RNA–Protein interactions for RNA: ENST00000637927.1

CACNA1A-253, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-253ENST00000637927 APOC4P55056 127 aa13.77□□□□□ -0.2
CACNA1A-253ENST00000637927 RBM3P98179 157 aaKnown RBP13.77□□□□□ -0.2
CACNA1A-253ENST00000637927 IGKV1-12A0A0C4DH73 117 aa13.77□□□□□ -0.21
CACNA1A-253ENST00000637927 NCR3O14931 201 aa13.77□□□□□ -0.21
CACNA1A-253ENST00000637927 ADAMTSL5Q6ZMM2 481 aa13.77□□□□□ -0.21
CACNA1A-253ENST00000637927 RNF144BQ7Z419 303 aa13.77□□□□□ -0.21
CACNA1A-253ENST00000637927 FLVCR1-AS1Q8TAF5 88 aa13.77□□□□□ -0.21
CACNA1A-253ENST00000637927 ZNF503Q96F45 646 aa13.77□□□□□ -0.21
CACNA1A-253ENST00000637927 MGST2Q99735 147 aa13.77□□□□□ -0.21
CACNA1A-253ENST00000637927 MRPS18CQ9Y3D5 142 aaKnown RBP13.77□□□□□ -0.21
CACNA1A-253ENST00000637927 TRPM7Q96QT4 1865 aa13.77□□□□□ -0.21
CACNA1A-253ENST00000637927 NPBQ8NG41 125 aa13.77□□□□□ -0.21
CACNA1A-253ENST00000637927 LIME1Q9H400 295 aa13.77□□□□□ -0.21
CACNA1A-253ENST00000637927 A0A096LNI7 61 aa13.76□□□□□ -0.21
CACNA1A-253ENST00000637927 RPP25LQ8N5L8 163 aaKnown RBP13.76□□□□□ -0.21
CACNA1A-253ENST00000637927 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.76□□□□□ -0.21
CACNA1A-253ENST00000637927 Q6AWC8 147 aa13.76□□□□□ -0.21
CACNA1A-253ENST00000637927 WIPF2Q8TF74 440 aaPredicted RBP13.76□□□□□ -0.21
CACNA1A-253ENST00000637927 GTSF1Q8WW33 167 aa13.76□□□□□ -0.21
CACNA1A-253ENST00000637927 CR1LQ2VPA4 569 aa13.76□□□□□ -0.21
CACNA1A-253ENST00000637927 FAM120AOSQ5T036 256 aa13.76□□□□□ -0.21
CACNA1A-253ENST00000637927 FREM3P0C091 2139 aa13.76□□□□□ -0.21
CACNA1A-253ENST00000637927 BUB1B-PAK6H3BSN5 160 aa13.76□□□□□ -0.21
CACNA1A-253ENST00000637927 SEM1Q6ZVN7 128 aa13.76□□□□□ -0.21
CACNA1A-253ENST00000637927 DOCK11Q5JSL3 2073 aa13.75□□□□□ -0.21
CACNA1A-253ENST00000637927 ATP6V0E1O15342 81 aa13.75□□□□□ -0.21
CACNA1A-253ENST00000637927 CSRP1P21291 193 aaKnown RBP13.75□□□□□ -0.21
CACNA1A-253ENST00000637927 UBE2AP49459 152 aa13.75□□□□□ -0.21
CACNA1A-253ENST00000637927 DSCR9P59020 149 aa13.75□□□□□ -0.21
CACNA1A-253ENST00000637927 NUP35Q8NFH5 326 aa13.75□□□□□ -0.21
CACNA1A-253ENST00000637927 SBF1O95248 1867 aa13.75□□□□□ -0.21
CACNA1A-253ENST00000637927 ARMS2P0C7Q2 107 aa13.75□□□□□ -0.21
CACNA1A-253ENST00000637927 KIR3DS1Q14943 382 aa13.75□□□□□ -0.21
CACNA1A-253ENST00000637927 RETNQ9HD89 108 aa13.75□□□□□ -0.21
CACNA1A-253ENST00000637927 GREB1LQ9C091 1923 aaPredicted RBP13.74□□□□□ -0.21
CACNA1A-253ENST00000637927 ATP5IP56385 69 aaPredicted RBP13.74□□□□□ -0.21
CACNA1A-253ENST00000637927 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.74□□□□□ -0.21
CACNA1A-253ENST00000637927 IGKV2-29A2NJV5 120 aaPredicted RBP13.74□□□□□ -0.21
CACNA1A-253ENST00000637927 MST1LQ2TV78 715 aa13.74□□□□□ -0.21
CACNA1A-253ENST00000637927 NRGNQ92686 78 aa13.74□□□□□ -0.21
CACNA1A-253ENST00000637927 HLA-DRB4P13762 266 aa13.74□□□□□ -0.21
CACNA1A-253ENST00000637927 HLA-DRB4X5D2U9 266 aa13.74□□□□□ -0.21
CACNA1A-253ENST00000637927 A0A0J9YWU9 116 aa13.74□□□□□ -0.21
CACNA1A-253ENST00000637927 IGLV3-19P01714 112 aa13.74□□□□□ -0.21
CACNA1A-253ENST00000637927 SPTA1P02549 2419 aa13.74□□□□□ -0.21
CACNA1A-253ENST00000637927 TEX36Q5VZQ5 186 aa13.73□□□□□ -0.21
CACNA1A-253ENST00000637927 GAFA1Q96PS6 74 aa13.73□□□□□ -0.21
CACNA1A-253ENST00000637927 MST1P26927 711 aa13.73□□□□□ -0.21
CACNA1A-253ENST00000637927 WIPF3A6NGB9 483 aa13.73□□□□□ -0.21
CACNA1A-253ENST00000637927 IL18BPO95998 194 aa13.73□□□□□ -0.21
CACNA1A-253ENST00000637927 PLSCR4Q9NRQ2 329 aa13.72□□□□□ -0.21
CACNA1A-253ENST00000637927 NTN3O00634 580 aaPredicted RBP13.72□□□□□ -0.21
CACNA1A-253ENST00000637927 C9orf47Q6ZRZ4 202 aa13.72□□□□□ -0.21
CACNA1A-253ENST00000637927 GFI1Q99684 422 aa13.72□□□□□ -0.21
CACNA1A-253ENST00000637927 TMEM243Q9BU79 118 aa13.72□□□□□ -0.21
CACNA1A-253ENST00000637927 F6UB75 175 aa13.72□□□□□ -0.21
CACNA1A-253ENST00000637927 RPRMLQ8N4K4 120 aa13.72□□□□□ -0.21
CACNA1A-253ENST00000637927 MPLKIPQ8TAP9 179 aa13.72□□□□□ -0.21
CACNA1A-253ENST00000637927 KIF26BQ2KJY2 2108 aa13.72□□□□□ -0.21
CACNA1A-253ENST00000637927 A0A1B0GW15 77 aa13.71□□□□□ -0.21
CACNA1A-253ENST00000637927 CMC4P56277 68 aaPredicted RBP13.71□□□□□ -0.21
CACNA1A-253ENST00000637927 HSD52Q0P140 79 aa13.71□□□□□ -0.21
CACNA1A-253ENST00000637927 FANCD2OSQ96PS1 177 aa13.71□□□□□ -0.21
CACNA1A-253ENST00000637927 IFI6P09912 130 aa13.71□□□□□ -0.21
CACNA1A-253ENST00000637927 TREML4Q6UXN2 200 aa13.71□□□□□ -0.21
CACNA1A-253ENST00000637927 TSKUQ8WUA8 353 aa13.71□□□□□ -0.21
CACNA1A-253ENST00000637927 TM2D2Q9BX73 214 aa13.71□□□□□ -0.21
CACNA1A-253ENST00000637927 NCOR1O75376 2440 aa13.71□□□□□ -0.21
CACNA1A-253ENST00000637927 LINC00587B1AMM8 73 aa13.71□□□□□ -0.21
CACNA1A-253ENST00000637927 H0YJW9 148 aa13.71□□□□□ -0.21
CACNA1A-253ENST00000637927 J3QKU1 62 aa13.71□□□□□ -0.21
CACNA1A-253ENST00000637927 ACYP1P07311 99 aa13.71□□□□□ -0.21
CACNA1A-253ENST00000637927 C5orf38Q86SI9 138 aa13.71□□□□□ -0.21
CACNA1A-253ENST00000637927 WDR86Q86TI4 376 aa13.71□□□□□ -0.22
CACNA1A-253ENST00000637927 ABCA4P78363 2273 aa13.71□□□□□ -0.22
CACNA1A-253ENST00000637927 C1orf43Q9BWL3 253 aa13.7□□□□□ -0.22
CACNA1A-253ENST00000637927 LRRK1Q38SD2 2015 aa13.7□□□□□ -0.22
CACNA1A-253ENST00000637927 DUX4L9Q6RFH8 374 aaPredicted RBP13.7□□□□□ -0.22
CACNA1A-253ENST00000637927 H0Y9J4 135 aa13.7□□□□□ -0.22
CACNA1A-253ENST00000637927 LINC00271P0C7V0 271 aa13.7□□□□□ -0.22
CACNA1A-253ENST00000637927 LY6G5BQ8NDX9 201 aa13.7□□□□□ -0.22
CACNA1A-253ENST00000637927 C15orf53Q8NAA6 179 aa13.7□□□□□ -0.22
CACNA1A-253ENST00000637927 IGLV3-12A0A075B6K2 115 aa13.7□□□□□ -0.22
CACNA1A-253ENST00000637927 MSMBP08118 114 aa13.7□□□□□ -0.22
CACNA1A-253ENST00000637927 CXCL1P09341 107 aa13.7□□□□□ -0.22
CACNA1A-253ENST00000637927 BTCP35070 178 aa13.7□□□□□ -0.22
CACNA1A-253ENST00000637927 TICRRQ7Z2Z1 1910 aa13.7□□□□□ -0.22
CACNA1A-253ENST00000637927 IGLL5B9A064 214 aa13.7□□□□□ -0.22
CACNA1A-253ENST00000637927 TEX22C9J3V5 150 aa13.7□□□□□ -0.22
CACNA1A-253ENST00000637927 E7EQL1 145 aa13.7□□□□□ -0.22
CACNA1A-253ENST00000637927 A8MWP6 167 aa13.69□□□□□ -0.22
CACNA1A-253ENST00000637927 HIST2H2BDQ6DRA6 164 aa13.69□□□□□ -0.22
CACNA1A-253ENST00000637927 ZDBF2Q9HCK1 2354 aa13.69□□□□□ -0.22
CACNA1A-253ENST00000637927 A0A1B0GUS0 222 aa13.69□□□□□ -0.22
CACNA1A-253ENST00000637927 H0YIZ8 118 aa13.69□□□□□ -0.22
CACNA1A-253ENST00000637927 GNB1LQ9BYB4 327 aa13.69□□□□□ -0.22
CACNA1A-253ENST00000637927 PHF3Q92576 2039 aaKnown RBP13.69□□□□□ -0.22
CACNA1A-253ENST00000637927 SHISA9B4DS77 424 aa13.69□□□□□ -0.22
CACNA1A-253ENST00000637927 K7ERJ3 54 aa13.69□□□□□ -0.22
CACNA1A-253ENST00000637927 SLC25A48Q6ZT89 311 aaKnown RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 173.9 ms