RNA–Protein interactions for RNA: ENST00000638372.1

SCARB2-208, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-208ENST00000638372 LINC00311Q8N616 119 aa11.5□□□□□ -0.57
SCARB2-208ENST00000638372 RNF182Q8N6D2 247 aa11.5□□□□□ -0.57
SCARB2-208ENST00000638372 A6NNC1 897 aa11.5□□□□□ -0.57
SCARB2-208ENST00000638372 COTL1Q14019 142 aa11.5□□□□□ -0.57
SCARB2-208ENST00000638372 SPTBN4Q9H254 2564 aa11.49□□□□□ -0.57
SCARB2-208ENST00000638372 IGHV3-73A0A0B4J1V6 119 aa11.49□□□□□ -0.57
SCARB2-208ENST00000638372 DPM2O94777 84 aa11.49□□□□□ -0.57
SCARB2-208ENST00000638372 IFI27P40305 119 aaPredicted RBP11.49□□□□□ -0.57
SCARB2-208ENST00000638372 C14orf178Q8N769 122 aaPredicted RBP11.49□□□□□ -0.57
SCARB2-208ENST00000638372 SRSF8Q9BRL6 282 aaKnown RBP11.49□□□□□ -0.57
SCARB2-208ENST00000638372 OBSL1O75147 1896 aa11.49□□□□□ -0.57
SCARB2-208ENST00000638372 SYNJ2BPP57105 145 aa11.49□□□□□ -0.57
SCARB2-208ENST00000638372 USMG5Q96IX5 58 aa11.49□□□□□ -0.57
SCARB2-208ENST00000638372 SHISA9B4DS77 424 aa11.48□□□□□ -0.57
SCARB2-208ENST00000638372 TMEM101Q96IK0 257 aa11.48□□□□□ -0.57
SCARB2-208ENST00000638372 NHP2Q9NX24 153 aaKnown RBP11.48□□□□□ -0.57
SCARB2-208ENST00000638372 RNASE1P07998 156 aaKnown RBP11.48□□□□□ -0.57
SCARB2-208ENST00000638372 ORMDL2Q53FV1 153 aa11.48□□□□□ -0.57
SCARB2-208ENST00000638372 OR13C6PQ8NH95 151 aa11.48□□□□□ -0.57
SCARB2-208ENST00000638372 FNDC4Q9H6D8 234 aaPredicted RBP11.48□□□□□ -0.57
SCARB2-208ENST00000638372 USP9XQ93008 2570 aaPredicted RBP11.48□□□□□ -0.57
SCARB2-208ENST00000638372 DENND4AQ7Z401 1863 aa11.48□□□□□ -0.57
SCARB2-208ENST00000638372 SP5Q6BEB4 398 aaPredicted RBP11.48□□□□□ -0.57
SCARB2-208ENST00000638372 RASL11AQ6T310 242 aa11.48□□□□□ -0.57
SCARB2-208ENST00000638372 Q6ZSR3 168 aa11.48□□□□□ -0.57
SCARB2-208ENST00000638372 CHD8Q9HCK8 2581 aa11.48□□□□□ -0.57
SCARB2-208ENST00000638372 PCNTO95613 3336 aa11.48□□□□□ -0.57
SCARB2-208ENST00000638372 H3BUT2 72 aa11.48□□□□□ -0.57
SCARB2-208ENST00000638372 TYMSP04818 313 aa11.48□□□□□ -0.57
SCARB2-208ENST00000638372 LCNL1Q6ZST4 164 aa11.48□□□□□ -0.57
SCARB2-208ENST00000638372 C2orf88Q9BSF0 95 aa11.48□□□□□ -0.57
SCARB2-208ENST00000638372 KAAG1Q9UBP8 84 aa11.48□□□□□ -0.57
SCARB2-208ENST00000638372 USP9YO00507 2555 aaPredicted RBP11.47□□□□□ -0.57
SCARB2-208ENST00000638372 IGHV2-70DA0A0C4DH43 119 aa11.47□□□□□ -0.57
SCARB2-208ENST00000638372 hDV102S1A0JD36 115 aa11.47□□□□□ -0.57
SCARB2-208ENST00000638372 TMEM8BA6NDV4 472 aa11.47□□□□□ -0.57
SCARB2-208ENST00000638372 KRTAP27-1Q3LI81 207 aa11.47□□□□□ -0.57
SCARB2-208ENST00000638372 CD300EQ496F6 205 aaPredicted RBP11.47□□□□□ -0.57
SCARB2-208ENST00000638372 IGHV1-69DA0A0B4J2H0 117 aa11.47□□□□□ -0.57
SCARB2-208ENST00000638372 IGHV1-69P01742 117 aa11.47□□□□□ -0.57
SCARB2-208ENST00000638372 SLC25A2Q9BXI2 301 aa11.47□□□□□ -0.57
SCARB2-208ENST00000638372 SLC25A16P16260 332 aa11.47□□□□□ -0.57
SCARB2-208ENST00000638372 DAZ1Q9NQZ3 744 aaKnown RBP11.47□□□□□ -0.57
SCARB2-208ENST00000638372 SAP30O75446 220 aa11.46□□□□□ -0.57
SCARB2-208ENST00000638372 PDE6HQ13956 83 aa11.46□□□□□ -0.57
SCARB2-208ENST00000638372 SEM1Q6ZVN7 128 aa11.46□□□□□ -0.57
SCARB2-208ENST00000638372 LINC01356Q8N9X3 169 aa11.46□□□□□ -0.57
SCARB2-208ENST00000638372 LINC00477Q96M19 166 aa11.46□□□□□ -0.57
SCARB2-208ENST00000638372 DOPEY1Q5JWR5 2465 aa11.46□□□□□ -0.57
SCARB2-208ENST00000638372 TRBV19A0A075B6N1 114 aa11.46□□□□□ -0.57
SCARB2-208ENST00000638372 YPEL3P61236 119 aaPredicted RBP11.46□□□□□ -0.57
SCARB2-208ENST00000638372 KLHL30-AS1Q8NEE0 82 aa11.46□□□□□ -0.57
SCARB2-208ENST00000638372 FAM110DQ8TAY7 271 aaPredicted RBP11.46□□□□□ -0.57
SCARB2-208ENST00000638372 POU2AF1Q16633 256 aa11.46□□□□□ -0.58
SCARB2-208ENST00000638372 IGHV3-64A0A075B6Q5 118 aa11.46□□□□□ -0.58
SCARB2-208ENST00000638372 TMEM213A2RRL7 107 aa11.46□□□□□ -0.58
SCARB2-208ENST00000638372 SPCS1Q9Y6A9 102 aa11.46□□□□□ -0.58
SCARB2-208ENST00000638372 C1orf194Q5T5A4 169 aa11.45□□□□□ -0.58
SCARB2-208ENST00000638372 TRGV11A0A075B6L2 103 aa11.45□□□□□ -0.58
SCARB2-208ENST00000638372 A0A0U1RRA0 63 aa11.45□□□□□ -0.58
SCARB2-208ENST00000638372 FAM223BA6NKX1 122 aa11.45□□□□□ -0.58
SCARB2-208ENST00000638372 IGLC1P0CG04 106 aa11.45□□□□□ -0.58
SCARB2-208ENST00000638372 SSBP2P81877 361 aaPredicted RBP11.45□□□□□ -0.58
SCARB2-208ENST00000638372 FAM223AQ8IWN6 122 aa11.45□□□□□ -0.58
SCARB2-208ENST00000638372 ZNF664Q8N3J9 261 aa11.45□□□□□ -0.58
SCARB2-208ENST00000638372 JMJD1CQ15652 2540 aa11.45□□□□□ -0.58
SCARB2-208ENST00000638372 IGKCP01834 107 aa11.45□□□□□ -0.58
SCARB2-208ENST00000638372 ZNF876PQ49A33 203 aa11.45□□□□□ -0.58
SCARB2-208ENST00000638372 GTSCR1Q86UQ5 136 aa11.45□□□□□ -0.58
SCARB2-208ENST00000638372 ZFYVE26Q68DK2 2539 aa11.45□□□□□ -0.58
SCARB2-208ENST00000638372 NDUFS8O00217 210 aa11.44□□□□□ -0.58
SCARB2-208ENST00000638372 LAGE3Q14657 143 aa11.44□□□□□ -0.58
SCARB2-208ENST00000638372 PRR20EP86478 221 aa11.44□□□□□ -0.58
SCARB2-208ENST00000638372 PRR20CP86479 221 aa11.44□□□□□ -0.58
SCARB2-208ENST00000638372 PRR20DP86480 221 aa11.44□□□□□ -0.58
SCARB2-208ENST00000638372 PRR20BP86481 221 aa11.44□□□□□ -0.58
SCARB2-208ENST00000638372 PRR20AP86496 221 aa11.44□□□□□ -0.58
SCARB2-208ENST00000638372 C10orf91Q5T1B1 145 aa11.44□□□□□ -0.58
SCARB2-208ENST00000638372 C8orf49Q96NF6 230 aa11.44□□□□□ -0.58
SCARB2-208ENST00000638372 TRGV4A0A0C4DH28 118 aa11.44□□□□□ -0.58
SCARB2-208ENST00000638372 LHBP01229 141 aa11.44□□□□□ -0.58
SCARB2-208ENST00000638372 CHTOPQ9Y3Y2 248 aaKnown RBP11.44□□□□□ -0.58
SCARB2-208ENST00000638372 CHD3Q12873 2000 aaKnown RBP11.44□□□□□ -0.58
SCARB2-208ENST00000638372 UBE2E2Q96LR5 201 aa11.44□□□□□ -0.58
SCARB2-208ENST00000638372 LSM4Q9Y4Z0 139 aaKnown RBP11.44□□□□□ -0.58
SCARB2-208ENST00000638372 A0A087WWL8 130 aa11.43□□□□□ -0.58
SCARB2-208ENST00000638372 CD28P10747 220 aa11.43□□□□□ -0.58
SCARB2-208ENST00000638372 RIPPLY3P57055 190 aa11.43□□□□□ -0.58
SCARB2-208ENST00000638372 NAA38Q9BRA0 125 aaKnown RBP11.43□□□□□ -0.58
SCARB2-208ENST00000638372 RCHY1Q96PM5 261 aa11.43□□□□□ -0.58
SCARB2-208ENST00000638372 MRPL27Q9P0M9 148 aaKnown RBP11.43□□□□□ -0.58
SCARB2-208ENST00000638372 A0A1B0GWB2 263 aa11.43□□□□□ -0.58
SCARB2-208ENST00000638372 H3BRM9 83 aa11.43□□□□□ -0.58
SCARB2-208ENST00000638372 MSMPQ1L6U9 139 aa11.43□□□□□ -0.58
SCARB2-208ENST00000638372 ZNF815PA8K554 130 aa11.42□□□□□ -0.58
SCARB2-208ENST00000638372 SYS1-DBNDD2H3BUS1 97 aa11.42□□□□□ -0.58
SCARB2-208ENST00000638372 IL17RELQ6ZVW7 336 aa11.42□□□□□ -0.58
SCARB2-208ENST00000638372 C18orf32Q8TCD1 76 aa11.42□□□□□ -0.58
SCARB2-208ENST00000638372 DPH3P1Q9H4G8 78 aa11.42□□□□□ -0.58
SCARB2-208ENST00000638372 PLA2G2EQ9NZK7 142 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms