RNA–Protein interactions for RNA: ENST00000638114.1

CACNA1A-259, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 517 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-259ENST00000638114 OR10J6PQ8NGY7 276 aa11.94□□□□□ -0.5
CACNA1A-259ENST00000638114 SAT2Q96F10 170 aaPredicted RBP11.94□□□□□ -0.5
CACNA1A-259ENST00000638114 PRAC2D3DTV9 90 aa11.93□□□□□ -0.5
CACNA1A-259ENST00000638114 CDKN1BP46527 198 aa11.93□□□□□ -0.5
CACNA1A-259ENST00000638114 H2BFSP57053 126 aa11.93□□□□□ -0.5
CACNA1A-259ENST00000638114 DAD1P61803 113 aa11.93□□□□□ -0.5
CACNA1A-259ENST00000638114 LINC01587Q99440 93 aa11.93□□□□□ -0.5
CACNA1A-259ENST00000638114 ZNF586Q9NXT0 402 aa11.93□□□□□ -0.5
CACNA1A-259ENST00000638114 OXA1LQ15070 435 aa11.92□□□□□ -0.5
CACNA1A-259ENST00000638114 GCSAMLQ5JQS6 135 aa11.92□□□□□ -0.5
CACNA1A-259ENST00000638114 TMEM256Q8N2U0 113 aa11.92□□□□□ -0.5
CACNA1A-259ENST00000638114 PPP1R1CQ8WVI7 109 aa11.92□□□□□ -0.5
CACNA1A-259ENST00000638114 DNAH6Q9C0G6 4158 aa11.91□□□□□ -0.5
CACNA1A-259ENST00000638114 HTN1P15515 57 aa11.91□□□□□ -0.5
CACNA1A-259ENST00000638114 AZU1P20160 251 aa11.91□□□□□ -0.5
CACNA1A-259ENST00000638114 TSPOP30536 169 aa11.91□□□□□ -0.5
CACNA1A-259ENST00000638114 PARD6GQ9BYG4 376 aaPredicted RBP11.91□□□□□ -0.5
CACNA1A-259ENST00000638114 TMEM14CQ9P0S9 112 aa11.91□□□□□ -0.5
CACNA1A-259ENST00000638114 TRBV19A0A075B6N1 114 aa11.9□□□□□ -0.5
CACNA1A-259ENST00000638114 LYRM9A8MSI8 78 aa11.9□□□□□ -0.5
CACNA1A-259ENST00000638114 ZNF253O75346 499 aa11.9□□□□□ -0.5
CACNA1A-259ENST00000638114 PET100P0DJ07 73 aa11.9□□□□□ -0.5
CACNA1A-259ENST00000638114 PYYP10082 97 aa11.9□□□□□ -0.5
CACNA1A-259ENST00000638114 HIST1H1EP10412 219 aaKnown RBP11.9□□□□□ -0.5
CACNA1A-259ENST00000638114 TAS2R60P59551 318 aa11.9□□□□□ -0.5
CACNA1A-259ENST00000638114 FAM210BQ96KR6 192 aa11.9□□□□□ -0.5
CACNA1A-259ENST00000638114 WDR61Q9GZS3 305 aaKnown RBP11.9□□□□□ -0.5
CACNA1A-259ENST00000638114 KCNIP2Q9NS61 270 aa11.9□□□□□ -0.5
CACNA1A-259ENST00000638114 TIMM9Q9Y5J7 89 aa11.9□□□□□ -0.5
CACNA1A-259ENST00000638114 MPC2O95563 127 aa11.89□□□□□ -0.51
CACNA1A-259ENST00000638114 P0DMU3 169 aa11.89□□□□□ -0.51
CACNA1A-259ENST00000638114 FAM231AP0DMU4 169 aa11.89□□□□□ -0.51
CACNA1A-259ENST00000638114 FAM231CP0DMU5 169 aa11.89□□□□□ -0.51
CACNA1A-259ENST00000638114 KIR3DS1Q14943 382 aa11.89□□□□□ -0.51
CACNA1A-259ENST00000638114 BLNKQ8WV28 456 aa11.89□□□□□ -0.51
CACNA1A-259ENST00000638114 FRAS1Q86XX4 4008 aa11.89□□□□□ -0.51
CACNA1A-259ENST00000638114 NPIPB6E9PJ23 425 aa11.88□□□□□ -0.51
CACNA1A-259ENST00000638114 C17orf112F2Z3M2 114 aa11.88□□□□□ -0.51
CACNA1A-259ENST00000638114 J3KRW8 73 aa11.88□□□□□ -0.51
CACNA1A-259ENST00000638114 M0R3E3 92 aa11.88□□□□□ -0.51
CACNA1A-259ENST00000638114 DEFB130BP0DP73 79 aa11.88□□□□□ -0.51
CACNA1A-259ENST00000638114 DEFB130AP0DP74 79 aa11.88□□□□□ -0.51
CACNA1A-259ENST00000638114 GFI1BQ5VTD9 330 aa11.88□□□□□ -0.51
CACNA1A-259ENST00000638114 MIR17HGQ75NE6 70 aa11.88□□□□□ -0.51
CACNA1A-259ENST00000638114 MRPL53Q96EL3 112 aaKnown RBP11.88□□□□□ -0.51
CACNA1A-259ENST00000638114 C16orf74Q96GX8 76 aa11.88□□□□□ -0.51
CACNA1A-259ENST00000638114 ATP5SQ99766 215 aa11.88□□□□□ -0.51
CACNA1A-259ENST00000638114 C20orf144Q9BQM9 153 aa11.88□□□□□ -0.51
CACNA1A-259ENST00000638114 SLC25A2Q9BXI2 301 aa11.88□□□□□ -0.51
CACNA1A-259ENST00000638114 DNAH10Q8IVF4 4471 aa11.88□□□□□ -0.51
CACNA1A-259ENST00000638114 PLAC8L1A1L4L8 177 aa11.87□□□□□ -0.51
CACNA1A-259ENST00000638114 H7BYZ3 331 aa11.87□□□□□ -0.51
CACNA1A-259ENST00000638114 NDUFB4O95168 129 aa11.87□□□□□ -0.51
CACNA1A-259ENST00000638114 CT45A10P0DMU9 189 aa11.87□□□□□ -0.51
CACNA1A-259ENST00000638114 LEPP41159 167 aa11.87□□□□□ -0.51
CACNA1A-259ENST00000638114 PDE6HQ13956 83 aa11.87□□□□□ -0.51
CACNA1A-259ENST00000638114 FCN2Q15485 313 aa11.87□□□□□ -0.51
CACNA1A-259ENST00000638114 PRELID1Q9Y255 219 aa11.87□□□□□ -0.51
CACNA1A-259ENST00000638114 HSPB11Q9Y547 144 aa11.87□□□□□ -0.51
CACNA1A-259ENST00000638114 RPL12P30050 165 aaKnown RBP11.86□□□□□ -0.51
CACNA1A-259ENST00000638114 TMEM88Q6PEY1 159 aa11.86□□□□□ -0.51
CACNA1A-259ENST00000638114 EXOC3-AS1Q8N2X6 119 aa11.86□□□□□ -0.51
CACNA1A-259ENST00000638114 POM121L12Q8N7R1 296 aa11.86□□□□□ -0.51
CACNA1A-259ENST00000638114 FAM167A-AS1Q96KT0 104 aa11.86□□□□□ -0.51
CACNA1A-259ENST00000638114 ODF3Q96PU9 254 aa11.86□□□□□ -0.51
CACNA1A-259ENST00000638114 MRPL32Q9BYC8 188 aaKnown RBP11.86□□□□□ -0.51
CACNA1A-259ENST00000638114 SMIM3Q9BZL3 60 aa11.86□□□□□ -0.51
CACNA1A-259ENST00000638114 AAMDCQ9H7C9 122 aa11.86□□□□□ -0.51
CACNA1A-259ENST00000638114 MBD2Q9UBB5 411 aa11.86□□□□□ -0.51
CACNA1A-259ENST00000638114 ERCC8Q13216 396 aa11.85□□□□□ -0.51
CACNA1A-259ENST00000638114 ZNF493Q6ZR52 646 aa11.85□□□□□ -0.51
CACNA1A-259ENST00000638114 UBE2DNLQ8IWF7 75 aa11.85□□□□□ -0.51
CACNA1A-259ENST00000638114 RNASE8Q8TDE3 154 aaKnown RBP11.85□□□□□ -0.51
CACNA1A-259ENST00000638114 TMEM263Q8WUH6 116 aaKnown RBP11.85□□□□□ -0.51
CACNA1A-259ENST00000638114 OR51M1Q9H341 326 aa11.85□□□□□ -0.51
CACNA1A-259ENST00000638114 TIMM8BQ9Y5J9 83 aaPredicted RBP11.85□□□□□ -0.51
CACNA1A-259ENST00000638114 TRAV12-3A0A0B4J271 114 aa11.84□□□□□ -0.51
CACNA1A-259ENST00000638114 IFNA5P01569 189 aa11.84□□□□□ -0.51
CACNA1A-259ENST00000638114 OR10J4P0C629 311 aa11.84□□□□□ -0.51
CACNA1A-259ENST00000638114 NBEAP1P0C6P0 100 aa11.84□□□□□ -0.51
CACNA1A-259ENST00000638114 ICAM4Q14773 271 aa11.84□□□□□ -0.51
CACNA1A-259ENST00000638114 FFAR4Q5NUL3 377 aa11.84□□□□□ -0.51
CACNA1A-259ENST00000638114 CCDC28AQ8IWP9 274 aa11.84□□□□□ -0.51
CACNA1A-259ENST00000638114 SCGB1C1Q8TD33 95 aa11.84□□□□□ -0.51
CACNA1A-259ENST00000638114 PAXXQ9BUH6 204 aa11.84□□□□□ -0.51
CACNA1A-259ENST00000638114 NOP10Q9NPE3 64 aaKnown RBP11.84□□□□□ -0.51
CACNA1A-259ENST00000638114 FUT9Q9Y231 359 aa11.84□□□□□ -0.51
CACNA1A-259ENST00000638114 ALG5Q9Y673 324 aa11.84□□□□□ -0.51
CACNA1A-259ENST00000638114 F5H768 121 aa11.83□□□□□ -0.52
CACNA1A-259ENST00000638114 OR7C2O60412 319 aa11.83□□□□□ -0.52
CACNA1A-259ENST00000638114 FAM122CQ6P4D5 195 aa11.83□□□□□ -0.52
CACNA1A-259ENST00000638114 IGKV2-40A0A087WW87 121 aaPredicted RBP11.82□□□□□ -0.52
CACNA1A-259ENST00000638114 PTTG1O95997 202 aa11.82□□□□□ -0.52
CACNA1A-259ENST00000638114 IGKV2D-40P01614 121 aaPredicted RBP11.82□□□□□ -0.52
CACNA1A-259ENST00000638114 ATP5G1P05496 136 aa11.82□□□□□ -0.52
CACNA1A-259ENST00000638114 ATP5G3P48201 142 aa11.82□□□□□ -0.52
CACNA1A-259ENST00000638114 RNF141Q8WVD5 230 aa11.82□□□□□ -0.52
CACNA1A-259ENST00000638114 FXYD5Q96DB9 178 aa11.82□□□□□ -0.52
CACNA1A-259ENST00000638114 LINC00477Q96M19 166 aa11.82□□□□□ -0.52
CACNA1A-259ENST00000638114 CBY3A6NI87 242 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms