P61803	113 aa		11.27	□□□□□ -0.61
MED17-222	ENST00000640027	SRSF3	P84103	164 aa	Known RBP	11.27	□□□□□ -0.61
MED17-222	ENST00000640027	LYPD1	Q8N2G4	141 aa		11.27	□□□□□ -0.61
MED17-222	ENST00000640027	FAM110D	Q8TAY7	271 aa	Predicted RBP	11.27	□□□□□ -0.61
MED17-222	ENST00000640027		Q6P435	159 aa		11.27	□□□□□ -0.61
MED17-222	ENST00000640027	RPRML	Q8N4K4	120 aa		11.27	□□□□□ -0.61
MED17-222	ENST00000640027	SH2D1A	O60880	128 aa		11.26	□□□□□ -0.61
MED17-222	ENST00000640027	ARMS2	P0C7Q2	107 aa		11.26	□□□□□ -0.61
MED17-222	ENST00000640027		A6NNC1	897 aa		11.26	□□□□□ -0.61
MED17-222	ENST00000640027	PNRC2	Q9NPJ4	139 aa	Known RBP	11.26	□□□□□ -0.61
MED17-222	ENST00000640027	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	11.26	□□□□□ -0.61
MED17-222	ENST00000640027	DMRTC2	Q8IXT2	367 aa	Predicted RBP	11.26	□□□□□ -0.61
MED17-222	ENST00000640027	TRBV24-1	A0A075B6N3	115 aa		11.26	□□□□□ -0.61
MED17-222	ENST00000640027	ATP6V0E1	O15342	81 aa		11.26	□□□□□ -0.61
MED17-222	ENST00000640027	RNASE2	P10153	161 aa	Known RBP	11.26	□□□□□ -0.61
MED17-222	ENST00000640027	IGHV1-69D	A0A0B4J2H0	117 aa		11.25	□□□□□ -0.61
MED17-222	ENST00000640027	IGHV1-69	P01742	117 aa		11.25	□□□□□ -0.61
MED17-222	ENST00000640027	LY6G5B	Q8NDX9	201 aa		11.25	□□□□□ -0.61
MED17-222	ENST00000640027	LTBP2	Q14767	1821 aa		11.25	□□□□□ -0.61
MED17-222	ENST00000640027	FGF16	O43320	207 aa		11.25	□□□□□ -0.61
MED17-222	ENST00000640027	CEACAM8	P31997	349 aa	Predicted RBP	11.25	□□□□□ -0.61
MED17-222	ENST00000640027	RASL11A	Q6T310	242 aa		11.25	□□□□□ -0.61
MED17-222	ENST00000640027	TRBV6-6	A0A0A6YYG2	114 aa		11.25	□□□□□ -0.61
MED17-222	ENST00000640027	SPINK13	Q1W4C9	94 aa		11.25	□□□□□ -0.61
MED17-222	ENST00000640027		A0A1W2PPI3	338 aa		11.25	□□□□□ -0.61
MED17-222	ENST00000640027		G3V318	75 aa		11.25	□□□□□ -0.61
MED17-222	ENST00000640027	F8	P00451	2351 aa		11.24	□□□□□ -0.61
MED17-222	ENST00000640027	MST1L	Q2TV78	715 aa		11.24	□□□□□ -0.61
MED17-222	ENST00000640027	ZC2HC1B	Q5TFG8	222 aa		11.24	□□□□□ -0.61
MED17-222	ENST00000640027	RNF144B	Q7Z419	303 aa		11.24	□□□□□ -0.61
MED17-222	ENST00000640027	TRAV1-1	A0A0B4J248	108 aa		11.24	□□□□□ -0.61
MED17-222	ENST00000640027	RHOD	O00212	210 aa		11.24	□□□□□ -0.61
MED17-222	ENST00000640027	HSD52	Q0P140	79 aa		11.24	□□□□□ -0.61
MED17-222	ENST00000640027	FAM90A2P	Q658T7	463 aa		11.24	□□□□□ -0.61
MED17-222	ENST00000640027	C15orf62	A8K5M9	175 aa		11.24	□□□□□ -0.61
MED17-222	ENST00000640027	ZNF561-AS1	K7EIQ3	104 aa		11.24	□□□□□ -0.61
MED17-222	ENST00000640027	ZNF625	Q96I27	306 aa	Predicted RBP	11.24	□□□□□ -0.61
MED17-222	ENST00000640027	NDUFAF3	Q9BU61	184 aa		11.24	□□□□□ -0.61
MED17-222	ENST00000640027	DKK1	O94907	266 aa		11.23	□□□□□ -0.61
MED17-222	ENST00000640027	SPX	Q9BT56	116 aa		11.23	□□□□□ -0.61
MED17-222	ENST00000640027	ZNRD1	Q9P1U0	126 aa		11.23	□□□□□ -0.61
MED17-222	ENST00000640027	CGB7	P0DN87	165 aa		11.23	□□□□□ -0.61
MED17-222	ENST00000640027	GSN-AS1	Q9NRJ2	163 aa		11.23	□□□□□ -0.61
MED17-222	ENST00000640027	MYMX	A0A1B0GTQ4	84 aa		11.23	□□□□□ -0.61
MED17-222	ENST00000640027	GAGE12J	A6NER3	117 aa		11.23	□□□□□ -0.61
MED17-222	ENST00000640027	CFHR3	Q02985	330 aa		11.23	□□□□□ -0.61
MED17-222	ENST00000640027	GAGE1	Q13065	139 aa		11.23	□□□□□ -0.61
MED17-222	ENST00000640027	GAGE4	Q13068	117 aa		11.23	□□□□□ -0.61
MED17-222	ENST00000640027	GAGE5	Q13069	117 aa		11.23	□□□□□ -0.61
MED17-222	ENST00000640027	GAGE13	Q4V321	117 aa		11.23	□□□□□ -0.61
MED17-222	ENST00000640027	AMN1	Q8IY45	258 aa		11.23	□□□□□ -0.61
MED17-222	ENST00000640027	TMEM158	Q8WZ71	300 aa		11.23	□□□□□ -0.61
MED17-222	ENST00000640027	SRSF8	Q9BRL6	282 aa	Known RBP	11.23	□□□□□ -0.61
MED17-222	ENST00000640027	TCF20	Q9UGU0	1960 aa	Known RBP	11.22	□□□□□ -0.61
MED17-222	ENST00000640027	OBSL1	O75147	1896 aa		11.22	□□□□□ -0.61
MED17-222	ENST00000640027	GBF1	Q92538	1859 aa		11.22	□□□□□ -0.61
MED17-222	ENST00000640027	BCL6B	Q8N143	479 aa	Predicted RBP	11.22	□□□□□ -0.61
MED17-222	ENST00000640027	AMBP	P02760	352 aa		11.22	□□□□□ -0.61
MED17-222	ENST00000640027	TCTEX1D4	Q5JR98	221 aa		11.22	□□□□□ -0.61
MED17-222	ENST00000640027	ZNF581	Q9P0T4	197 aa		11.22	□□□□□ -0.61
MED17-222	ENST00000640027	LRRK2	Q5S007	2527 aa		11.22	□□□□□ -0.61
MED17-222	ENST00000640027	NDUFB8	O95169	186 aa		11.21	□□□□□ -0.61
MED17-222	ENST00000640027	CLPS	P04118	112 aa		11.21	□□□□□ -0.61
MED17-222	ENST00000640027	HIST1H4A	P62805	103 aa	Known RBP	11.21	□□□□□ -0.61
MED17-222	ENST00000640027	PDE6H	Q13956	83 aa		11.21	□□□□□ -0.61
MED17-222	ENST00000640027	SHANK2-AS3	Q9BTD1	123 aa		11.21	□□□□□ -0.61
MED17-222	ENST00000640027	TMEM242	Q9NWH2	141 aa		11.21	□□□□□ -0.61
MED17-222	ENST00000640027	LINC01619	G3V211	115 aa		11.21	□□□□□ -0.61
MED17-222	ENST00000640027	LGALS1	P09382	135 aa	Known RBP	11.21	□□□□□ -0.61
MED17-222	ENST00000640027	CGB3	P0DN86	165 aa		11.21	□□□□□ -0.61
MED17-222	ENST00000640027	ESD	P10768	282 aa		11.21	□□□□□ -0.61
MED17-222	ENST00000640027	RPL32	P62910	135 aa	Known RBP	11.21	□□□□□ -0.61
MED17-222	ENST00000640027		Q6ZRM9	215 aa		11.21	□□□□□ -0.61
MED17-222	ENST00000640027	NUP35	Q8NFH5	326 aa		11.21	□□□□□ -0.61
MED17-222	ENST00000640027	TIMM21	Q9BVV7	248 aa		11.21	□□□□□ -0.61
MED17-222	ENST00000640027	HIST1H2BL	Q99880	126 aa		11.21	□□□□□ -0.62
MED17-222	ENST00000640027	NAA38	Q9BRA0	125 aa	Known RBP	11.21	□□□□□ -0.62
MED17-222	ENST00000640027	SMKR1	H3BMG3	65 aa		11.21	□□□□□ -0.62
MED17-222	ENST00000640027	CHD3	Q12873	2000 aa	Known RBP	11.2	□□□□□ -0.62
MED17-222	ENST00000640027	LINC00479	Q96M42	142 aa		11.2	□□□□□ -0.62
MED17-222	ENST00000640027	IGF2R	P11717	2491 aa		11.2	□□□□□ -0.62
MED17-222	ENST00000640027	KIAA1671	Q9BY89	1806 aa		11.2	□□□□□ -0.62
MED17-222	ENST00000640027	IGHV3-16	A0A0C4DH30	117 aa		11.2	□□□□□ -0.62
MED17-222	ENST00000640027		E9PQ18	207 aa		11.2	□□□□□ -0.62
MED17-222	ENST00000640027	SPOCK3	Q9BQ16	436 aa		11.2	□□□□□ -0.62
MED17-222	ENST00000640027	PIEZO2	Q9H5I5	2752 aa		11.2	□□□□□ -0.62
MED17-222	ENST00000640027	LEPROT	O15243	131 aa		11.2	□□□□□ -0.62
MED17-222	ENST00000640027	GUSBP1	Q15486	140 aa		11.2	□□□□□ -0.62
MED17-222	ENST00000640027	SAMD5	Q5TGI4	173 aa		11.2	□□□□□ -0.62
MED17-222	ENST00000640027		A0A0G2JRQ6	117 aa		11.19	□□□□□ -0.62
MED17-222	ENST00000640027	GAGE12B	A1L429	117 aa		11.19	□□□□□ -0.62
MED17-222	ENST00000640027	GAGE7	O76087	117 aa		11.19	□□□□□ -0.62
MED17-222	ENST00000640027	GAGE12F	P0CL80	117 aa		11.19	□□□□□ -0.62
MED17-222	ENST00000640027	GAGE12G	P0CL81	117 aa		11.19	□□□□□ -0.62
MED17-222	ENST00000640027	GAGE12I	P0CL82	117 aa		11.19	□□□□□ -0.62
MED17-222	ENST00000640027	IGFL3	Q6UXB1	125 aa		11.19	□□□□□ -0.62
MED17-222	ENST00000640027	DENND4C	Q5VZ89	1909 aa		11.19	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 135.5 ms