RNA–Protein interactions for RNA: ENST00000637667.1

CLN6-222, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 874 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-222ENST00000637667 TIMM8BQ9Y5J9 83 aaPredicted RBP14.12□□□□□ -0.15
CLN6-222ENST00000637667 NACAE9PAV3 2078 aa14.11□□□□□ -0.15
CLN6-222ENST00000637667 TRAV5A0A0B4J249 113 aa14.11□□□□□ -0.15
CLN6-222ENST00000637667 KIR3DS1Q14943 382 aa14.11□□□□□ -0.15
CLN6-222ENST00000637667 VWC2Q2TAL6 325 aa14.11□□□□□ -0.15
CLN6-222ENST00000637667 RNASE8Q8TDE3 154 aaKnown RBP14.11□□□□□ -0.15
CLN6-222ENST00000637667 SAT2Q96F10 170 aaPredicted RBP14.11□□□□□ -0.15
CLN6-222ENST00000637667 C20orf144Q9BQM9 153 aa14.11□□□□□ -0.15
CLN6-222ENST00000637667 ATG101Q9BSB4 218 aa14.11□□□□□ -0.15
CLN6-222ENST00000637667 PARD6GQ9BYG4 376 aaPredicted RBP14.11□□□□□ -0.15
CLN6-222ENST00000637667 LYRM2Q9NU23 88 aaPredicted RBP14.11□□□□□ -0.15
CLN6-222ENST00000637667 UBE2L5PA0A1B0GUS4 154 aa14.1□□□□□ -0.15
CLN6-222ENST00000637667 IGSF23A1L1A6 192 aa14.1□□□□□ -0.15
CLN6-222ENST00000637667 SULT1A1P50225 295 aa14.1□□□□□ -0.15
CLN6-222ENST00000637667 IL15RAQ13261 267 aa14.1□□□□□ -0.15
CLN6-222ENST00000637667 GUK1Q16774 197 aa14.1□□□□□ -0.15
CLN6-222ENST00000637667 SOHLH1Q5JUK2 328 aa14.1□□□□□ -0.15
CLN6-222ENST00000637667 TMEM263Q8WUH6 116 aaKnown RBP14.1□□□□□ -0.15
CLN6-222ENST00000637667 PFDN5Q99471 154 aa14.1□□□□□ -0.15
CLN6-222ENST00000637667 NOP10Q9NPE3 64 aaKnown RBP14.1□□□□□ -0.15
CLN6-222ENST00000637667 SLC39A9Q9NUM3 307 aa14.1□□□□□ -0.15
CLN6-222ENST00000637667 DYNC1H1Q14204 4646 aaKnown RBP14.1□□□□□ -0.15
CLN6-222ENST00000637667 FAM240BA0A1B0GVZ2 78 aa14.09□□□□□ -0.15
CLN6-222ENST00000637667 S100A11P31949 105 aa14.09□□□□□ -0.15
CLN6-222ENST00000637667 RPL29P47914 159 aaKnown RBP14.09□□□□□ -0.15
CLN6-222ENST00000637667 BAXQ07812 192 aa14.09□□□□□ -0.15
CLN6-222ENST00000637667 RAB32Q13637 225 aa14.09□□□□□ -0.15
CLN6-222ENST00000637667 GFI1BQ5VTD9 330 aa14.09□□□□□ -0.15
CLN6-222ENST00000637667 STX12Q86Y82 276 aa14.09□□□□□ -0.15
CLN6-222ENST00000637667 TMEM252Q8N6L7 170 aa14.09□□□□□ -0.15
CLN6-222ENST00000637667 NUDT3O95989 172 aa14.08□□□□□ -0.16
CLN6-222ENST00000637667 HBG1P69891 147 aa14.08□□□□□ -0.16
CLN6-222ENST00000637667 HBG2P69892 147 aa14.08□□□□□ -0.16
CLN6-222ENST00000637667 C1orf134Q5TEV5 83 aa14.08□□□□□ -0.16
CLN6-222ENST00000637667 CHAC2Q8WUX2 184 aa14.08□□□□□ -0.16
CLN6-222ENST00000637667 ZNF586Q9NXT0 402 aa14.08□□□□□ -0.16
CLN6-222ENST00000637667 CT45A10P0DMU9 189 aa14.07□□□□□ -0.16
CLN6-222ENST00000637667 CCDC28AQ8IWP9 274 aa14.07□□□□□ -0.16
CLN6-222ENST00000637667 ODF3Q96PU9 254 aa14.07□□□□□ -0.16
CLN6-222ENST00000637667 NPIPB6E9PJ23 425 aa14.06□□□□□ -0.16
CLN6-222ENST00000637667 ZNF253O75346 499 aa14.06□□□□□ -0.16
CLN6-222ENST00000637667 FGF7P21781 194 aa14.06□□□□□ -0.16
CLN6-222ENST00000637667 LEPP41159 167 aa14.06□□□□□ -0.16
CLN6-222ENST00000637667 ATP6V1FQ16864 119 aa14.06□□□□□ -0.16
CLN6-222ENST00000637667 MZT2BQ6NZ67 158 aa14.06□□□□□ -0.16
CLN6-222ENST00000637667 RNF141Q8WVD5 230 aa14.06□□□□□ -0.16
CLN6-222ENST00000637667 J3KRW8 73 aa14.05□□□□□ -0.16
CLN6-222ENST00000637667 LINC00612Q8N6U2 182 aa14.05□□□□□ -0.16
CLN6-222ENST00000637667 ZNRF2Q8NHG8 242 aa14.05□□□□□ -0.16
CLN6-222ENST00000637667 GPN1Q9HCN4 374 aaPredicted RBP14.05□□□□□ -0.16
CLN6-222ENST00000637667 PKD1P98161 4303 aa14.04□□□□□ -0.16
CLN6-222ENST00000637667 TRBV19A0A075B6N1 114 aa14.04□□□□□ -0.16
CLN6-222ENST00000637667 MED14OSP0DP75 135 aa14.04□□□□□ -0.16
CLN6-222ENST00000637667 CCL18P55774 89 aa14.04□□□□□ -0.16
CLN6-222ENST00000637667 ASAH1Q13510 395 aa14.04□□□□□ -0.16
CLN6-222ENST00000637667 LINC00299Q6ZSB3 139 aa14.04□□□□□ -0.16
CLN6-222ENST00000637667 MRPL53Q96EL3 112 aaKnown RBP14.04□□□□□ -0.16
CLN6-222ENST00000637667 TMEM14CQ9P0S9 112 aa14.04□□□□□ -0.16
CLN6-222ENST00000637667 TRAV12-3A0A0B4J271 114 aa14.03□□□□□ -0.16
CLN6-222ENST00000637667 M0R3E3 92 aa14.03□□□□□ -0.16
CLN6-222ENST00000637667 MPDU1O75352 247 aa14.03□□□□□ -0.16
CLN6-222ENST00000637667 NBDYA0A0U1RRE5 68 aa14.02□□□□□ -0.17
CLN6-222ENST00000637667 NDUFB4O95168 129 aa14.02□□□□□ -0.17
CLN6-222ENST00000637667 HIST1H1EP10412 219 aaKnown RBP14.02□□□□□ -0.17
CLN6-222ENST00000637667 CLINT1Q14677 625 aa14.02□□□□□ -0.17
CLN6-222ENST00000637667 S100ZQ8WXG8 99 aa14.02□□□□□ -0.17
CLN6-222ENST00000637667 PYGO2Q9BRQ0 406 aa14.02□□□□□ -0.17
CLN6-222ENST00000637667 NPCDR1Q9BY65 106 aa14.02□□□□□ -0.17
CLN6-222ENST00000637667 LINC00588Q9Y4M8 146 aa14.02□□□□□ -0.17
CLN6-222ENST00000637667 GAGE12BA1L429 117 aa14.01□□□□□ -0.17
CLN6-222ENST00000637667 SNURFLB1AK76 121 aa14.01□□□□□ -0.17
CLN6-222ENST00000637667 GAGE7O76087 117 aa14.01□□□□□ -0.17
CLN6-222ENST00000637667 RLN2P04090 185 aa14.01□□□□□ -0.17
CLN6-222ENST00000637667 GAGE12FP0CL80 117 aa14.01□□□□□ -0.17
CLN6-222ENST00000637667 GAGE12GP0CL81 117 aa14.01□□□□□ -0.17
CLN6-222ENST00000637667 GAGE12IP0CL82 117 aa14.01□□□□□ -0.17
CLN6-222ENST00000637667 PYYP10082 97 aa14.01□□□□□ -0.17
CLN6-222ENST00000637667 ERCC8Q13216 396 aa14.01□□□□□ -0.17
CLN6-222ENST00000637667 OR5I1Q13606 314 aa14.01□□□□□ -0.17
CLN6-222ENST00000637667 PDE6HQ13956 83 aa14.01□□□□□ -0.17
CLN6-222ENST00000637667 GCSAMLQ5JQS6 135 aa14.01□□□□□ -0.17
CLN6-222ENST00000637667 PRELID1Q9Y255 219 aa14.01□□□□□ -0.17
CLN6-222ENST00000637667 TIMM9Q9Y5J7 89 aa14.01□□□□□ -0.17
CLN6-222ENST00000637667 TRAV26-1A0A087WT03 109 aa14□□□□□ -0.17
CLN6-222ENST00000637667 SLC25A5P05141 298 aaKnown RBP14□□□□□ -0.17
CLN6-222ENST00000637667 M6PRP20645 277 aa14□□□□□ -0.17
CLN6-222ENST00000637667 GNPNAT1Q96EK6 184 aaPredicted RBP14□□□□□ -0.17
CLN6-222ENST00000637667 C7orf71A4D174 169 aa13.99□□□□□ -0.17
CLN6-222ENST00000637667 SIX6O95475 246 aa13.99□□□□□ -0.17
CLN6-222ENST00000637667 NHLH2Q02577 135 aa13.99□□□□□ -0.17
CLN6-222ENST00000637667 DAZ2Q13117 558 aaKnown RBP13.99□□□□□ -0.17
CLN6-222ENST00000637667 SSX7Q7RTT5 188 aa13.99□□□□□ -0.17
CLN6-222ENST00000637667 THAP6Q8TBB0 222 aa13.99□□□□□ -0.17
CLN6-222ENST00000637667 ENKURQ8TC29 256 aa13.99□□□□□ -0.17
CLN6-222ENST00000637667 RXFP4Q8TDU9 374 aa13.99□□□□□ -0.17
CLN6-222ENST00000637667 BLNKQ8WV28 456 aa13.99□□□□□ -0.17
CLN6-222ENST00000637667 SLC25A31Q9H0C2 315 aa13.99□□□□□ -0.17
CLN6-222ENST00000637667 MUC4Q99102 2169 aa13.98□□□□□ -0.17
CLN6-222ENST00000637667 KLLNB2CW77 178 aa13.98□□□□□ -0.17
CLN6-222ENST00000637667 E5RGE8 158 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms