RNA–Protein interactions for RNA: ENST00000638144.1

CLN6-225, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 576 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-225ENST00000638144 ZNF503Q96F45 646 aa9.03□□□□□ -0.96
CLN6-225ENST00000638144 PHYHIPLQ96FC7 376 aa9.03□□□□□ -0.96
CLN6-225ENST00000638144 PAXXQ9BUH6 204 aa9.03□□□□□ -0.96
CLN6-225ENST00000638144 MRPL32Q9BYC8 188 aaKnown RBP9.03□□□□□ -0.96
CLN6-225ENST00000638144 SH3BGRL3Q9H299 93 aa9.03□□□□□ -0.96
CLN6-225ENST00000638144 TNFSF18Q9UNG2 199 aa9.03□□□□□ -0.96
CLN6-225ENST00000638144 TIMM9Q9Y5J7 89 aa9.03□□□□□ -0.96
CLN6-225ENST00000638144 RYR3Q15413 4870 aa9.02□□□□□ -0.96
CLN6-225ENST00000638144 J3KRW8 73 aa9.02□□□□□ -0.97
CLN6-225ENST00000638144 HMGB3O15347 200 aaKnown RBP9.02□□□□□ -0.97
CLN6-225ENST00000638144 CRXO43186 299 aaPredicted RBP9.02□□□□□ -0.97
CLN6-225ENST00000638144 UBE2L3P68036 154 aaKnown RBP9.02□□□□□ -0.97
CLN6-225ENST00000638144 ERCC8Q13216 396 aa9.02□□□□□ -0.97
CLN6-225ENST00000638144 GUK1Q16774 197 aa9.02□□□□□ -0.97
CLN6-225ENST00000638144 INO80EQ8NBZ0 244 aaPredicted RBP9.02□□□□□ -0.97
CLN6-225ENST00000638144 ASB13Q8WXK3 278 aa9.02□□□□□ -0.97
CLN6-225ENST00000638144 TMEM208Q9BTX3 173 aa9.02□□□□□ -0.97
CLN6-225ENST00000638144 OR51M1Q9H341 326 aa9.02□□□□□ -0.97
CLN6-225ENST00000638144 PPP1R14DQ9NXH3 145 aa9.02□□□□□ -0.97
CLN6-225ENST00000638144 GOLT1BQ9Y3E0 138 aa9.02□□□□□ -0.97
CLN6-225ENST00000638144 ARPC5O15511 151 aa9.01□□□□□ -0.97
CLN6-225ENST00000638144 INSP01308 110 aa9.01□□□□□ -0.97
CLN6-225ENST00000638144 ATP6V0CP27449 155 aa9.01□□□□□ -0.97
CLN6-225ENST00000638144 ZNF266Q14584 549 aa9.01□□□□□ -0.97
CLN6-225ENST00000638144 ICAM4Q14773 271 aa9.01□□□□□ -0.97
CLN6-225ENST00000638144 RPL7L1Q6DKI1 246 aaKnown RBP9.01□□□□□ -0.97
CLN6-225ENST00000638144 OR10J6PQ8NGY7 276 aa9.01□□□□□ -0.97
CLN6-225ENST00000638144 PHLDA1Q8WV24 401 aaPredicted RBP9.01□□□□□ -0.97
CLN6-225ENST00000638144 IGF2BP2-AS1Q96M15 143 aa9.01□□□□□ -0.97
CLN6-225ENST00000638144 ALMS1Q8TCU4 4167 aa9.01□□□□□ -0.97
CLN6-225ENST00000638144 IGKV2-40A0A087WW87 121 aaPredicted RBP9□□□□□ -0.97
CLN6-225ENST00000638144 ZNF705GA8MUZ8 300 aaPredicted RBP9□□□□□ -0.97
CLN6-225ENST00000638144 IGKV2D-40P01614 121 aaPredicted RBP9□□□□□ -0.97
CLN6-225ENST00000638144 NBEAP1P0C6P0 100 aa9□□□□□ -0.97
CLN6-225ENST00000638144 ACOT6Q3I5F7 207 aaPredicted RBP9□□□□□ -0.97
CLN6-225ENST00000638144 KHDC3LQ587J8 217 aa9□□□□□ -0.97
CLN6-225ENST00000638144 RPP25LQ8N5L8 163 aaKnown RBP9□□□□□ -0.97
CLN6-225ENST00000638144 RNF141Q8WVD5 230 aa9□□□□□ -0.97
CLN6-225ENST00000638144 PLECQ15149 4684 aaKnown RBP9□□□□□ -0.97
CLN6-225ENST00000638144 LOC102723971A0A1B0GUV8 181 aa8.99□□□□□ -0.97
CLN6-225ENST00000638144 ZNF253O75346 499 aa8.99□□□□□ -0.97
CLN6-225ENST00000638144 CT45A10P0DMU9 189 aa8.99□□□□□ -0.97
CLN6-225ENST00000638144 M6PRP20645 277 aa8.99□□□□□ -0.97
CLN6-225ENST00000638144 RANP62826 216 aaKnown RBP8.99□□□□□ -0.97
CLN6-225ENST00000638144 PDE6HQ13956 83 aa8.99□□□□□ -0.97
CLN6-225ENST00000638144 CEMP1Q6PRD7 247 aaPredicted RBP8.99□□□□□ -0.97
CLN6-225ENST00000638144 Q6ZTC4 211 aa8.99□□□□□ -0.97
CLN6-225ENST00000638144 OR10G4Q8NGN3 311 aa8.99□□□□□ -0.97
CLN6-225ENST00000638144 OR10G9Q8NGN4 311 aa8.99□□□□□ -0.97
CLN6-225ENST00000638144 OR10G7Q8NGN6 311 aa8.99□□□□□ -0.97
CLN6-225ENST00000638144 PLA2G2EQ9NZK7 142 aa8.99□□□□□ -0.97
CLN6-225ENST00000638144 RYR2Q92736 4967 aa8.99□□□□□ -0.97
CLN6-225ENST00000638144 LCE6AA0A183 80 aa8.98□□□□□ -0.97
CLN6-225ENST00000638144 A0A1W2PPV4 95 aa8.98□□□□□ -0.97
CLN6-225ENST00000638144 NUPR2A6NF83 97 aa8.98□□□□□ -0.97
CLN6-225ENST00000638144 NPIPB6E9PJ23 425 aa8.98□□□□□ -0.97
CLN6-225ENST00000638144 HBE1P02100 147 aa8.98□□□□□ -0.97
CLN6-225ENST00000638144 AMBPP02760 352 aa8.98□□□□□ -0.97
CLN6-225ENST00000638144 HTN1P15515 57 aa8.98□□□□□ -0.97
CLN6-225ENST00000638144 CDC34P49427 236 aaPredicted RBP8.98□□□□□ -0.97
CLN6-225ENST00000638144 TAS2R45P59539 299 aa8.98□□□□□ -0.97
CLN6-225ENST00000638144 RRN3P1Q2M238 152 aa8.98□□□□□ -0.97
CLN6-225ENST00000638144 SSX7Q7RTT5 188 aa8.98□□□□□ -0.97
CLN6-225ENST00000638144 OR11H4Q8NGC9 324 aa8.98□□□□□ -0.97
CLN6-225ENST00000638144 NEU1Q99519 415 aa8.98□□□□□ -0.97
CLN6-225ENST00000638144 Q9H3A6 140 aa8.98□□□□□ -0.97
CLN6-225ENST00000638144 AAMDCQ9H7C9 122 aa8.98□□□□□ -0.97
CLN6-225ENST00000638144 SACSQ9NZJ4 4579 aa8.98□□□□□ -0.97
CLN6-225ENST00000638144 BORCS7-ASMTA0A0B4J1R7 106 aa8.97□□□□□ -0.97
CLN6-225ENST00000638144 ARL14EPLP0DKL9 152 aa8.97□□□□□ -0.97
CLN6-225ENST00000638144 CDKN1BP46527 198 aa8.97□□□□□ -0.97
CLN6-225ENST00000638144 C12orf74Q32Q52 190 aa8.97□□□□□ -0.97
CLN6-225ENST00000638144 GFI1BQ5VTD9 330 aa8.97□□□□□ -0.97
CLN6-225ENST00000638144 OR2G3Q8NGZ4 309 aa8.97□□□□□ -0.97
CLN6-225ENST00000638144 Q8TAT8 98 aa8.97□□□□□ -0.97
CLN6-225ENST00000638144 MRPL53Q96EL3 112 aaKnown RBP8.97□□□□□ -0.97
CLN6-225ENST00000638144 HYLS1Q96M11 299 aa8.97□□□□□ -0.97
CLN6-225ENST00000638144 LINC01587Q99440 93 aa8.97□□□□□ -0.97
CLN6-225ENST00000638144 VGLL1Q99990 258 aa8.97□□□□□ -0.97
CLN6-225ENST00000638144 PSMG3Q9BT73 122 aaPredicted RBP8.97□□□□□ -0.97
CLN6-225ENST00000638144 RPH3ALQ9UNE2 315 aa8.97□□□□□ -0.97
CLN6-225ENST00000638144 YTHDF2Q9Y5A9 579 aaKnown RBP8.97□□□□□ -0.97
CLN6-225ENST00000638144 DNAH1Q9P2D7 4330 aa8.96□□□□□ -0.97
CLN6-225ENST00000638144 hCG_2014768A0A024R1R8 64 aa8.96□□□□□ -0.98
CLN6-225ENST00000638144 SMIM9A6NGZ8 99 aa8.96□□□□□ -0.98
CLN6-225ENST00000638144 AZU1P20160 251 aa8.96□□□□□ -0.98
CLN6-225ENST00000638144 FAM222AQ5U5X8 452 aa8.96□□□□□ -0.98
CLN6-225ENST00000638144 AGPAT4-IT1Q9H0P7 198 aa8.96□□□□□ -0.98
CLN6-225ENST00000638144 CYTL1Q9NRR1 136 aa8.96□□□□□ -0.98
CLN6-225ENST00000638144 PRELID1Q9Y255 219 aa8.96□□□□□ -0.98
CLN6-225ENST00000638144 TRAV12-3A0A0B4J271 114 aa8.95□□□□□ -0.98
CLN6-225ENST00000638144 RAB24Q969Q5 203 aa8.95□□□□□ -0.98
CLN6-225ENST00000638144 JTBO76095 146 aa8.94□□□□□ -0.98
CLN6-225ENST00000638144 STAG3L2P0CL84 134 aa8.94□□□□□ -0.98
CLN6-225ENST00000638144 STAG3L3P0CL85 134 aa8.94□□□□□ -0.98
CLN6-225ENST00000638144 TSPOP30536 169 aa8.94□□□□□ -0.98
CLN6-225ENST00000638144 LEPP41159 167 aa8.94□□□□□ -0.98
CLN6-225ENST00000638144 GNG5P63218 68 aa8.94□□□□□ -0.98
CLN6-225ENST00000638144 CD300CQ08708 224 aa8.94□□□□□ -0.98
CLN6-225ENST00000638144 BTN1A1Q13410 526 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms