RNA–Protein interactions for RNA: ENST00000637223.1

CLN6-218, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-218ENST00000637223 NDUFB4O95168 129 aa12.64□□□□□ -0.39
CLN6-218ENST00000637223 NBEAP1P0C6P0 100 aa12.64□□□□□ -0.39
CLN6-218ENST00000637223 NHLRC4P0CG21 123 aaPredicted RBP12.64□□□□□ -0.39
CLN6-218ENST00000637223 FAM74A1Q5RGS3 127 aa12.64□□□□□ -0.39
CLN6-218ENST00000637223 EBLN2Q6P2I7 272 aa12.64□□□□□ -0.39
CLN6-218ENST00000637223 LYPD6BQ8NI32 183 aa12.64□□□□□ -0.39
CLN6-218ENST00000637223 TM2D3Q9BRN9 247 aa12.64□□□□□ -0.39
CLN6-218ENST00000637223 ACTR3CQ9C0K3 210 aaPredicted RBP12.64□□□□□ -0.39
CLN6-218ENST00000637223 COL7A1Q02388 2944 aa12.64□□□□□ -0.39
CLN6-218ENST00000637223 KIR2DL5BA0A0G2JN68 375 aa12.63□□□□□ -0.39
CLN6-218ENST00000637223 KIR2DL5BA0A0G2JPC4 375 aa12.63□□□□□ -0.39
CLN6-218ENST00000637223 A0A0J9YX75 114 aa12.63□□□□□ -0.39
CLN6-218ENST00000637223 ZNF705FA8MVS1 300 aaPredicted RBP12.63□□□□□ -0.39
CLN6-218ENST00000637223 ZNF253O75346 499 aa12.63□□□□□ -0.39
CLN6-218ENST00000637223 ZNF705DP0CH99 300 aaPredicted RBP12.63□□□□□ -0.39
CLN6-218ENST00000637223 ZNF705BP0CI00 300 aaPredicted RBP12.63□□□□□ -0.39
CLN6-218ENST00000637223 PDE6HQ13956 83 aa12.63□□□□□ -0.39
CLN6-218ENST00000637223 SSX7Q7RTT5 188 aa12.63□□□□□ -0.39
CLN6-218ENST00000637223 KIR2DL5AQ8N109 375 aa12.63□□□□□ -0.39
CLN6-218ENST00000637223 OR4B1Q8NGF8 309 aa12.63□□□□□ -0.39
CLN6-218ENST00000637223 KIR2DL5BQ8NHK3 375 aa12.63□□□□□ -0.39
CLN6-218ENST00000637223 RPUSD4Q96CM3 377 aaKnown RBP12.63□□□□□ -0.39
CLN6-218ENST00000637223 CSTL1Q9H114 145 aa12.63□□□□□ -0.39
CLN6-218ENST00000637223 ZMAT4Q9H898 229 aa12.63□□□□□ -0.39
CLN6-218ENST00000637223 PLA2G2EQ9NZK7 142 aa12.63□□□□□ -0.39
CLN6-218ENST00000637223 HUWE1Q7Z6Z7 4374 aaKnown RBP12.62□□□□□ -0.39
CLN6-218ENST00000637223 TRAV1-1A0A0B4J248 108 aa12.62□□□□□ -0.39
CLN6-218ENST00000637223 TEX46H3BTG2 121 aa12.62□□□□□ -0.39
CLN6-218ENST00000637223 CA1P00915 261 aaPredicted RBP12.62□□□□□ -0.39
CLN6-218ENST00000637223 STAG3L2P0CL84 134 aa12.62□□□□□ -0.39
CLN6-218ENST00000637223 STAG3L3P0CL85 134 aa12.62□□□□□ -0.39
CLN6-218ENST00000637223 ARL14EPLP0DKL9 152 aa12.62□□□□□ -0.39
CLN6-218ENST00000637223 PSG9Q00887 426 aa12.62□□□□□ -0.39
CLN6-218ENST00000637223 ZNF726P1Q15940 193 aa12.62□□□□□ -0.39
CLN6-218ENST00000637223 PQLC2Q6ZP29 291 aa12.62□□□□□ -0.39
CLN6-218ENST00000637223 EXOC3-AS1Q8N2X6 119 aa12.62□□□□□ -0.39
CLN6-218ENST00000637223 SPATA25Q9BR10 227 aa12.62□□□□□ -0.39
CLN6-218ENST00000637223 PRAC2D3DTV9 90 aa12.61□□□□□ -0.39
CLN6-218ENST00000637223 UBE2CO00762 179 aa12.61□□□□□ -0.39
CLN6-218ENST00000637223 HIST1H1AQ02539 215 aaPredicted RBP12.61□□□□□ -0.39
CLN6-218ENST00000637223 EIF4E3Q8N5X7 224 aaKnown RBP12.61□□□□□ -0.39
CLN6-218ENST00000637223 OR8A1Q8NGG7 326 aa12.61□□□□□ -0.39
CLN6-218ENST00000637223 CTXND1A0A1B0GTU2 59 aa12.6□□□□□ -0.39
CLN6-218ENST00000637223 M0R3E3 92 aa12.6□□□□□ -0.39
CLN6-218ENST00000637223 HBE1P02100 147 aa12.6□□□□□ -0.39
CLN6-218ENST00000637223 CNN1P51911 297 aaKnown RBP12.6□□□□□ -0.39
CLN6-218ENST00000637223 FXYD7P58549 80 aa12.6□□□□□ -0.39
CLN6-218ENST00000637223 RANP62826 216 aaKnown RBP12.6□□□□□ -0.39
CLN6-218ENST00000637223 ICAM4Q14773 271 aa12.6□□□□□ -0.39
CLN6-218ENST00000637223 DEFB135Q30KP9 77 aa12.6□□□□□ -0.39
CLN6-218ENST00000637223 MORN3Q6PF18 240 aaPredicted RBP12.6□□□□□ -0.39
CLN6-218ENST00000637223 AAMDCQ9H7C9 122 aa12.6□□□□□ -0.39
CLN6-218ENST00000637223 CLEC5AQ9NY25 188 aa12.6□□□□□ -0.39
CLN6-218ENST00000637223 DUSP14O95147 198 aaKnown RBP12.59□□□□□ -0.39
CLN6-218ENST00000637223 CXorf1O96002 111 aa12.59□□□□□ -0.39
CLN6-218ENST00000637223 GIG44P09565 113 aaPredicted RBP12.59□□□□□ -0.39
CLN6-218ENST00000637223 GCHFRP30047 84 aa12.59□□□□□ -0.39
CLN6-218ENST00000637223 FHITP49789 147 aa12.59□□□□□ -0.39
CLN6-218ENST00000637223 IQCF2Q8IXL9 164 aa12.59□□□□□ -0.39
CLN6-218ENST00000637223 MBD3L1Q8WWY6 194 aa12.59□□□□□ -0.39
CLN6-218ENST00000637223 RCHY1Q96PM5 261 aa12.59□□□□□ -0.39
CLN6-218ENST00000637223 RAB19A4D1S5 217 aa12.58□□□□□ -0.4
CLN6-218ENST00000637223 PMS2P11Q13670 270 aa12.58□□□□□ -0.4
CLN6-218ENST00000637223 Q6ZWC4 215 aa12.58□□□□□ -0.4
CLN6-218ENST00000637223 FAM213BQ8TBF2 198 aa12.58□□□□□ -0.4
CLN6-218ENST00000637223 OVOL2Q9BRP0 275 aa12.58□□□□□ -0.4
CLN6-218ENST00000637223 SLC35B3Q9H1N7 401 aa12.58□□□□□ -0.4
CLN6-218ENST00000637223 Q9H3A6 140 aa12.58□□□□□ -0.4
CLN6-218ENST00000637223 PRELID1Q9Y255 219 aa12.58□□□□□ -0.4
CLN6-218ENST00000637223 U3KQK5 164 aa12.58□□□□□ -0.4
CLN6-218ENST00000637223 H2AFB1P0C5Y9 115 aa12.57□□□□□ -0.4
CLN6-218ENST00000637223 FGF8P55075 233 aaPredicted RBP12.57□□□□□ -0.4
CLN6-218ENST00000637223 NUTF2P61970 127 aaKnown RBP12.57□□□□□ -0.4
CLN6-218ENST00000637223 UQCC3Q6UW78 93 aa12.57□□□□□ -0.4
CLN6-218ENST00000637223 OR10J6PQ8NGY7 276 aa12.57□□□□□ -0.4
CLN6-218ENST00000637223 MRPL53Q96EL3 112 aaKnown RBP12.57□□□□□ -0.4
CLN6-218ENST00000637223 XCL2Q9UBD3 114 aa12.57□□□□□ -0.4
CLN6-218ENST00000637223 BIRC6Q9NR09 4857 aa12.56□□□□□ -0.4
CLN6-218ENST00000637223 MAP1LC3B2A6NCE7 125 aa12.56□□□□□ -0.4
CLN6-218ENST00000637223 A8MTW9 85 aa12.56□□□□□ -0.4
CLN6-218ENST00000637223 SPRY2O43597 315 aa12.56□□□□□ -0.4
CLN6-218ENST00000637223 AMTNQ6UX39 209 aa12.56□□□□□ -0.4
CLN6-218ENST00000637223 LYPD1Q8N2G4 141 aa12.56□□□□□ -0.4
CLN6-218ENST00000637223 RNF183Q96D59 192 aa12.56□□□□□ -0.4
CLN6-218ENST00000637223 CLUHP3Q96NS8 147 aa12.56□□□□□ -0.4
CLN6-218ENST00000637223 MAP1LC3BQ9GZQ8 125 aa12.56□□□□□ -0.4
CLN6-218ENST00000637223 TMPRSS5Q9H3S3 457 aa12.56□□□□□ -0.4
CLN6-218ENST00000637223 TMEM167BQ9NRX6 74 aa12.56□□□□□ -0.4
CLN6-218ENST00000637223 EPPK1P58107 5090 aaKnown RBP12.56□□□□□ -0.4
CLN6-218ENST00000637223 COMMD7Q86VX2 200 aa12.55□□□□□ -0.4
CLN6-218ENST00000637223 SMDT1Q9H4I9 107 aa12.55□□□□□ -0.4
CLN6-218ENST00000637223 OTORQ9NRC9 128 aa12.55□□□□□ -0.4
CLN6-218ENST00000637223 PPP1R14DQ9NXH3 145 aa12.55□□□□□ -0.4
CLN6-218ENST00000637223 TP53TG1Q9Y2A0 90 aa12.55□□□□□ -0.4
CLN6-218ENST00000637223 IGKV2-40A0A087WW87 121 aaPredicted RBP12.54□□□□□ -0.4
CLN6-218ENST00000637223 PGPA6NDG6 321 aa12.54□□□□□ -0.4
CLN6-218ENST00000637223 IGKV2D-40P01614 121 aaPredicted RBP12.54□□□□□ -0.4
CLN6-218ENST00000637223 S100A1P23297 94 aa12.54□□□□□ -0.4
CLN6-218ENST00000637223 TAGLN2P37802 199 aaKnown RBP12.54□□□□□ -0.4
CLN6-218ENST00000637223 ERCC8Q13216 396 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms