RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 KCNIP2Q9NS61 270 aa9.87□□□□□ -0.83
PNKP-228ENST00000637325 C17orf112F2Z3M2 114 aa9.86□□□□□ -0.83
PNKP-228ENST00000637325 MPC2O95563 127 aa9.86□□□□□ -0.83
PNKP-228ENST00000637325 HTN3P15516 51 aa9.86□□□□□ -0.83
PNKP-228ENST00000637325 TSPOP30536 169 aa9.86□□□□□ -0.83
PNKP-228ENST00000637325 CDKN1BP46527 198 aa9.86□□□□□ -0.83
PNKP-228ENST00000637325 DAD1P61803 113 aa9.86□□□□□ -0.83
PNKP-228ENST00000637325 TMEM256Q8N2U0 113 aa9.86□□□□□ -0.83
PNKP-228ENST00000637325 SAT2Q96F10 170 aaPredicted RBP9.86□□□□□ -0.83
PNKP-228ENST00000637325 NDUFAF3Q9BU61 184 aa9.86□□□□□ -0.83
PNKP-228ENST00000637325 ZNF586Q9NXT0 402 aa9.86□□□□□ -0.83
PNKP-228ENST00000637325 PLA2G2EQ9NZK7 142 aa9.86□□□□□ -0.83
PNKP-228ENST00000637325 TMEM14CQ9P0S9 112 aa9.86□□□□□ -0.83
PNKP-228ENST00000637325 TIMM9Q9Y5J7 89 aa9.86□□□□□ -0.83
PNKP-228ENST00000637325 PRAC2D3DTV9 90 aa9.85□□□□□ -0.83
PNKP-228ENST00000637325 PRM2P04554 102 aa9.85□□□□□ -0.83
PNKP-228ENST00000637325 HIST1H1EP10412 219 aaKnown RBP9.85□□□□□ -0.83
PNKP-228ENST00000637325 HTN1P15515 57 aa9.85□□□□□ -0.83
PNKP-228ENST00000637325 GCSAMLQ5JQS6 135 aa9.85□□□□□ -0.83
PNKP-228ENST00000637325 BLNKQ8WV28 456 aa9.85□□□□□ -0.83
PNKP-228ENST00000637325 ATP5SQ99766 215 aa9.85□□□□□ -0.83
PNKP-228ENST00000637325 WDR61Q9GZS3 305 aaKnown RBP9.85□□□□□ -0.83
PNKP-228ENST00000637325 EPPK1P58107 5090 aaKnown RBP9.85□□□□□ -0.83
PNKP-228ENST00000637325 ZNF253O75346 499 aa9.84□□□□□ -0.83
PNKP-228ENST00000637325 PYYP10082 97 aa9.84□□□□□ -0.83
PNKP-228ENST00000637325 TAS2R60P59551 318 aa9.84□□□□□ -0.83
PNKP-228ENST00000637325 OXA1LQ15070 435 aa9.84□□□□□ -0.83
PNKP-228ENST00000637325 SCGB1C1Q8TD33 95 aa9.84□□□□□ -0.83
PNKP-228ENST00000637325 HSPB11Q9Y547 144 aa9.84□□□□□ -0.83
PNKP-228ENST00000637325 TRBV19A0A075B6N1 114 aa9.83□□□□□ -0.84
PNKP-228ENST00000637325 LYRM9A8MSI8 78 aa9.83□□□□□ -0.84
PNKP-228ENST00000637325 IFNA5P01569 189 aa9.83□□□□□ -0.84
PNKP-228ENST00000637325 AZU1P20160 251 aa9.83□□□□□ -0.84
PNKP-228ENST00000637325 RPL12P30050 165 aaKnown RBP9.83□□□□□ -0.84
PNKP-228ENST00000637325 LEPP41159 167 aa9.83□□□□□ -0.84
PNKP-228ENST00000637325 MIR17HGQ75NE6 70 aa9.83□□□□□ -0.84
PNKP-228ENST00000637325 SLC25A2Q9BXI2 301 aa9.83□□□□□ -0.84
PNKP-228ENST00000637325 PARD6GQ9BYG4 376 aaPredicted RBP9.83□□□□□ -0.84
PNKP-228ENST00000637325 SMIM3Q9BZL3 60 aa9.83□□□□□ -0.84
PNKP-228ENST00000637325 AAMDCQ9H7C9 122 aa9.83□□□□□ -0.84
PNKP-228ENST00000637325 MBD2Q9UBB5 411 aa9.83□□□□□ -0.84
PNKP-228ENST00000637325 PRELID1Q9Y255 219 aa9.83□□□□□ -0.84
PNKP-228ENST00000637325 ALG5Q9Y673 324 aa9.83□□□□□ -0.84
PNKP-228ENST00000637325 J3KRW8 73 aa9.82□□□□□ -0.84
PNKP-228ENST00000637325 PDE6HQ13956 83 aa9.82□□□□□ -0.84
PNKP-228ENST00000637325 MRPL53Q96EL3 112 aaKnown RBP9.82□□□□□ -0.84
PNKP-228ENST00000637325 C16orf74Q96GX8 76 aa9.82□□□□□ -0.84
PNKP-228ENST00000637325 FAM210BQ96KR6 192 aa9.82□□□□□ -0.84
PNKP-228ENST00000637325 C20orf144Q9BQM9 153 aa9.82□□□□□ -0.84
PNKP-228ENST00000637325 MRPL32Q9BYC8 188 aaKnown RBP9.82□□□□□ -0.84
PNKP-228ENST00000637325 OR51M1Q9H341 326 aa9.82□□□□□ -0.84
PNKP-228ENST00000637325 DNAH10Q8IVF4 4471 aa9.82□□□□□ -0.84
PNKP-228ENST00000637325 H7BYZ3 331 aa9.81□□□□□ -0.84
PNKP-228ENST00000637325 M0R3E3 92 aa9.81□□□□□ -0.84
PNKP-228ENST00000637325 PTTG1O95997 202 aa9.81□□□□□ -0.84
PNKP-228ENST00000637325 P0DMU3 169 aa9.81□□□□□ -0.84
PNKP-228ENST00000637325 FAM231AP0DMU4 169 aa9.81□□□□□ -0.84
PNKP-228ENST00000637325 FAM231CP0DMU5 169 aa9.81□□□□□ -0.84
PNKP-228ENST00000637325 CT45A10P0DMU9 189 aa9.81□□□□□ -0.84
PNKP-228ENST00000637325 DEFB130BP0DP73 79 aa9.81□□□□□ -0.84
PNKP-228ENST00000637325 DEFB130AP0DP74 79 aa9.81□□□□□ -0.84
PNKP-228ENST00000637325 FFAR4Q5NUL3 377 aa9.81□□□□□ -0.84
PNKP-228ENST00000637325 CCDC28AQ8IWP9 274 aa9.81□□□□□ -0.84
PNKP-228ENST00000637325 EXOC3-AS1Q8N2X6 119 aa9.81□□□□□ -0.84
PNKP-228ENST00000637325 ODF3Q96PU9 254 aa9.81□□□□□ -0.84
PNKP-228ENST00000637325 PAXXQ9BUH6 204 aa9.81□□□□□ -0.84
PNKP-228ENST00000637325 FUT9Q9Y231 359 aa9.81□□□□□ -0.84
PNKP-228ENST00000637325 NPIPB6E9PJ23 425 aa9.8□□□□□ -0.84
PNKP-228ENST00000637325 OR7C2O60412 319 aa9.8□□□□□ -0.84
PNKP-228ENST00000637325 NDUFB4O95168 129 aa9.8□□□□□ -0.84
PNKP-228ENST00000637325 NBEAP1P0C6P0 100 aa9.8□□□□□ -0.84
PNKP-228ENST00000637325 ERCC8Q13216 396 aa9.8□□□□□ -0.84
PNKP-228ENST00000637325 ICAM4Q14773 271 aa9.8□□□□□ -0.84
PNKP-228ENST00000637325 KIR3DS1Q14943 382 aa9.8□□□□□ -0.84
PNKP-228ENST00000637325 FCN2Q15485 313 aa9.8□□□□□ -0.84
PNKP-228ENST00000637325 GFI1BQ5VTD9 330 aa9.8□□□□□ -0.84
PNKP-228ENST00000637325 ZNF493Q6ZR52 646 aa9.8□□□□□ -0.84
PNKP-228ENST00000637325 FAM167A-AS1Q96KT0 104 aa9.8□□□□□ -0.84
PNKP-228ENST00000637325 MED28Q9H204 178 aa9.8□□□□□ -0.84
PNKP-228ENST00000637325 TIMM8BQ9Y5J9 83 aaPredicted RBP9.8□□□□□ -0.84
PNKP-228ENST00000637325 FRAS1Q86XX4 4008 aa9.79□□□□□ -0.84
PNKP-228ENST00000637325 OR10J4P0C629 311 aa9.79□□□□□ -0.84
PNKP-228ENST00000637325 FAM122CQ6P4D5 195 aa9.79□□□□□ -0.84
PNKP-228ENST00000637325 UBE2DNLQ8IWF7 75 aa9.79□□□□□ -0.84
PNKP-228ENST00000637325 TMEM263Q8WUH6 116 aaKnown RBP9.79□□□□□ -0.84
PNKP-228ENST00000637325 RNF141Q8WVD5 230 aa9.79□□□□□ -0.84
PNKP-228ENST00000637325 LINC00477Q96M19 166 aa9.79□□□□□ -0.84
PNKP-228ENST00000637325 BIRC6Q9NR09 4857 aa9.78□□□□□ -0.84
PNKP-228ENST00000637325 NACAE9PAV3 2078 aa9.78□□□□□ -0.84
PNKP-228ENST00000637325 TRAV12-3A0A0B4J271 114 aa9.78□□□□□ -0.84
PNKP-228ENST00000637325 PLAC8L1A1L4L8 177 aa9.78□□□□□ -0.84
PNKP-228ENST00000637325 TAS2R45P59539 299 aa9.78□□□□□ -0.84
PNKP-228ENST00000637325 TMEM88Q6PEY1 159 aa9.78□□□□□ -0.84
PNKP-228ENST00000637325 POM121L12Q8N7R1 296 aa9.78□□□□□ -0.84
PNKP-228ENST00000637325 FXYD5Q96DB9 178 aa9.78□□□□□ -0.84
PNKP-228ENST00000637325 NOP10Q9NPE3 64 aaKnown RBP9.78□□□□□ -0.84
PNKP-228ENST00000637325 F5H768 121 aa9.77□□□□□ -0.85
PNKP-228ENST00000637325 SLC25A5P05141 298 aaKnown RBP9.77□□□□□ -0.85
PNKP-228ENST00000637325 CSN1S1P47710 185 aa9.77□□□□□ -0.85
PNKP-228ENST00000637325 ACOT6Q3I5F7 207 aaPredicted RBP9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms